Helicobacter cinaedi PAGU611: HCN_1965
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Entry
HCN_1965 CDS
T02034
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp00550
Peptidoglycan biosynthesis
hcp01100
Metabolic pathways
hcp01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HCN_1965
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HCN_1965
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hcp01011
]
HCN_1965
Enzymes [BR:
hcp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HCN_1965
Peptidoglycan biosynthesis and degradation proteins [BR:
hcp01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HCN_1965
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BAM13120
UniProt:
A0A809N9T8
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All DBs
Position
1937224..1939011
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AA seq
595 aa
AA seq
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MMSLRYKFLIIFFVVVWLIICMRLFVINVINHEYYEKFAEKNAIRTEVLLPMRGLILDRN
NEPLAINEIGFSISLIPKIRNKQIIESEVDKIVSFLPHLDKDELIDTYNKNNHAYNHAPV
ELVGFVPYAQMLNIYAYLKRSSNIIITANSKRLYPNESAASHVIGYVAKANDNDIQKNPL
SQYSKVIGKDGIEKTYNTYLQGEAGYRKSQINSLYKQVQLLQEDDVLKRNDLRLSLDLKL
QESIDRDFEFHSGAVIVMNVHNGEILAAGSYPEYNINLFVDGISHKNWQELTENIHKPLI
NKLVYGRYPPGSVIKMGMVLAFLEFAGITEHSVIQTPPYIEFGNRKFRDWKASGHGSSDA
IKAIRESVDVYFYTLSQRAGIENMASVLSQMGIGELTGIDIPNEVKGILPSPEWKLRRYG
EQWYGGDTITTSIGQGYFLSTPMQIARYTALIASGKLVTPHFAKDFNNEPARFESKDVLN
EFQKSKLDVLKKGMYQVCSVPGGTAYFRTQGTKVKLACKTGTAQVVGIPQDIQRRVREAD
MEYFHRSHSWITAFLPYENPQYAVTILIEHGGSGGNGGPLLVKIANKLKELGYVK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtttgcgttataaattccttatcatcttttttgttgttgtgtggcttattatc
tgtatgcgtttatttgtgataaatgtcatcaatcacgagtattatgaaaaatttgccgag
aaaaatgccatacgcacagaagtgcttttacctatgcgagggcttatccttgataggaat
aatgaacctttagccattaatgagataggtttttctatctcgcttattcctaagattcgc
aataagcaaattatagaatctgaagtggataaaattgtctcttttctcccacatctagat
aaagatgagcttatagatacatataacaaaaacaaccacgcttataatcacgcccctgtg
gagctagtaggctttgtcccttatgcacaaatgctcaatatctatgcgtatttgaaacgc
tcttcaaatatcattattaccgctaatagcaaacgactttatcccaatgagagtgcggct
tcacatgtgattggctatgtggcaaaggcaaatgataatgatatacagaaaaatcccctt
tcgcaatacagtaaagtcataggcaaagatggcattgaaaaaacctataatacatatttg
caaggtgaagcggggtatagaaaatctcaaatcaactccttgtataaacaagtgcaactt
ttacaagaagatgatgtgctaaaacgcaatgatttgcgtctctcgcttgatttaaaattg
caagaaagcattgatagggactttgagtttcactctggagcagtgattgtaatgaatgtg
cataatggcgagattctagctgctggaagctacccggagtataatattaatctttttgtt
gatggtattagccataaaaattggcaggagcttacagaaaatattcataaacctttgatt
aataagcttgtgtatggacgctatccgcccggctcggttatcaaaatgggtatggtttta
gcatttttagagtttgctgggataactgagcatagtgtcattcaaacaccgccttatatt
gagtttggcaatcgtaaattccgcgattggaaggcttctggacacggtagctctgatgca
ataaaggcaattagagaatctgttgatgtgtatttttacacgctttcacaaagagcaggt
attgaaaatatggcaagtgtgctaagccaaatgggtataggcgaactcaccggcattgac
attccaaatgaagttaaaggcattctgccaagtccggagtggaagctccgccgatatggg
gagcaatggtatggtggcgatacgattaccacttccatcgggcagggctattttctctca
acccctatgcagattgcaagatataccgcacttattgcttcaggcaaacttgtaacgcca
cattttgcaaaagattttaataatgaacctgcaaggtttgaatctaaagatgttttgaat
gagtttcaaaaatcaaagcttgatgtgctaaaaaaaggaatgtatcaagtatgttctgtc
ccgggtggaacggcatattttcgcacacaagggacaaaagtaaaacttgcgtgtaagacg
ggcacggctcaagttgttgggattccacaagatattcaaagacgcgtgagagaagcagat
atggagtattttcatcgctctcattcgtggattaccgcatttttaccctatgagaatcca
caatatgcggtaacaattcttatagaacacggcggaagtggggggaatggcggaccattg
cttgtaaaaatcgccaataaacttaaagagcttggctatgtcaaataa
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