Helicobacter cinaedi PAGU611: HCN_1082
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Entry
HCN_1082 CDS
T02034
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp00220
Arginine biosynthesis
hcp00240
Pyrimidine metabolism
hcp00250
Alanine, aspartate and glutamate metabolism
hcp01100
Metabolic pathways
hcp01110
Biosynthesis of secondary metabolites
hcp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HCN_1082
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HCN_1082
00220 Arginine biosynthesis
HCN_1082
Enzymes [BR:
hcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HCN_1082
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
RimK
ATPgrasp_Ter
ATP-grasp_5
ATP-grasp_2
ATP-grasp_4
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
BAM12310
LinkDB
All DBs
Position
complement(1103517..1107215)
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AA seq
1232 aa
AA seq
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MPKRTDIHTILLIGSGPIVIGQACEFDYSGTQAVKTLKSLGYRVVLINSNPATIMTDPDF
ADRTYIEPITEEIIADIIKRESVDAILPTMGGQTALNVAMSMYEKGMLEGIEFLGAKPSA
IKKGEDRQAFKEAMLKIGMDLPKSRYAYTEEEALEAAKEIGFPLIIRASFTLAGGGSGVA
YNIDEFKAVAKNGLETSPINEILIEESLLGWKEYEMEVIRDKFDNCIIVCSIENLDPMGV
HTGDSITIAPALTLTDKEYQRMRDASFKILREIGVDTGGSNVQFAINPKNGRMTVIEMNP
RVSRSSALASKATGYPIAKVATMLAVGFSLDEIKNDITGTPASFEPSIDYIVTKIPRFTF
EKFPQADSTLTTSMKSIGEVMAIGGSFKESLQKALCSLETGIFGLNQICNDLETIKKEIR
RPNANRLLYIAEGFGLGMSIEEMHELCRIDKWFLHEIKEIVDSESSITSQILSDEALMRR
IKSYGFSDKMIAHWLKHNDGMEISESEVYQARIGLGVECVYNEVDTCAAEFPSLTPYLYS
TIGNFQVLGGHSVLSDKSAILRSPTAALTSSKLLVGSLENADFSSQSLECQDSSFSLESV
GNTTNTRIADSVSLECQNSQTDSTPCHFERSEKSTHLEFKDSTKQDSSTRDSKAEVSLSD
FSGFQTKGEWSYLKGNDRALSVESVKSTKETTPKKVMIIGGGPNRIGQGIEFDYCCVHSS
FALNDLGIKSIMYNCNPETVSTDYDTSDVLYFEPIDFERVRAVIEREKPDGIIVHFGGQT
PLKLANSLTKINAKIIGTSAKVIDTAEDREKFASFVNNLGLKQPQNGIAYEKEQAYSVAN
KIGFPVLVRPSYVLGGRAMRIVYDDDELKQYMDEVIAVSDSSPVLIDKFLEYAIELDVDC
ISDGESVYIGGIMEHIEEAGIHSGDSASSLPTINIRESMLKEIEQSTAKIALKLGVVGLM
NVQYAIYNNELYLIEVNPRASRTVPFVSKATGLPLAKIATRVMWNHSVKKAESKDSILEE
ALRFYDKYKKVDFTQSPLKPKTLQYVCLKESVFPFTKLSGAELSLGPEMKSTGEVMGIGR
SFGLSFAKSQLACKNALPLSGEVFLSLASLDKKEGVALANDFIELGFSICATEGTYKILC
ENGIEASHILKVSEGRPNIIDRMMNNQIALAINTSDNLSNKDDTHLIRTQIIKSSIPYFT
TLAAARVAIEAIRDIKKYNLSQAFSLQEYLES
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgcaccgatattcacacgattttactcattggttcaggtcctattgtgata
ggtcaggcttgtgagtttgactattcaggcacacaggcagtaaagacgctaaaatctctt
ggctatcgtgttgtgcttataaactcaaatccagcgactattatgacagatccagacttt
gcggatcgcacttatattgagccgattactgaagagattattgcggatattattaaaaga
gagagtgttgatgcgattttgccgactatgggcggacagacagcccttaatgtggcaatg
agtatgtatgaaaagggaatgcttgagggcatagagtttttaggtgcaaagcctagtgcg
attaaaaagggtgaggatagacaggcttttaaagaagctatgctaaagattggtatggac
ttgccaaaatcccgctatgcttatacagaagaggaagccctagaggcagcaaaagagata
ggattccccctcattattcgggctagttttacccttgcaggtgggggcagtggcgtggca
tataatattgatgagtttaaagcggtggcaaaaaatggcttagaaacaagtccgattaat
gaaattttaattgaagagtccctgcttggctggaaagaatatgaaatggaggttatacgc
gataagtttgataactgcatcatcgtgtgtagcattgaaaatcttgatcctatgggcgtg
catacaggagattctatcaccattgcaccggctttaacactcacggataaagagtatcaa
