Hippocampus comes (tiger tail seahorse): 109506806
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Entry
109506806 CDS
T04969
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109506806
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
hcq04091
]
109506806
Lectins [BR:
hcq04091
]
C-Type lectins
Lecticans
109506806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Calx-beta
Motif
Other DBs
NCBI-GeneID:
109506806
NCBI-ProteinID:
XP_019711341
LinkDB
All DBs
Position
Unknown
AA seq
2066 aa
AA seq
DB search
MAGVSGLLTLLLLLPVGAAAGGGVEANAGMEVARGRSAFLAKEQLRIRTRAGDLCKVEVV
LNQPVTQRVGRLTPQVFDCDFLPEEVTYRHNGSPLLDSDQVLLRLYRLGPAETGVESVVL
RVRVVDRSPRLADLGPTPLVVPDFYALSNAIDGSVVNIGGRDGAACTVRLLAAAGALTAG
RLVREDDGLRAKGGEAAAAARCPGNRSCADGAEEVSYLKTGCQDFLSSGLKYQHLSPPSP
DLDHIAITVELRDQESGAPLEAESLWLPVRIVGATPNQPPRAAFMASFILEVDQFVLTPI
TTATLDAEDPEGPRDGLLFNVSVPPPRGYVTHLDERTKPVGSFSRSDLHHLKVAYQPPNG
SRSARDNFQMEFRAIDASYATSPPIVVDVSIRAAETDAPRVSWNTGLDLLEGQSRAITWA
ELQIVDSDNIDDVVLVAVDGPAHGRLTVRGAKAFAFGTRDLREGRVAYEHSGSESTRDHV
VFRISDGRHSSRHKFPINILPRDDTPPFLVNNVALEVPEGGALRLRPAALLASDADSADA
RILFRVDVPPRAGRLVSRADPRDPGLPVTSFLQRDLTRGLIFYQHSGEEIFEDSFQVTLA
DAHVPPNLSQAYTVAVAVFPVEDGLPVEWDGSVRRLTLKETQVAFITRAHLRFTHSERPQ
ADLTYAITRPCHSPQRPGLMDAGRLFFVDGAAALSRDPTAPALKSFTQHAVDHLKVAYMP
PLEDIGPDPLAVRFVFSVSAHRGGAVANLDFNITVTPVDDQPPEAFGNLLRVEEGGAAFV
TDEHVLVRDRDTHEPDLKVELERPARRGRLELRGRSLRPGDAFALADLRGLAVRYVHDDS
ESTEDDVGLRVTDGVNAVLLDLRIHVVPVNDEPPQLGAGLRGGLRCPEGGRVQLTADYLL
ATDRDSEDAKLSYMLARRPARGELRRAGLAVDKFSQEDLLRGDVFYVHTGGEIGPAPASD
TVTLIISDGEAGGTDGCCPGDAPPVPLHGTLPVYDLNVTLLPVNNKVPSVILGGSVLAVD
EGSWACLCGGILGAWDADSPPAELTFHLDAKPLHGFLENVQPTPGYEKSNAGVPIESFKL
DEVTSGFINYVQSEHEGAEPTADQLLISVSDGLHHSASAPVRIVIHPTNDEKPSLRLANF
TVKEGGARELTPSLLDAFDLDAPADELTFSLAGAPAHGGLKAGPSRPPDRTGASPAAVAS
FTLRQLRQGLRVWYEHDDSETLEDRLTLRLSDGVHSLSATAVVSVLPVDDHPPRLLKNAG
AQAEPGERRLLSAVVLQAEDADTPPEKLFYLLHAAPRFGRLQLESRTGPTELAAGRNFTQ
DDVDANRLSYEPRRRGDDGGFQGHDSFRFSLSDLEHQSSAHTFSITISGAHKGDVSVWTG
AVHVASGQRVLLNTDFLRAQDGGGRPDRLVYTVTAAPRHGLLHAAARPGVPLATFTQMDV
AAQRVCYTHDNGQLHRSDAFSFVVSNGERSQAGTVRLSIEAVDRIPPTLEVNAGVRVRDG
GTAAIGAEVLRLSDRADPAPVVFTQADVDGRHLAYRHADPAGRRLNDSFRFLPGDGRNRG
YLRDGRLRTEPAVFAIHVEHADRSPPILTTLGRPSEVIRLRDGRRALSITSEHLRAVDAH
SPPDGLQFAVVTPPRFGHLENIRTGAYVRGRFTQRDLQRRSLVFVVPADADVTEDSFVFR
