KEGG   Hippocampus comes (tiger tail seahorse): 109506844
Entry
109506844         CDS       T04969                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18 isoform X1
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hcq03009]
    109506844 (wdr18)
Ribosome biogenesis [BR:hcq03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    109506844 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40_alt EIF3I Beta-prop_TEP1_C WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_VPS8 KNTC1_N WDR54 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_IP5PC_F Ge1_WD40 bZIP_1
Other DBs
NCBI-GeneID: 109506844
NCBI-ProteinID: XP_019711407
UniProt: A0A3Q3DNK5
LinkDB
Position
Unknown
AA seq 429 aa
MSAPLEVVMSSDASSQLWNVSVFDVHSGSSLLSYRGGNSSARTLCLVNGQYLLSAQLAKN
FINVWEIHRKEQLQQKIVCPGAVTCISASADGVFLAAGVGEAIYLWEVSTGKLLYVVTRH
YQDVTCVKFTDDGSHFVSGGKDSVVLVWSLSSVIQVDLSYAPEPRHILSHHSLPITDLHC
GMMGAQARVATASLDQTVKLWEVSSGELLLSVLFDVEIMSVTLDPCERFLFCGGSDGNIF
QVSLGTQQGAAADKSFQCDGEGKRTFKGHRKMVTCLSVSMDGTLLVSGSHDESVRLWDVQ
SKQCVRCFAHKGPVTNASIVVAPANMFLPDSRPSVPLPRFSRHQLESDGGQSGEACVRLG
LHAQEEEPAYLQKADRLDALMNGATDKWLAGDGENGKARVAELEEEVQTLKKVNKDLYDF
SSQLLTKAT
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgtcggccccgttggaggtggtgatgagcagcgacgcgagctctcagctttggaacgtg
tccgtgttcgacgtgcatagcggctccagcctgctgtcctaccgcggcggcaacagttcg
gcccggacgctgtgcctcgtcaacggccagtacctgctgtccgcgcagctggccaagaac
ttcatcaacgtttgggagatccacaggaaggagcagcttcagcagaagatcgtttgtccg
ggtgccgtcacgtgcatcagcgcctcagcggacggcgttttcttggcggccggcgtgggc
gaagcgatttatttgtgggaggtgtccacaggcaagctgttgtatgtggtcacgcgtcac
taccaggacgttacctgtgtcaagttcaccgatgacggcagccattttgtttctggaggg
aaagacagtgtggttctggtgtggagtctcagcagtgtgatccaggtggacttaagctat
gcccctgagcctcgtcacatcctgtctcatcactctctgccaatcacagacctccactgt
ggcatgatgggagctcaggcccgagtcgccactgcgtccttggaccaaacggtcaagctg
tgggaggtgtcttcaggcgaactcctgctctcggtgctctttgatgtagaaatcatgtcc
gtgacccttgacccatgcgaacgcttcctgttctgcggcggcagcgacgggaacatcttc
caggtttctctgggcacccagcagggcgcggcggcggataaatcgttccagtgcgacggc
gaggggaagcgaacgttcaaaggacacaggaaaatggtcacctgcctgtccgtgtccatg
gatgggacgctcctggtgtcgggatcgcacgatgagtcggtgcgactgtgggatgtccaa
agcaaacaatgcgtccgttgcttcgctcacaaaggcccggtgacgaacgcgagcatcgtg
gtggctcccgccaacatgttcctacccgactcgcgaccctccgtccccctgccgcgattc
agccgccaccagctggaaagcgacggcggccaatcgggcgaagcgtgcgtccgccttgga
ctccacgctcaggaggaggagccggcctacctgcagaaagccgacagactcgacgctttg
atgaacggcgcgaccgacaagtggctcgcgggagacggcgagaacggcaaagcgcgcgtg
gccgagctggaggaggaggttcaaacgctgaagaaagtcaacaaagatttgtacgacttc
tccagtcagctgctgaccaaagccacgtga

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