Helicobacter cinaedi PAGU611: HCN_1108
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Entry
HCN_1108 CDS
T02034
Symbol
oppB
Name
(GenBank) oligopeptide ABC transporter permease protein
KO
K13894
microcin C transport system permease protein
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HCN_1108 (oppB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcp02000
]
HCN_1108 (oppB)
Transporters [BR:
hcp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
HCN_1108 (oppB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
BAM12332
LinkDB
All DBs
Position
complement(1128202..1129254)
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AA seq
350 aa
AA seq
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MLDYIFKRLLLLIPTLLGVMTINFLLMQLSPGGPVEQSIAKMENLSQITEAPTGSNTLYK
GSVGLDSELIEEIKKLYGFDKSLSERYVEMLWRFVCFDFGESFYAQSSVLSIIAQKLPVS
ISLGVFSTLLIYLISIPLGIAKAVRNGSKFDVLSSVVIVVLNAIPAFMFAVVLVVLFCGG
SYFDIFPLRGLVSENFESLSVFEKIVDYLWHLFLPVLCISIGGLATLSMLSKNCFLEEMH
KSYVMSARAKGGSEKHILYKHIFRNAMLLIVSGFPAVFVGAFLSGSLLIEIIFSLDGLGL
LGYESVVNRDYPVVFGTLYIFTFIALVIGIISDILYCFIDPRIHFGSKNV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgctagactatatattcaagcgtttgttgttgcttatccccacacttttgggagttatg
actatcaacttcttacttatgcaactctccccgggcggtccagtggagcaaagtatcgct
aaaatggaaaatctctctcaaattaccgaagccccaacaggctcaaatacactttacaaa
ggctctgtggggctagattctgaacttattgaagagataaaaaagctctatggctttgac
aaatctttaagtgagcgatatgttgaaatgctatggcgttttgtgtgcttcgactttggc
gagagcttttacgcacaatcaagcgtgttatcaatcatcgctcaaaaactccctgtgtct
atctctctaggtgtttttagcacattgctgatttatcttatcagcattccattaggcatt
gcaaaggcggtgcgtaatggctcaaagtttgatgtgctaagtagcgttgtgattgtggtg
ctaaatgctattccggcgtttatgtttgcggtggtgcttgtggtgctattttgtgggggg
agctattttgatattttccctttgcgtgggctagtgagtgagaattttgaatctttaagc
gtttttgaaaagattgtagattatttatggcatttatttttgccggtgctgtgtatttct
atcggtgggcttgcgactttgagtatgctaagtaaaaattgctttttagaagagatgcat
aaaagctatgtgatgagtgctagggcaaagggcggaagtgaaaagcatattttgtataag
catatttttcgcaatgcgatgcttttgattgtgagtggattccctgcggtgtttgtaggg
gcatttttaagcgggagtttgcttatagagattatttttagccttgatgggcttgggctg
ttaggctatgagagtgtggtaaatcgcgattatcccgtggtgtttgggacattgtatatt
tttacctttatagcccttgtgataggcattattagtgatattttgtattgctttattgat
cctaggattcactttggaagtaaaaatgtctaa
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