Helicobacter cinaedi PAGU611: HCN_0482
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Entry
HCN_0482 CDS
T02034
Symbol
truD
Name
(GenBank) putative tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hcp
Helicobacter cinaedi PAGU611
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcp03016
]
HCN_0482 (truD)
Enzymes [BR:
hcp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HCN_0482 (truD)
Transfer RNA biogenesis [BR:
hcp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HCN_0482 (truD)
Prokaryotic type
HCN_0482 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BAM11774
LinkDB
All DBs
Position
complement(500280..501284)
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AA seq
334 aa
AA seq
DB search
MLIYVRKKGLSTFEMLELFSQILGIKVRDIGYAGLKDKAATTYQYISIPRHLESRLNLIS
PILQEHNIKILNLHAHNNKLKIGHLKGNEFFMRLKKLLPHNATKLESTLELIAQSGFPNY
FGDQRFGKEGDNFQSGKAIIQNSLKIKNKKMSNFLISSYQSHLFNAWLKTRLQFSQILHS
FSPNEVLNALFHDDFKAMHSPHYTLNLIKTLQKQKQHFVLLQGDVMCHYPYGKNFICEDE
IAESQRFILKNTAPTGALCGLKLTHAHNLAKDIESHFLDSAIKANGTRRYAWVWAEQIKG
KYIAEKAQYELQFYLPKGSYATIFLESLLGQQNL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttgctaatttatgtgcgaaaaaagggcttaagcacctttgaaatgcttgaacttttctcg
cagattctaggtataaaagtgcgtgatataggctatgcagggctaaaagacaaagccgct
accacctatcaatacatcagcattcctcgccatttagaatctcgcctaaatctcatctcg
cctattttgcaagagcataacattaagattctaaatctccacgcccataacaacaagctc
aaaatcgggcatttgaaaggcaatgaattttttatgcgtcttaaaaagctcctaccgcat
aatgctacaaagctagaatccacacttgaactcatcgctcaaagtggctttccaaactat
tttggcgaccaacgctttggcaaagagggagataatttccaaagtggtaaggcaattatc
caaaatagtcttaaaatcaaaaataaaaagatgagtaattttctcatctccagctatcaa
agccacctttttaacgcttggttaaaaacgcgtttgcagttttcacagattttgcatagc
tttagcccaaacgaagtcctaaacgctcttttccacgatgattttaaagccatgcatagc
ccacactacacgctaaatctcataaaaaccctgcaaaaacaaaaacaacattttgtgctt
ttgcaaggtgatgtgatgtgccattatccctatggcaaaaactttatctgcgaagatgaa
atagcagaatcccagcgttttatacttaaaaataccgctccaacaggggcattatgcggc
ttaaagctcactcacgcacacaatctagccaaagacatagaatctcactttttagattct
gctatcaaggcaaatggcacaagacgctatgcgtgggtatgggcagagcaaattaaaggc
aaatatatcgcggaaaaagcccaatacgagctacaattctacttgccaaaggggagctat
gcgactatttttttagaaagtttgctagggcaacagaatctttag
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