LSDPAGNAAPPQTLDLSWSRIELSASCFRTCETAGTLQVHIQRRGKSADPAYVAIQVRDG
TAKAGRDFTHSTAGLIQFDPGVDRKTWSIYPEADGLEENDEDFTVVLQDPKNAVLGQRTS
ARVEIVDPRGGRCDLSKGETAEAPPPSAVATPPPAVAAPPTAEDDAVLDAEAEQFFGEST
HPPRGDVPNRRPFAGEDDEDDGPAEPRDRAHPGHTDEQVAGKIGLQVLSAGAKPDHKVWT
FHSLTSLRLEEVAAPQAGGATERHGPGHAPPAGSRKREAESRQRKTGRSPTGRCEVGWTR
HGGRCYLAGSSVSSWASAERSCSVLLSNSSLPSVRSRRHLGWLWRFGGEKPFWIGRSEMA
ATRRGLTSAVGVLAGGELIPMDVRRL
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtgagcgggctcctcacgctgctgctgctgctgccggtcggagcggcggcc
ggcggcggcgtggaggcgaacgccggcatggaggtggccagggggcgctcggccttcctt
gccaaggagcagctgcggatccggacgcgggccggcgacctctgcaaggtggaggtggtc
ctcaaccagcccgtcacgcagcgagtgggccggctcacgccgcaggtgtttgactgcgat
ttcctgccagaggaagtgacctaccggcacaacggaagccctctgctggacagcgaccaa
gtgctactgcggctctacaggttggggccggcggagacgggcgtggagtcggtggtcctg
cgggtccgcgtggtggaccgctcgccccgcctggcggacttggggccgactcccctggtg
gtcccggacttctacgcgctgtccaacgccatcgacggctcggtcgtcaacatcggaggc
cgggacggcgcggcgtgcaccgtgcgattgctggccgccgcgggagccctgaccgccggt
cggctggtgcgggaagacgacggcctccgcgcgaaaggtggcgaggcggcggcggcggcg
cgttgccccggcaaccgatcctgcgccgacggcgccgaggaagtgtcttacctgaagacc
ggctgtcaggacttcctgagttccggcctcaagtaccaacacctcagcccaccctcgccc
gacctggaccacatcgccatcaccgtggagctgagggaccaggagagcggggctccgctg
gaggcggagtctctgtggctgccggtccggatcgtcggggcgacgcccaaccaaccgccg
cgggccgccttcatggcgtccttcatactggaggtggaccagttcgtcctgacccccatc
accaccgccacgctggacgccgaagaccccgagggcccccgggacggcttgctgttcaac
gtgagcgtcccgccccctcggggctacgtcacccacctggacgagcgcaccaagcccgtg
ggctccttcagccggtccgacctgcaccacctgaaggtggcgtaccagccgcccaacggc
agccgctccgcgcgggacaactttcagatggagtttcgggccattgacgcttcctacgcg
accagtccgcccatcgtggtggacgtgtccatcagggcggcggagaccgacgcgccccgg
gtgtcctggaacaccggtctggacctgctggaggggcagtcgcgagccatcacgtgggcg
gagctgcaaatcgtggacagcgacaacatcgacgacgtcgtcctggtggccgtggacggg
cccgcgcacgggcgcctcacggtcagaggcgccaaggcgtttgcctttggcacgcgcgac
ctgcgcgagggccgcgtggcgtacgagcactcgggcagcgagagcacgcgcgaccacgtg
gtgttccgcatcagcgacgggcgccacagctcgcgccacaagttccccatcaacatcctg
ccgcgcgacgacacgccgcccttcctggtcaacaacgtggcgctggaggtgcccgagggc
ggcgcgctcaggctccgccccgccgccctcttggcctccgacgcggactccgccgacgcc
cgcatcctcttcagggtggacgtccccccgagggccggccgcctcgtctccagggccgac
ccccgcgaccccggccttccggtcacgtccttcctccagcgcgacttgactcgaggtctg
atcttctaccaacactcgggagaggaaatcttcgaggactccttccaggtcacgctggcc
