Helicobacter cinaedi PAGU611: HCN_0404
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Entry
HCN_0404 CDS
T02034
Name
(GenBank) soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hcp
Helicobacter cinaedi PAGU611
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hcp01011
]
HCN_0404
Enzymes [BR:
hcp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HCN_0404
Peptidoglycan biosynthesis and degradation proteins [BR:
hcp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HCN_0404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
BAM11707
LinkDB
All DBs
Position
complement(413852..415480)
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AA seq
542 aa
AA seq
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MRSLILLLLALCIGFAKTDIILEFLESKPKGLARDFYIWQFLSNEHTSLQDALKAYELIH
RKTSKLDSLMSAKGKVSELPRKLYCQRLSFESLKKQDKDCIKSGLNLANVPTMPQKNKDF
LLKTFQNDPTYKKRIEILSKPNILTGMLNSDAATFAALYYTLRDNQRLQIINQTIKPQAL
KKFADENNKSFNNMLQKIIVTHDNSYAKFKKSLIGAKITGADSYTLFLLGLNEILHQKPK
AALEYFRLSSKNAPTAMQKNRALFWEYSLSHDNKVLENLASSTNVDLYTIYANQKLGVKP
SYEVVTDLGKLSPKKPDFDIKDPFQWQLLKDNLSQVKSDKDLEELSKHFTYEDTSAHLAY
VLNQLNKFKIHYFITPFSDKLKWKSDHEKAFTYAIAKQESTLLPALVSTSYALGMMQIMP
FNVEPFAKSLKRDNITLEDMFNPITALEFGTFYLNDLGREFKHPLFVSYAYNGGPGFLRR
TLKTKKFFLKNRNYEPWLSMELIPYKESRDYGFRVLANYIVYQESFGNTINLEEYLKQTL
IN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcttaatcttactgcttttagccctttgtattggttttgccaaaacggatatt
atacttgaatttttagaatctaagccaaaaggcttggcaagggatttttacatctggcaa
tttttatcaaatgagcatacttcattgcaagatgcactcaaagcctatgagcttatccac
cgcaaaacttcaaagcttgatagccttatgagtgccaaaggaaaagtcagcgaactccca
cgcaaactttattgccaacgcttgagctttgaaagtctaaaaaagcaagacaaagattgt
ataaaatcagggctaaatctcgctaatgtccccacaatgccacagaaaaataaagacttt
ttgctcaaaacctttcaaaatgatcctacatacaaaaaacgcattgagattctaagcaaa
ccaaatatcctaacaggtatgctaaatagcgatgcggcgacttttgcagccttgtattat
acactaagagataaccaacgcttacagattatcaatcaaaccattaaaccccaagccctt
aaaaaatttgctgatgaaaataataaatcttttaacaatatgctacaaaaaatcatcgtt
acccacgataacagctatgcaaagtttaaaaaatcgcttatcggtgcaaaaattacagga
gcagattcttacacactttttttgctagggcttaatgagattttacatcaaaagcccaaa
gcggcattagaatattttagactttcaagtaaaaatgccccaacagctatgcaaaaaaat
cgtgctttgttttgggaatactccctaagccacgataacaaagtcttagagaatcttgct
tcaagcacaaatgtggatctctacaccatttatgctaatcaaaagttaggcgtaaaacca
agctacgaagtagtaacagatttaggcaaactctcacctaaaaagcctgattttgacatt
aaagacccattccaatggcaacttttaaaagataatctctcgcaagttaagagtgataaa
gacttagaagagttaagcaaacatttcacctatgaagatacaagcgcacatcttgcgtat
gttttaaatcagctcaataaatttaagattcactattttatcacgccttttagcgacaag
cttaagtggaaaagtgatcacgaaaaagcctttacctatgctattgccaagcaggaaagc
acccttttgcccgctcttgtctcgacttcttatgctttgggtatgatgcaaattatgcct
tttaatgtagagccttttgccaaaagcttaaaacgcgacaatatcacgcttgaagatatg
tttaaccccataaccgccctagaatttgggacattctatcttaatgatttgggcagggag
tttaaacatccgctttttgtatcttatgcttacaatggtggtccgggctttttacgccgc
acattaaaaacaaaaaaattctttttgaaaaatcgcaactacgagccgtggctctctatg
gaacttatcccctataaagaatcccgtgattatggctttagagttttagcaaattatatt
gtttatcaagagagttttggcaatactatcaatcttgaagaatatctcaagcaaacactt
atcaattaa
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