Helicobacter cinaedi PAGU611: HCN_1610
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Entry
HCN_1610 CDS
T02034
Name
(GenBank) putative hemolysin A
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
hcp
Helicobacter cinaedi PAGU611
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcp03009
]
HCN_1610
Enzymes [BR:
hcp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
HCN_1610
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
HCN_1610
Ribosome biogenesis [BR:
hcp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HCN_1610
23S rRNA modification factors
HCN_1610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_31
NodS
S4_2
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
BAM12796
UniProt:
A0A809NNF0
LinkDB
All DBs
Position
complement(1599420..1600142)
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AA seq
240 aa
AA seq
DB search
MRLDIYVKSLCSSRTKAKEAIESGCVKVNGAVVKKGSFLLEKDDEVGVDSKDLLLSRAGY
KLRGFIESLVQKGLWDRAYLFHKKAIDIGASTGGFTQVLLESGIDSVVCVDVGKNQLHTS
ILQDERVSVFEECDIRDFSDEREFDLMVCDVSFISLYKLMESFERLNVKEYIWLFKPQFE
VGLNAKRNKKGVLKDKSLGQKAANEFCENLKKRHFSVIASEKSVVSGKEGNEEFFVYARR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttgatatatatgtgaaatctttgtgtagctcccgcacaaaggcaaaagaagct
atagaatctggctgtgtgaaagtcaatggtgctgtggtgaaaaaaggctcatttttgctt
gaaaaagatgatgaagtgggtgtggattccaaagatttgctgctttctcgtgcggggtat
aaactgcggggatttatagaatctttagtacaaaaggggctgtgggatagggcatatctc
tttcataaaaaagctattgacattggagcaagcacagggggctttactcaagtgcttttg
gaatctggcatagattctgtggtatgcgtagatgtagggaaaaatcagctccatactagc
attttacaagatgagcgggtgagtgtgtttgaagagtgtgatatacgagattttagcgat
gaaagagagtttgatttaatggtgtgtgatgtgagctttatctcgctgtataagctaatg
gagagttttgaacgattgaatgtaaaagagtatatttggctttttaagccacaatttgaa
gtgggattaaatgcaaaacgcaataaaaaaggggtgctaaaggataaaagtttagggcaa
aaggcagcaaatgagttttgtgagaatctaaaaaagcgacattttagtgttatagcgagt
gaaaaaagtgtagtaagtggaaaggaagggaatgaagagttttttgtctatgccagaaga
tag
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integrated database retrieval system