Helicobacter cinaedi PAGU611: HCN_0860
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Entry
HCN_0860 CDS
T02034
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HCN_0860 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hcp01007
]
HCN_0860 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcp03016
]
HCN_0860 (lysS)
Enzymes [BR:
hcp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HCN_0860 (lysS)
Amino acid related enzymes [BR:
hcp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HCN_0860 (lysS)
Transfer RNA biogenesis [BR:
hcp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HCN_0860 (lysS)
Prokaryotic type
Other AARSs
HCN_0860 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAM12114
LinkDB
All DBs
Position
complement(866635..868215)
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AA seq
526 aa
AA seq
DB search
MFSNFYIQQRIKKMQLMREEGLNPYANDTKRTISNNDFLQKYAFLKSQEQGAESADSSST
KSQPIESIVGRVRFIRLMGKACFVKIQDESGVLQAYISKNDVGEDFAYIKKILEVGDIIN
VSGYAFVTKTGELSIHTLSFKILSKSIVPLPEKFHGLSDIELRYRQRYVDLIVNENVKET
FKLRSKIISCVRQFFEKKGFLEVETPMLHPIPGGANARPFITHHNALDVERYLRIAPELY
LKRLIVGGFETIFELNRNFRNEGMDHSHNPEFSMIEFYWAYKTYEDLITLTQELFTYLLE
ELKLPKILKHNDTEIDFSKWQILSYKEALESIGGLDKHIIENKELLLQTLQERHLKIDSS
FSYGKLLGEAFDEFVESKLINPTFITQYPIDISPLARRNDENLEIADRFELFIGGKEIAN
GFSELNDPLDQLERFKEQVKAKDAGDEEAQYMDEDYVWALAHGMPPTAGEGIGIDRLVML
LSDAKSIKDVILFPALKPSKTNFDIMPSDDTAQANQGSPNHANKEK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaatttttacatacagcaacgcattaaaaaaatgcaacttatgcgtgaggag
ggcttgaatccttatgcgaatgacacaaaacgcaccataagcaataatgactttttacaa
aaatatgcttttctaaaatcccaagagcaaggggcagagagtgcagattctagctcaaca
aaatctcaacccatagaatctattgtggggcgagtgcgatttatccgtcttatgggcaag
gcgtgttttgtgaagattcaagatgaaagcggggtgcttcaagcttatatctcaaagaac
gatgtgggcgaagattttgcgtatatcaaaaagatattagaagtgggggatataatcaat
gtatcaggttatgcgtttgtaactaaaaccggggagctaagtatccacacgctaagcttt
aagattctaagcaaaagtatcgtgccactgccggagaaattccacgggctaagcgatata
gagttgcgttaccgccaacgctatgtggatttgattgtaaatgagaatgtcaaagaaacc
tttaaattacgcagtaaaatcatctcgtgtgtgcggcagttttttgaaaaaaaaggattt
ttagaagtagaaacgcctatgcttcacccaatccccggcggtgcaaatgcgcgtcctttt
atcacacatcataatgcccttgatgtggagcggtatttacgcattgccccagagttatat
cttaaaaggcttattgtaggcggatttgaaaccatttttgagctgaatcgtaattttcgc
aacgagggaatggaccactcgcataatcccgaatttagtatgattgaattttactgggcg
tataagacttatgaagatctcatcacactcacccaagagctttttacatatcttttagaa
gagcttaaactccctaagattctaaagcacaacgacacagagattgactttagcaaatgg
cagattctaagctacaaagaagccttagaatccataggcggattagataaacatatcatt
gaaaacaaggaattattgcttcaaacactccaagagagacatctcaagattgatagttct
ttcagctatggaaagcttttgggagaggcatttgatgagtttgtagaatctaaacttatc
aatcccacttttatcacgcaatatcccattgacattagcccacttgcaagacgcaatgat
gagaatctagagattgctgataggtttgagctttttatcggtggtaaggaaatagccaat
ggatttagtgagctaaatgatccacttgaccagcttgagcgttttaaagaacaagtcaag
gcaaaggacgcaggagatgaagaggctcaatatatggacgaagattatgtatgggcttta
gcacacggaatgcccccaactgcgggtgaaggcatagggattgataggctagttatgctt
ttaagcgatgcaaaaagcattaaagatgtgattttattccctgctttaaagccaagtaaa
acaaattttgatataatgccaagcgatgatactgctcaagccaatcaaggaagcccaaat
cacgcaaataaggagaaatga
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