Helicobacter cinaedi PAGU611: HCN_0318
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Entry
HCN_0318 CDS
T02034
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp00730
Thiamine metabolism
hcp00900
Terpenoid backbone biosynthesis
hcp01100
Metabolic pathways
hcp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HCN_0318 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HCN_0318 (dxs)
Enzymes [BR:
hcp01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
HCN_0318 (dxs)
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
PFOR_II
Transketolase_N
TatD_DNase
TPP_enzyme_C
DUF3097_N
Motif
Other DBs
NCBI-ProteinID:
BAM11630
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Position
322528..324447
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AA seq
639 aa
AA seq
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MEMAKVSALNETKDLDSRALDVCLAKESVFDTLRTMSLDELKSVATCIRKRILEVVSTNG
GHLSSTLGAVDLIIGMHAVFDATKHPFIFDVSHQAYAHKILTGRFSEFSTLRQYGGISGF
CHPKESASDYFIAGHSSTSISLGVGAAKARALQNNEYMPVIMIGDGSMSAGLVYEALNEL
GDRKYPMVIVLNDNEMSIAKPIGAISNYLSQILTTPLYQKTRHSIKKVLQKMPDSATYLA
KRFEESLKLITPGILFEELGLDYVGPIDGHNIELIINTLQRAKEMKKPVIIHAQTLKGKG
YEIAEGHFEQWHGVAPFDISTGSVIKKSTQIAPTAVFSKALESCCNDELVVGITAAMPSG
TGMDRLIEKYPQRFWDVAICEAHGVTSMAAMAKEGYKPFVAIYSTFLQRAYDQLIHDVGI
LGLPVRFCIDRAGIVGEDGETHQGLFDIAYLRSIPNFVLFAPRDNASLAQAVDFAYHCDN
APCAFRYPRSKFVLEDGVFESRAFELGKAELLIQGEKILLIGYGNGVGRAYYVRESLREF
GLNPTLLDLRFVKPLDKERLKILCQSHTHICVLSDSYAMGGVGSALLEFMAEENLLNVAF
KSFEIQDSFIPHGNSGIVESALGLGTQSLADSIKQWVGV
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggcaaaggtgtcggcattgaatgagacaaaggatttagattctagggcgtta
gatgtgtgtctagccaaagagagtgtgtttgataccttgcggacaatgtctttagatgag
cttaaaagcgtggcaacctgtattcgcaaaagaatcttagaagtggtgagcaccaatggc
ggacatttaagctccacacttggagcggtagatttgattataggtatgcacgccgtcttt
gatgcaacaaagcacccttttatctttgatgtgtctcatcaagcttacgcacataagatt
ctaaccgggcgttttagtgagtttagcacacttcggcagtatgggggtataagtggattt
tgccaccctaaagaatctgcgagtgattattttatcgctgggcatagctctacttctatt
tctttgggcgttggggcggctaaggctagggcgttacaaaataatgaatatatgcctgtg
attatgataggcgatgggtcaatgagtgcggggctcgtgtatgaagcactcaatgaacta
ggcgatagaaaatacccaatggtgattgttttaaatgataatgagatgagtatcgctaag
cccataggtgcaataagcaactatctttcacagattcttactactccgctgtatcaaaaa
acacgccatagcattaaaaaagtcttacaaaaaatgccggattcagcgacttaccttgct
aaacgctttgaagaatctttgaagctcatcacgcccgggattttgtttgaagagctaggg
cttgattatgtaggtcccattgatgggcataatattgaactcattatcaatacactacaa
agggcaaaagagatgaaaaagcccgtgattatccacgcccaaacgcttaaaggcaagggg
tatgagatagctgaagggcattttgagcagtggcacggcgtagctccttttgatataagc
accggctctgtgattaaaaaatccactcaaatcgccccaacagcggtcttttcaaaggct
ttagaatcctgttgcaatgatgaattggtcgtaggcattaccgcagctatgccaagcggg
acgggaatggatagactgattgaaaaatatccgcaaagattctgggatgtggcgatttgc
gaggctcacggggttacttcaatggcggcaatggcaaaggagggctataagccatttgtg
gcgatttactctacttttttgcagcgtgcgtatgatcagctgatacacgatgttggaatc
ttagggttgcctgtgcgattttgcattgatagggcggggattgtgggtgaagatggcgag
acacatcaaggactatttgatattgcctacttacgctctattcctaactttgtgcttttt
gccccacgcgataatgcaagtttagctcaagcagttgactttgcctatcattgcgataat
gccccttgtgcctttcgctatccgcgttcaaaatttgtgttagaagatggcgtgtttgaa
tctagggcatttgagctaggcaaggcggagctactcattcaaggagaaaagattctgctt
ataggctatgggaatggcgtaggcagagcgtattatgtgcgagaatctttgcgtgaattt
gggctaaatcctaccttgcttgatttgcgttttgtaaagccccttgacaaagagaggctt
aaaattttgtgtcaaagccatacgcatatttgcgtgttgagtgatagctatgctatgggc
ggtgtggggagtgctttgcttgagtttatggcggaagaaaatctgctgaatgtggcattt
aaaagctttgaaatacaagatagctttattccccacggcaatagtggtattgtagaatct
gctcttgggctaggaacgcaaagcctagcagattctattaaacaatgggttggcgtatag
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