Helicobacter cinaedi PAGU611: HCN_0339
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Entry
HCN_0339 CDS
T02034
Name
(GenBank) transcriptional regulator
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
hcp
Helicobacter cinaedi PAGU611
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcp03016
]
HCN_0339
Transfer RNA biogenesis [BR:
hcp03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
HCN_0339
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Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
NanE
Rrn6_HB
Oxidored_FMN
DUF1031
Motif
Other DBs
NCBI-ProteinID:
BAM11649
UniProt:
A0A809NCQ1
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All DBs
Position
complement(346008..346994)
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AA seq
328 aa
AA seq
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MIEFKNLLMLAPLAGYTDLPFRSVVKDFGVDITVSEMISSHALVYSNKRTLKMTEKSPQE
QPYSVQISGSKEEVIKQAVEILNTQKDIDIIDLNCGCPAPKVANHGNGSGLLKDLNLLVK
IANLIKENAKTPYTSLKVRLGFDKKIPHEIAQALKDVKSDFVVVHGRTRADGYKKEKIDY
DAIAYIKQNIPMPLIANGEIDSVEKAQKVLEHTGANGVMIGRAAITSPWIFWQIKNNTQE
IPPIVKKELVLEHFHKMIEFYGERGAIMFRKNLHAYTKGHEGASEFRNLINSLSDVKQIT
QHIENFFSHNQMITHNFPQLVHLNKRSS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttaagaatcttttgatgttagcccctcttgcaggttatacagatttgcct
tttcgtagcgtggttaaggactttggcgtggatataaccgtaagtgagatgataagctct
cacgcccttgtatatagcaataaacgcacgctcaaaatgactgaaaaatccccacaagag
cagccttatagtgtgcaaatctctggctcaaaagaagaggttatcaaacaagcagttgag
attctaaacactcaaaaggacattgatataattgatctaaattgtggctgccccgcccca
aaggtcgcaaatcacggcaatggaagcggacttctaaaagatttaaatctgttagtcaaa
attgctaatctcattaaagaaaacgctaaaacgccctacacaagtctaaaagtccgcctt
ggctttgataaaaagattccccacgagatagcccaagccctaaaagatgtgaagtctgat
tttgtcgtggtgcacggacgcacgagagcagatggttacaaaaaagaaaagattgattat
gatgccatcgcgtatattaagcaaaatattcctatgccccttattgctaatggcgagatt
gatagtgtggaaaaagcccaaaaggtgctagagcataccggtgcaaatggtgtgatgata
ggacgggccgctattacttcgccgtggattttctggcagattaaaaacaatacgcaggaa
atcccacccattgtcaaaaaagaacttgtattggagcattttcataaaatgatagaattt
tatggggaaaggggggcgattatgtttcgcaagaatctccacgcctacaccaaaggacac
gagggggcgagtgagtttaggaatcttatcaatagcttaagtgatgtaaagcaaatcaca
caacatattgaaaatttcttttcacataatcaaatgataacgcataacttcccccaactc
gtgcatctcaacaaaaggagtagctag
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