Helicobacter cinaedi PAGU611: HCN_1046
Help
Entry
HCN_1046 CDS
T02034
Symbol
trpA
Name
(GenBank) tryptophan synthase subunit alpha
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp00260
Glycine, serine and threonine metabolism
hcp00400
Phenylalanine, tyrosine and tryptophan biosynthesis
hcp01100
Metabolic pathways
hcp01110
Biosynthesis of secondary metabolites
hcp01230
Biosynthesis of amino acids
Module
hcp_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HCN_1046 (trpA)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
HCN_1046 (trpA)
Enzymes [BR:
hcp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
HCN_1046 (trpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
V-ATPase_H_N
Ribul_P_3_epim
Motif
Other DBs
NCBI-ProteinID:
BAM12277
LinkDB
All DBs
Position
1060147..1060944
Genome browser
AA seq
265 aa
AA seq
DB search
MSKNKQTQLMGHIIAGYPTLELSMYAALGIAHAGANYLEVQFPFSDPNADGVVIEEACDK
SLAQGFKVTQGFSLLQALSSRLAHTQSKDKTTRLIVMTYANLIFRYGVEEFIKEAKECGA
WGMIVPDLPLESDEKLRILAQKYEINIISLIAPKTKASRIKKIAKASDEIVYIVSRSGTT
GSKTHIDSTLLEWLKFIRRFCKKPLALGFGINSNEQVEMLKNNVEIIVAGSYFVRFITEL
SKESKLTPQDYLHKLQEHTKALMGW
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaataagcaaactcagcttatggggcatattatcgctgggtatcctaccttg
gagctaagtatgtatgccgcgcttgggattgcccacgctggggcaaactaccttgaagtg
cagtttccattttctgatccaaatgccgatggcgtagtgattgaagaggcttgtgataaa
agcctagctcaaggttttaaagttacacagggcttttccttgcttcaagcactttcttca
cgcctagcccatacgcagagtaaggataaaacaacgcgtcttattgtgatgacttatgcg
aatttgatttttcgctatggtgttgaagagtttatcaaagaggcaaaggaatgtggggcg
tggggtatgatagtccctgatttgcctttagaatctgatgaaaaactccgcattttagct
caaaaatatgagattaacatcatctcgcttattgcccccaaaaccaaggcttcacggatt
aagaaaatcgctaaagcaagtgatgagattgtctatatcgtctctcgctctgggactacg
ggatcaaaaacgcatatagattctacacttttagagtggcttaagtttatacgcagattc
tgtaaaaagcctttggcactgggctttgggataaatagcaatgaacaggttgaaatgcta
aaaaataatgttgagattatcgtggctggaagctattttgtgcggtttatcaccgaatta
tctaaagaatctaagctcactccgcaggattatctccacaagttgcaagagcatacaaaa
gcccttatgggttggtag
DBGET
integrated database retrieval system
