Helicobacter cinaedi PAGU611: HCN_1898
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Entry
HCN_1898 CDS
T02034
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hcp
Helicobacter cinaedi PAGU611
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcp03009
]
HCN_1898
Enzymes [BR:
hcp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HCN_1898
Ribosome biogenesis [BR:
hcp03009
]
Prokaryotic type
ribosomal protein modification factors
HCN_1898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
CLP1_P
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BAM13057
LinkDB
All DBs
Position
complement(1885765..1887108)
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AA seq
447 aa
AA seq
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MQFSTNYLHLISLGCTKNLVDSEVMLGKLKSYQLTPEITKADIIIVNTCGFIESAKQESI
QTILEASALRKIGAVLVVSGCLSERYAKELKKEIPEIDIITGVGDYDKIDVMVKELKSLQ
SQRVFLATESNERVIIGSSFHAYIKLSEGCNQSCSFCAIPSFKGKLHSRTLDSTIKELQS
LYERGFRDFSFIAQDSSSYLRDLGQKDGLIELIKAIDNLQLPISCRILYLYPTTTTLELI
ETIANSTCFLPYFDMPIQHIADSMLKLMRRGANRAKHIELLESMRKIPKSFIRTSFVIGH
PGEGEKEFRELHDFVEGFNFDRINLFAYSPQVGTFAYDMPQSVSAKTTNERINKLNRIVK
SQFKAHSKALLGQEVIAICEGKSEISEYFYKARLQPWGKDIDGEILINDSEICDNLGQML
PLDEGYYRILITEQKQDFLFARALERL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgcaattttctacaaattatcttcatctcatttcccttggctgcacgaagaatcttgta
gattctgaagtgatgctagggaagttaaaaagctatcaacttacccctgaaattacaaaa
gctgacattatcattgtcaatacttgtggatttatagaatctgccaagcaggagagtatc
caaactatccttgaagcttctgctttgcgtaagatcggggcagtgcttgtggtgagtggc
tgtttaagtgagcggtatgccaaggaattgaaaaaggagattccagagattgatattatc
acgggtgtgggggattatgacaagattgatgtaatggtaaaggagctaaaatctctccaa
tctcaaagggtgtttttagcgaccgaatctaatgaacgcgtgattataggctcatctttt
cacgcttatattaagctaagtgaaggatgcaatcaaagttgtagcttttgtgcgattccc
tcatttaaaggtaagctccactcccgcacactggattctacaatcaaggaattgcaaagc
ctgtatgaaaggggctttagagattttagctttatcgctcaagattctagctcgtatttg
cgggatttggggcaaaaagatggactaatagagcttataaaagctattgacaatctgcaa
ttacccataagttgtagaatcttatatctctatcccaccaccacaactttggagcttata
gagactattgctaattccacttgctttttgccttattttgatatgcccattcagcatatc
gcggattctatgctgaaacttatgcggcgtggggcaaatagggctaaacacatagaattg
ctagaatctatgcggaagattccaaagagttttatccgcacaagctttgtgataggacat
ccgggggagggtgaaaaggagtttagggaattacacgattttgtggagggctttaacttt
gataggattaatctctttgcttactcgccacaggttggaacatttgcttatgatatgccc
caaagtgtgagtgctaaaactacaaatgaacgcattaacaagcttaaccgcattgtcaaa
tcgcagtttaaagctcacagtaaagccttactaggacaggaagttatcgctatttgcgag
ggcaaaagtgagataagtgagtatttttacaaagctcgtttgcagccgtggggcaaggat
attgatggggagattcttataaatgatagtgagatttgcgataatttagggcaaatgctc
cctttagatgaaggctattatcgtatccttatcacggagcagaagcaggattttcttttc
gctagggcattggagcgtttgtag
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