gacgcccacgtccctcccaacctgtcgcaggcttacacggtggcggtggcggtgttcccg
gtggaggacgggcttccggtggaatgggacgggagcgtgcgccggctcacgctgaaggag
acccaagtggccttcatcacccgcgcgcacctgcgcttcacccacagcgaacgcccgcag
gccgacctcacctacgccatcacccggccctgccacagcccccaacgtcccggtttgatg
gacgccggtcgtcttttcttcgtggacggcgccgccgccctgagccgggacccgacggcg
ccggcgctcaagtccttcacgcagcacgcggtggaccacttgaaggtggcgtacatgccg
cctctggaggacatcggacccgacccgctcgccgtccgcttcgtcttctccgtcagcgcc
catcgcggcggcgccgtggccaacctggacttcaacatcaccgtcacgcccgtcgacgac
caaccgcccgaggctttcggcaatctcttgcgcgtggaggaaggcggcgcggcgttcgtg
acggacgagcacgtgctggtgcgcgaccgcgacacccatgagccggacctcaaagtggaa
ctggagcgcccggcgcgccgcggacgtctggagctgcgagggcggagcctgcgacccgga
gatgctttcgcgctcgccgatctcaggggactcgctgtcaggtacgtccacgacgactcg
gagagcaccgaggacgacgtgggcctgcgtgtgacggacggcgtcaacgccgtcctgctg
gacctgcggattcacgtggtgccggtgaatgacgagcccccgcagctgggcgcgggcctg
cgcggcgggctgcgttgcccggagggcgggcgcgtccagctgacggccgactacctgctg
gccaccgaccgcgacagcgaggacgccaagctgagctacatgttggcgcggcggcccgcc
aggggcgagctgcgcagggcgggacttgccgtggacaagttctcgcaggaggacctcctg
cgaggtgacgtgttctacgtgcacacgggcggcgagatcggccccgctcccgcctccgac
accgtcacgctcatcatctccgacggcgaagcgggcgggacggacggctgttgccccggt
gacgccccgcccgtcccgctgcacggcacgcttcctgtgtatgacctcaatgtcacgcta
cttcctgtcaacaacaaagttcccagcgtcatcctgggagggtccgtgttggcagtggac
gagggttcatgggcgtgtctgtgcgggggcatcctgggggcctgggacgccgacagcccc
cccgccgagctgacctttcacctggatgccaaacctctgcacggcttcctggaaaacgtt
caaccgacgccgggatacgagaagagcaacgcgggcgtgcccatagagtcattcaagttg
gacgaggtgacgtcgggcttcatcaactacgtccaatcggagcacgaaggggcggagccc
acggcggaccaattgctgatcagcgtgagcgacggcctgcaccactcggcctcggcgccc
gtccgcatcgtcatccatcccaccaatgacgagaagccgtcgctgcgcctggccaacttt
accgtgaaggaggggggcgcgcgggagttgaccccgtccctcctggacgccttcgacctg
gacgcccccgcggacgagctgaccttcagcctggcgggggcgccggcgcacggcggcctg
aaggccggcccctcccgtcccccggaccggacgggcgcttcgccggcggccgtggcgtcc
ttcaccctgcggcagctgcgccagggcttgcgcgtgtggtacgagcacgacgactcggag
acgctggaggaccggctgaccctgcgactgagcgatggcgtccactcgctcagcgccacc
gccgtcgtcagcgtgctgcccgtcgacgaccacccgccccgcctgctcaagaacgccggc
gcgcaggcggagcccggcgagcgtcggctgctctccgccgtggtcctccaggccgaggat
gccgacacgccccccgagaaactcttctacctgctccacgccgcgcctcgcttcggaaga
ctgcagttggagagccggacgggcccgacggagctggcggcgggtcgcaacttcactcag
gacgacgtggacgccaaccggctaagctacgagcctcgccggcgcggtgacgacggcggg
