Helicobacter cinaedi PAGU611: HCN_0778
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Entry
HCN_0778 CDS
T02034
Name
(GenBank) TPR repeat-containing protein
Organism
hcp
Helicobacter cinaedi PAGU611
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_7
TPR_16
TPR_19
TPR_14
TPR_12
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_15
TPR_20
ANAPC3
Glyco_transf_9
HAT_Syf1_CNRKL1_C
ARM_TT21_5th
Motif
Other DBs
NCBI-ProteinID:
BAM12038
LinkDB
All DBs
Position
781956..783590
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AA seq
544 aa
AA seq
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MSQQSFNIASAVHSAFRLYEESQYHECMDICIQILGIDCTRADIWSLAGIVMLKLEMYEK
AVEYFTQASNFAPNDFSHRINLAEAYRRGGNPQASIAELSLLLTQEKVMENNPTLHFNLA
KAYSDIEDSQNSIKHYTIAIKLDPNDLGAMFNLANAQVSLKHFGEAIELYLNALSKGYLD
AGVNLANTYVQIGLFSEALEVYRGIYQYYKDDSDFLFNYANALNYANALPQDTQTLYQQA
IGLNPQKSEYCINYAHFLLKHLDLVNGFRIYEERKKLPNMLPQGITKLWEKGECLSDKNV
LIYHEQGLGDSIMFSRFVPLLQKVAKNVLVLIQEPLLPLFKKFHMPCVCGIAQDLEYDVA
ISLLSLPYALGVSHKQELESLSFCDTPRMETHKIKTYGVKKIGICFSTDSAFPESANKNI
PLEVLMSALRDAQRLGVEIYSINKAHCENLDKFGIIQKPMNDFLQTYEIIKELDLVISID
TAVAHLSGSMGKHTLVLLNKRYDWRWGNGISTPWYENVLCMTQSKMGQWSDVTQNLKSYL
GSYI
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacaaagttttaatatcgcttcagccgtgcattcagcctttaggctttatgag
gaaagccaatatcacgagtgtatggatatttgcattcagattttaggtatagattgcacg
cgtgcagacatttggagtttggcaggtattgttatgctaaagcttgaaatgtatgaaaaa
gcggtggaatactttacccaagcctcaaattttgccccaaatgactttagccataggata
aatctcgcagaagcctaccgccgcggtgggaatccacaggcgagtattgctgaacttagc
ttacttttaacgcaagaaaaggtaatggaaaataatccaaccttgcattttaaccttgca
aaagcctattctgatattgaagattcacaaaactccattaaacactacactatcgctatt
aagcttgatcccaacgatttgggagcgatgtttaatctcgccaacgcacaagtgagcttg
aagcattttggggaggcaattgagctgtatttgaacgctttaagcaaaggctatcttgat
gcgggtgtgaatctggctaatacttatgtgcaaattgggctttttagcgaggcattggag
gtgtatcgtggcatttatcaatactacaaagatgatagtgattttttgtttaactatgct
aatgcgttaaattacgcaaatgctctgccccaagatacgcaaacactctatcaacaagcc
atagggcttaatccacaaaaaagcgagtattgcattaactacgcacattttttattaaag
catttagatttagtaaatggatttagaatctatgaagagcgtaaaaagctcccaaatatg
cttccacagggcattacaaagctttgggaaaagggcgagtgtttgagtgataaaaatgtg
cttatctatcacgagcaggggcttggagattctattatgtttagtcgctttgtgccacta
ttgcaaaaggttgctaaaaatgtgcttgtgctgatacaagagccgcttttgccacttttt
aaaaagtttcatatgccttgtgtttgtggcattgcacaggacttagaatatgatgtggca
atctcccttctatctttgccctatgcgttaggtgtgtcccataagcaagagctagaatct
ttgtctttttgcgatacgcctagaatggaaactcacaagatcaaaacctatggggtcaaa
aaaatcggcatttgctttagcacagattctgcttttcctgaatctgcgaataagaatatt
ccccttgaagtgctgatgagtgcgttgcgagatgctcaaaggctgggtgttgagatttac
tccattaataaggcacattgtgagaatctagataaatttgggattatccaaaagccaatg
aatgattttttacaaacttatgagattatcaaagagctagatttagtcattagtattgat
actgctgtggcacatttaagtgggagtatggggaaacatacgcttgttttactcaataaa
cgctatgattggcggtggggtaatggtataagtacgccgtggtatgagaatgtgctgtgt
atgacacaaagcaaaatggggcagtggagcgatgtaacgcagaatcttaaatcatatttg
ggaagctatatttag
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