Helicobacter cinaedi PAGU611: HCN_0984
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Entry
HCN_0984 CDS
T02034
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HCN_0984 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hcp01007
]
HCN_0984 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcp03016
]
HCN_0984 (aspS)
03029 Mitochondrial biogenesis [BR:
hcp03029
]
HCN_0984 (aspS)
Enzymes [BR:
hcp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HCN_0984 (aspS)
Amino acid related enzymes [BR:
hcp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HCN_0984 (aspS)
Transfer RNA biogenesis [BR:
hcp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HCN_0984 (aspS)
Prokaryotic type
Other AARSs
HCN_0984 (aspS)
Mitochondrial biogenesis [BR:
hcp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HCN_0984 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
BAM12220
LinkDB
All DBs
Position
1005675..1007414
Genome browser
AA seq
579 aa
AA seq
DB search
MLRTHLCAELNEKHIGKEVQVCGWCNTYRDHGGVIFIDLRDKSGIIQLVCDPNSQAHSIA
SSVRDEYVLIAKGKIRTRGEGLENPKLKTGMIEVVLESLVIENKSPTPPIAIGDESVNEE
LRLKYRYLDLRSPKAYNIFKIRSDAAIAARNSLQKMGFLEVETPILTKATPEGARDYLVP
SRVHSGEFYALPQSPQLFKQLLMMSGFDKYFQIAKCFRDEDLRADRQPEFTQIDIEMSFC
EQNDIITMAETLLQDIFVACGESIQTPFMRMPYTQAMESYGSDKPDLRFEMPLVEVGDLF
LDSNNEIFKNIAKDSKNNRFKALCVKGGDSFFTRKSLGEAEEFVRKFGAKGLAYIQVKEN
ELKGPLVKFISESAMNELISRVEAEPNDIIFFGAGAKKVVWDYMGRLRLKIAMDMNLIDE
NMRKFLWVVDFPMFEKEDGKVKALHHPFTMPKDLDKDDVEEIESIAYDVVLNGIELGGGS
IRIHKDSIQKRVFELLGISNNEAQDKFGFLLEALSFGAPPHGGIAIGFDRLIMLLAKTQS
IRDVIAFPKTQKATCPLTLAPSAVSDEQLRDVHIRLKGE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgttaagaactcatttgtgtgcagaattaaatgaaaaacatattggcaaagaagtgcag
gtatgtggctggtgtaatacttaccgagaccacggcggcgtaatttttattgacttgcgt
gataaaagcgggattatccagcttgtgtgcgacccgaatagtcaggctcatagcattgct
tcaagtgtgcgtgatgaatatgtgcttatcgctaaagggaaaatccgcactcgtggtgaa
gggctagaaaatccaaagctcaaaacgggaatgattgaagtcgtgcttgaaagcctagtg
attgaaaataaatcgcccacacctcccattgccattggcgatgaaagtgtgaatgaagag
ttaaggcttaaatatcgctatttggacttacgctctcctaaagcctataatatttttaaa
atccgctccgatgcggcaatcgcagcaaggaatagcttacaaaaaatgggctttcttgaa
gtggagacacccattctcacaaaggctacacctgaaggagcaagggactatctcgtgcct
tctcgcgtgcattctggcgagttttatgccctgccccaaagcccacagctttttaaacag
ctcctaatgatgagtggctttgataaatattttcaaattgccaaatgctttagagatgag
gatttgcgtgcggatagacagcccgaatttactcaaattgacattgagatgagcttttgt
gagcaaaatgacattattactatggcggagacattattgcaggatatttttgtagcctgt
ggcgaaagcatacaaacgccttttatgcgtatgccttacactcaagcaatggaatcttat
gggagtgataagccggatttacgctttgaaatgccccttgtggaagtcggcgatttattt
ttagattctaataatgagatatttaaaaatatcgctaaagattccaaaaataatcgcttt
aaggcactttgtgtcaaaggtggagatagcttttttacacgcaaaagtttgggcgaggca
gaagagtttgtgcggaagtttggtgctaaaggtttggcatatattcaagtgaaggaaaac
gaattgaaaggtccgcttgtgaaatttatttcagaatctgctatgaatgagcttatctca
cgcgtggaggcggagcctaatgacattattttctttggtgctggggctaaaaaagtcgtg
tgggactatatggggcggttgcgattaaaaattgctatggatatgaatcttattgatgaa
aatatgcggaagtttttgtgggtggtggatttcccaatgtttgaaaaagaagatggcaag
gtcaaagccctgcaccaccctttcacaatgccaaaagatttagacaaagatgatgttgaa
gagatagaatctatcgcctatgatgtggtgctaaatggcattgaactcggcggtggaagc
attagaatccataaagatagcattcaaaaacgcgtgtttgaactgcttggcattagcaat
aatgaagcacaagataagtttggattcttgcttgaagccctaagctttggagcgccacct
cacgggggaattgccataggttttgataggcttattatgcttttagctaaaacgcaaagt
atccgcgatgtgatagctttccctaaaacgcaaaaagctacctgcccacttacccttgcc
ccaagtgcggtaagcgatgagcagctaagagatgttcatatccgccttaaaggggaatga
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