ttccaaggtcacgacagcttccgcttcagcctcagcgacctggaacaccaaagctccgcc
cacacctttagcatcaccatcagcggcgcccacaaaggcgacgtctccgtgtggacgggc
gccgttcacgtggcgtcgggccagcgcgtgctcctgaacacggacttcctgcgggcgcaa
gacggcggcgggcgcccggaccggctggtctacacggtgacggcggcgccgcgccacggc
cttctgcacgcggcggcgcggcccggcgtgccgctggccaccttcacgcagatggacgtg
gccgcccagcgcgtctgctacacgcacgacaacgggcagctgcatcgcagcgacgccttc
agtttcgtggtgagcaacggcgagcggtcgcaagccggcaccgtgcgtttgtccatcgag
gcggtggaccgcatcccgccgacgctggaggtcaacgcgggcgtgcgagtgcgcgacggc
ggcacggcggccatcggcgccgaggtcctgcggctcagcgaccgcgccgaccccgcgccc
gtcgtcttcacccaggccgacgtggacgggcgccaccttgcttaccggcacgccgacccc
gccggccggcgcctcaacgacagcttccgcttcctgcccggggacggccgcaaccggggc
tacttgagagacgggcggctgaggaccgagccggccgtcttcgccatacacgtggagcac
gcggaccgctcgcctcccatcctgaccacgttggggcggcccagcgaggtgatccggctg
agagacggtcggcgggccctctcgatcacgtccgagcacctgcgggccgtcgacgctcac
agtccgcccgatgggctccagtttgccgtcgtcacgccgccgcgcttcggccacctggag
aacatccgtaccggagcctacgtccggggccgtttcacgcagcgagacctgcagcgccgc
tcactggtcttcgtggtgcccgccgacgccgacgtgacggaagacagcttcgtgttccga
ctcagcgacccggcgggcaacgccgccccgccacaaacgttggatctgtcctggtcccga
atcgagctgtcggccagctgcttccggacctgcgagacggcgggaacgctccaggtccac
atccaacggcgcgggaagagcgccgacccggcgtacgtggccatccaggtccgggacggc
accgccaaagcgggtcgggacttcacgcacagcacagccggactgatacagtttgaccca
ggagtcgaccggaaaacgtggagcatctacccggaagccgacggcctggaggagaatgac
gaagacttcaccgtcgtgctgcaggaccctaagaacgccgtcttgggtcaaaggacctct
gccagggtggagatcgtcgaccccagaggaggacgttgcgatttgagcaagggggaaacg
gccgaggcccctcccccgtcggccgttgccacacctcctccggcagtcgccgcgccccct
acggcggaggacgacgccgtccttgatgcggaggcggagcagtttttcggggagagtacg
caccctccccgaggcgacgtcccgaaccgccgacccttcgcgggcgaggacgacgaggac
gacggcccggcagaaccgcgagaccgagcgcatcccggacacacagacgagcaagtcgcc
gggaagattggactccaggtgctgtcggcgggagcaaagcccgaccacaaagtctggacg
ttccacagtctgacttctctgcggttggaggaggtcgcggccccgcaggcaggcggcgcc
accgagaggcacggcccaggacacgcccctcccgcgggaagcaggaagcgggaggctgag
tcacgccagcgcaaaacggggaggtcgccgactggccgctgtgaagttggctggactcgc
cacggggggcgctgttacctggccggctcctccgtcagcagctgggcgagcgccgagcgc
tcctgctccgtcttgctgtccaatagcagcctgccgagcgtgcggtccagacgccatctg
ggctggctctggagattcggtggcgagaaaccattttggatcggccggtccgagatggcg
gcaacccgccgaggccttacaagcgccgtcggcgtgcttgctggtggagagctcatcccg
atggacgtccggcggctgtga
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