Helicobacter cinaedi PAGU611: HCN_0332
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Entry
HCN_0332 CDS
T02034
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hcp
Helicobacter cinaedi PAGU611
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcp03400
]
HCN_0332
DNA repair and recombination proteins [BR:
hcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HCN_0332
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
Zn_ribbon_LapB
ChlI
Lon_C
AAA_22
ABC_tran
NTPase_1
AAA_24
Rad51
AAA_14
AAA
AAA_16
RsgA_GTPase
SLFN-g3_helicase
ATPase_2
AAA_23
DUF7129
nSTAND3
NACHT
zf-C2H2_2nd_ZNF462
Zeta_toxin
AAA_19
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAM11643
LinkDB
All DBs
Position
complement(338995..340332)
Genome browser
AA seq
445 aa
AA seq
DB search
MAKKSVVFECQFCGWQSPKWLGKCSSCGSWDSLVELKGEMKKYSLASQNHNPTTHAIPIT
EVQFESIQHFTSYEEELDIVLGGGIVPGGLYLIGGSPGVGKSTLLLKIAGNLAEKSALKI
LYVSGEESAGQIKMRSTRLGAVSENLFLLNEIDLSSITQALNERKYSLCVIDSIQTIYSP
EITSAPGSVSQVREVTFALMRLAKERNISIFIIGHITKEGSIAGPRILEHMVDCVLYFEG
DPSKELRMLRGFKNRFGTTSEIGIFEMKECGLVSAKNASRLFFNQRSAQAGSAVAVLLEG
SRAIIIEIQALVSESAYPKRSCTGFDTNRLNMLLALLERKLDMPLGRYDVFVNVVGGIKI
SEPSADLAVIASIVSSFKNRPLSPKTAFVGEVSLVGDIREVSNIEIRLKELENYGFEKVI
LAKKPKNATIKCFEANEVSKILEWM
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaaaagtgtagtttttgaatgtcaattttgcggttggcaaagcccaaagtgg
cttggaaaatgtagcagttgcgggagttgggatagtttagttgagcttaaaggtgaaatg
aaaaaatatagccttgcaagtcaaaatcacaatcccacaacccacgctattcccattaca
gaagttcaatttgaatctattcagcatttcacttcctatgaagaagagcttgatattgtg
cttggtgggggcattgtgcccggtgggctataccttatcggtggcagtccgggtgttggc
aaatctacacttttattaaaaattgcaggaaatttagcagaaaaatcagcccttaagatt
ctctatgtgagtggggaagagagtgctgggcagattaaaatgcgttccactcggctgggt
gctgtaagtgaaaatctctttttgctcaatgaaattgatttaagtagcattacacaagct
ctaaatgagcggaaatacagcctatgcgtgatagattctatccaaacgatatattccccg
gaaatcacttccgcacccggtagtgtttcacaagtgcgtgaagttacctttgcacttatg
cggttagcaaaggagcgaaatatcagcatttttatcatcgggcatatcacaaaggaaggc
tccattgccggacctagaatcttggagcatatggtagattgtgtgctgtattttgaaggt
gatccaagcaaagaactaagaatgctaaggggctttaaaaatcgctttggcacaacaagt
gaaattggaatctttgagatgaaagaatgtgggcttgtgagtgccaaaaacgcttcaagg
ctttttttcaatcagcgttcagcccaagctggaagtgctgtggctgtgctacttgagggg
agtagagctattatcattgagattcaagcccttgtgagtgaatctgcctatcctaaacgc
tcttgcacaggctttgatactaaccgcttgaatatgcttttagctcttttggagcgaaaa
cttgatatgccacttggacgatatgatgtatttgtcaatgtcgtaggtggcataaagata
agtgagccaagtgcggatttagccgttattgcaagtattgtctcaagctttaaaaatcgt
ccgcttagtcctaaaactgcctttgtgggcgaagtttcacttgtaggcgatatacgcgaa
gttagcaatattgagataaggctaaaagagctagaaaactatggatttgaaaaagttatc
cttgctaaaaagcccaaaaatgccacaatcaaatgctttgaagcaaatgaggtaagcaag
attctagagtggatgtag
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