Helicobacter cinaedi PAGU611: HCN_0540
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Entry
HCN_0540 CDS
T02034
Name
(GenBank) hypothetical protein
Organism
hcp
Helicobacter cinaedi PAGU611
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
DEAD
ResIII
PhoH
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BAM11828
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Position
559580..561280
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AA seq
566 aa
AA seq
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MLQNGGSMSEIKKRLCDGAKQYYEYLSSHNLGLSEIPISVPTLQDDTLILSLRGNVADMD
LKLSSALILDIDSMHYMVGDEENIELQYYDERQKVVYLTLDSTLKESVKKNLKKLRLFSD
LKFLVKNVEEFFENFGDRLKLPTYIESSVIPIIPTLSDEQNQALKVVLSEPLSYVWGPPG
TGKTQKVLFEAILHYMRQGKRVAVVTTTNNALEQVLITLIKQFDTLGLDRSSILRLGTPT
MGYMNAYWQTCDPSLLQQKGATNLFNFQDTLKTRLKTTCVVGVTLDGFIKRYESLELSFS
HIFLDECAYAPLTKTCALCVEGTPLAFFGDHKQLFPVCEMPKTALMQQENENAFVWNLSA
LFLESFFNGEKPKNLAQAYEQSGEIPQYRQMRCVNLSRTHRYGDNLAQILDRYVYRIGLR
GKDEPMEIFAIDSGAKQEIETQISQSEVRVCEILSTKLKTSEYAIITPFVKQRQKLGLKI
PRDRIFTIHGSQGQEFDNVIFSPVSLHYHLTNSYQTHALYALNVAISRVKKRLFVVCDYA
FWSRQKGQLLSEILQQAQLITLEDLL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtgttacaaaatggtggcagtatgagtgagataaaaaagcggctatgcgatggggcaaag
cagtattatgagtatctttcatcgcataatctgggtttgagtgaaatccccattagtgtg
ccgacattgcaagatgatacgcttattctttcacttagaggcaatgtggcggatatggat
ttgaagcttagtagtgctttgattttggatatagattctatgcattatatggtgggcgat
gaagagaatattgagctgcaatattatgatgagcgtcaaaaggttgtgtatctcacgcta
gattctacactcaaagagagcgtgaaaaaaaatctaaaaaagcttagactttttagcgat
ttgaagtttttggttaaaaatgtggaagagttttttgaaaattttggcgataggctaaag
ctacctacatatatagaatctagcgttattcccattatccccactttgagtgatgagcaa
aatcaagccttaaaagtcgtgctaagtgagcctttaagctatgtatggggaccaccggga
acgggtaaaacgcaaaaggtgctgtttgaagcgattttgcattatatgaggcagggtaaa
agagtggcggttgtaacaacgacaaataatgctttggagcaggtgcttattacgctgatt
aagcaatttgatacgctagggctagatagaagcagtattttgcggcttggcacaccaact
atgggctatatgaatgcgtattggcagacttgcgatcctagcctgttgcaacaaaaggga
gcaacgaatctttttaattttcaagatacgcttaaaactcgcttgaaaaccacttgtgtg
gtgggcgtaacccttgatggctttatcaagcgatatgagagtttggagctaagttttagc
catatttttttagatgaatgtgcgtatgcaccgctgactaaaacctgtgcgttgtgtgtg
gaaggcacaccactcgcattttttggcgatcataagcagctgtttcccgtatgcgaaatg
cctaaaaccgcccttatgcaacaagagaatgaaaatgcgtttgtgtggaatctctctgct
ttgtttttggaatctttttttaatggcgaaaagcctaaaaatctcgcacaagcgtatgag
caaagtggagaaatcccacaatataggcaaatgcgatgtgtaaatctaagtcgcacacat
cgctatggggataatctcgcacagattttggatagatatgtatatcgtatcgggttaagg
ggcaaagatgagcctatggagatttttgccattgatagtggagcaaagcaagagatagag
acacaaatcagtcaaagtgaagtgagggtgtgtgagattctaagcacaaagctaaaaacg
agtgaatatgctatcatcacgccctttgtgaagcaaagacaaaaacttgggcttaaaatc
ccacgcgataggatttttaccattcatggctcacaaggacaggagtttgataatgtcatc
ttttcaccggtgagtttgcactatcatttgacaaattcatatcaaacccacgccctttat
gccctaaatgtagctatatcgcgtgtgaaaaagcgactttttgtcgtgtgcgattatgcc
ttttggagtaggcaaaaaggacagcttttatcagagatcttgcaacaagctcaacttatc
actttagaggacttattatga
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