Helicobacter cinaedi PAGU611: HCN_1823
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Entry
HCN_1823 CDS
T02034
Symbol
frdA
Name
(GenBank) fumarate reductase flavoprotein subunit
KO
K00233
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp00020
Citrate cycle (TCA cycle)
hcp00190
Oxidative phosphorylation
hcp00620
Pyruvate metabolism
hcp00650
Butanoate metabolism
hcp00720
Other carbon fixation pathways
hcp01100
Metabolic pathways
hcp01110
Biosynthesis of secondary metabolites
hcp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HCN_1823 (frdA)
00620 Pyruvate metabolism
HCN_1823 (frdA)
00650 Butanoate metabolism
HCN_1823 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
HCN_1823 (frdA)
00720 Other carbon fixation pathways
HCN_1823 (frdA)
Enzymes [BR:
hcp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HCN_1823 (frdA)
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
HCN_1823 (frdA)
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Gene cluster
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Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
FAD_oxidored
GIDA
DAO
FAD_binding_3
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
BAM12989
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All DBs
Position
1808234..1810210
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AA seq
658 aa
AA seq
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MKVVYSDALIIGGGLAGLRASIAAKEAGLNTIVLSLVPVKRSHSAAAQGGMQASLGNSVK
SDGDNEDLHFADTVKGSDWGCDQDVARMFVTTAPKAIRELAGFGVPWTRIQKGDRPAVIN
GEKVTITEDDFRHGYIHSRDFGGTKKWRTCYTADATGHTMLYAVANEAYKLGVDIQDRKE
AISIIHQDGKCYGAVVRDLVTGELIAYVSKGTLLATGGYGRVYRNTTNAVICEGIGAAIA
METGIAKLGNMEAVQFHPTPLVPSGILLTEGCRGDGGILRDVDGYRFMPDYEPEKKELAS
RDVVSRRMLEHIRNGKGVKSPYGDHLWLDISILGRAHVERNLRDVQDICKTFAGIDPATP
GVWAPVRPMQHYSMGGVRTNYKGETYLKGLFAAGEVACWDLHGLDRLGGNSVSEAVVSGM
IIGGYFTEHCQGANLDVQTTTLEKFVKKEEEYLAALLNSTGNEDVYELKNAMKDIMDNDV
GIFRDGDGLREAVDKLEELYKRSKNIRVQNKKLHSNPELEDAYRTPKMLKIALCVAKGAL
DRTESRGAHTREDYPKRDDANWLKRTLTSWEDPNQTLPTVTYEDLDIMKMEIAPGFRGYG
AKGMIIEHPNSAIRQAEIDKITQEIQAKGGDRYALQEALMPFNLQPQYKARNQRLGDK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagtatatagtgatgcgttaattattgggggcggattagcagggcttagggct
tctattgcggcaaaagaggcaggattaaatactattgtgttaagtcttgttccggttaaa
agaagtcactcggcagcagctcaaggtggtatgcaagcaagtcttggaaactccgtaaag
agtgatggcgataatgaggacttacactttgctgacacagtaaagggaagcgattggggt
tgtgatcaagatgtagcaagaatgtttgttaccaccgctccaaaagcaatcagggagtta
gcaggatttggtgtgccttggactagaatccaaaaaggcgatcgcccagcagttatcaat
ggtgaaaaagtaacaatcacagaagatgacttccgccacggctatatccattcacgcgac
tttggtggcacaaaaaaatggcgaacttgctatactgccgatgcgacagggcatactatg
ctgtatgcggtggcaaatgaagcttataagcttggtgtggatatacaagatagaaaagag
gctatttctatcattcatcaagatggcaagtgctatggtgcggttgtgcgtgatttggta
acaggtgagcttatagcctatgtgtctaaaggcacattacttgccacgggtggctacggc
agggtgtatagaaatacgacaaatgcggtaatttgtgagggtattggtgcagctattgca
atggagacaggtattgcaaaacttggcaatatggaagctgtgcagtttcacccaacgcca
cttgtgcctagtggaatcttgcttacagaaggttgtaggggtgatggtggaatcttgcgt
gatgttgatggctatcgctttatgcccgattatgaaccagagaaaaaggaacttgcaagc
cgtgatgttgtatctcgtagaatgcttgagcatatccgcaatggtaagggtgtaaaatca
ccttatggtgatcacttgtggcttgatatttcaatccttggtcgtgctcatgttgagcga
aacttgcgtgatgtgcaagatatttgtaaaacatttgcgggaattgatcctgccacaccg
ggtgtttgggcacctgtgcgaccaatgcaacattattctatgggtggcgtccgcacaaac
tacaagggcgaaacttaccttaaaggactatttgccgcaggtgaagtagcgtgttgggat
ttacacggattagacaggcttggtggaaactctgtcagtgaagcggtggtatcaggtatg
attatcggtgggtacttcacagagcattgtcaaggggcaaatcttgatgtgcaaactact
acattagaaaaatttgtcaaaaaagaggaagaatatcttgcagcattgcttaatagcacg
ggcaatgaagatgtctatgagcttaaaaatgcaatgaaagacattatggataatgatgtg
ggaatcttccgcgatggtgatggactaagagaagcagttgataagcttgaagagctatat
aaacgcagtaaaaatatccgtgtgcagaataaaaagctccatagcaacccagagcttgaa
gatgcctaccgcacaccaaaaatgcttaaaattgcattatgcgtagcaaaaggtgcactt
gataggacagaatctcgtggagcacatacacgcgaagactacccaaaacgcgatgatgca
aattggctaaaacgcacacttacaagctgggaagatccaaaccaaacattaccaacggta
acttatgaagatttggatattatgaaaatggagattgctccgggattccgcggatatggt
gctaagggtatgattatagaacatccaaatagtgctataagacaagctgagattgataaa
atcacacaagagattcaggctaaaggtggcgatagatatgccctacaagaagctcttatg
cctttcaatctccagccacaatacaaagcaagaaatcaacgactaggagataagtaa
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