agaatgcgtgatgcaagttttaaaatcttgcgagaaatcggcgtagatacaggcgggagc
aatgtgcagtttgctataaatccaaaaaatggcagaatgactgtgattgagatgaatccg
cgtgtatcgcgtagctccgccctagcgagtaaggcgacaggctatcctatcgcaaaagtg
gctacaatgttagcagtgggctttagcctagatgagataaaaaatgacattacaggcaca
ccggcgagttttgagcctagcattgattatattgttacaaaaattcctagattcacattt
gagaaattcccacaggcagattccacactcacaacgagtatgaagtctattggcgaagta
atggcgattggcggaagctttaaggagagtttgcaaaaggcgttgtgtagccttgagaca
ggcatttttgggttaaatcaaatctgcaatgacttagagactatcaaaaaagagattaga
cgaccaaatgcgaatagactgctttatatcgctgaaggctttgggcttggaatgagtatt
gaagaaatgcacgagctatgcaggattgataagtggtttttgcacgagataaaagagatt
gtagattctgaatctagtattacttcgcagattctaagcgatgaagctcttatgcggcgg
ataaaaagctatggctttagtgataagatgatagcccattggctaaagcataatgatgga
atggagataagtgagagtgaagtgtatcaggctagaattgggcttggtgtggagtgtgtg
tataatgaggtggatacttgtgcggcggagtttccaagtcttacgccctatctttactca
acaataggtaactttcaagttctaggtgggcattcagtattgagcgataaatcggcgatt
ctgcgttcgccaactgcggcacttacctctagtaagcttcttgttggctcacttgaaaac
gctgatttctcatctcaatccttagaatgccaagattctagcttctccttagaatctgtg
ggcaacaccacaaatactagaattgcggattctgtaagtttagaatgccaaaactctcaa
acagattccaccccttgtcattttgagcgtagcgaaaaatccacacacctagagtttaaa
gattccacaaaacaagattctagcactagagattctaaggcggaagtatctttgagtgat
tttagtggttttcaaacgaaaggcgaatggagttacctaaagggtaatgaccgagccttg
agtgtagaatccgttaaaagcaccaaagagacaacgcctaaaaaggttatgataattggc
ggtggtcctaaccgcatcggtcaaggcatcgagtttgactactgctgcgttcattcaagc
tttgccctaaatgatttaggcataaaaagcataatgtataattgcaatccagagaccgtt
agcacagattatgacacaagcgatgtgctttattttgagccaattgattttgaacgcgtc
cgggctgtgattgagagagaaaagccagatggcataatcgtgcattttgggggacaaacg
cccttaaaacttgcaaattctctaacaaaaatcaatgctaaaatcatcggcacaagtgca
aaggtcattgacaccgcagaagatagagagaaatttgcgagttttgtaaataatctaggg
ctaaagcagccccaaaatggcatagcctatgagaaagaacaagcatatagtgtggctaat
aaaatcggctttccggtgcttgtaagaccgagctatgtgcttggcggacgggctatgcgg
atcgtgtatgatgatgatgagctaaagcagtatatggacgaagtgattgctgtgagtgat
agctctccggtgcttattgataagtttttggaatacgccattgagcttgatgtagattgc
attagcgatggggagagtgtgtatatcggcggaataatggagcatattgaagaggcaggg
attcacagcggggatagtgcgagttccctgccgacaataaatattagggaatctatgcta
aaagagatagagcaaagcactgctaaaatcgccttgaaacttggcgtagtggggcttatg
aatgtgcagtatgcaatctataataatgagttgtatttgattgaagtaaatccgcgtgct
agtcgcaccgtaccttttgtaagcaaagctactggactccctttagcaaaaattgccaca
agagttatgtggaatcatagtgtaaaaaaagcagaatctaaagattctatactagaagag
gcattgagattttatgataaatacaaaaaagttgatttcacgcaaagcccccttaagcca
aaaacccttcagtatgtgtgcttaaaagaatctgttttcccttttacaaagcttagtgga
gcggagctctcacttggaccagagatgaaaagcacaggtgaagttatggggataggcagg
agctttgggctaagctttgctaaaagtcagcttgcgtgtaaaaatgccctgcctttaagt
ggagaagtgtttttatcccttgctagtcttgataagaaagagggcgtggcgttagcaaac
gactttatagagcttgggttttctatctgtgccacggaagggacatataagattctatgt
gaaaatggcattgaagcaagtcatattttgaaagtaagtgaggggcgaccaaatatcata
gatcgtatgatgaataatcaaattgcccttgctatcaatacaagcgataatctttcaaac
aaagatgacacacatcttatccgcacacaaattatcaaaagctctattccgtattttacg
actttggctgcggctcgtgtggcgattgaagccattagggatattaaaaaatataatctt
tctcaagccttttctttgcaggaatatttggaaagttaa
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