Hippocampus comes (tiger tail seahorse): 109507478
Help
Entry
109507478 CDS
T04969
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcq03036
]
109507478 (tdrd12)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
109507478 (tdrd12)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109507478 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
109507478
NCBI-ProteinID:
XP_019712488
LinkDB
All DBs
Position
Unknown
AA seq
1351 aa
AA seq
DB search
MSKLINLKFVDPSCIWAQLDSLAGMEAVGKHQYNELFVHMNNFYEDVTSDECVVTPSSLE
EGQVCVVYWSQMKIWCRARLQSIVSDSHMSLAYCDLLDHGESLVVLLSQIRHVKQDFLQL
PFWMRRFHLARVKPLTLQVSFCEKAKLAPSSHWDSSATSYMHDLLKTSSQMEAVLMKDES
NSTAIELYVTVKSVKICVNDELVSKQFAIHSQDCSDSSKLEQLNVHHFRFTHHSLNTPAR
KPAARATATPVPFTLETAPPPVMRQARLGGCDGMTAPSQSPMSEGTSRSKPTDGQTLPGS
QSASDSSKESVSSLAATFKSHLTLFRFMRFLNPASSFQEAETNVSQPEDLIKYSPQHSSS
SSSTGQEVLSPAQSDVKKRTDDNSACTRLSEWLNPQPLKVQSDDDVDEDNPMLPSAPKTG
EILVHSAVPMELCSSLDDAPITETLCRTMAREQCCLSPTDLLSWPSVGRGNNTVVISHTA
DQPQSYLAPFLSHILLSTIFTISSSRVGPVAVVLCPGWEKVQLVCDLLEDIKVTRRLNPT
CVLIGGAKDEAKGVKIPKDCLLLVTTPFSLVRLLSCHCFLFLRLSHIVLDEADQLFTLAP
EQMKSILLHFQKVISRQEMSSCPQQLVAVAKRWTSHMEALVAEHMPYACVIIAAPKEAAL
YGNVQQLVFMTLESGKISTLLSALDFSPDAGQKTIIICNSAEEVEDVHKAVSCKSALCLK
IHEYLMHTLDSVLQQWAESVGPGTQVILVTATECLTCWGLTDATCVVHFGFPSSPKIFGS
RLFCMSSNFRKLTDSPSSQDPLSKIHQVCRSLLLVSEKNAQHAGGLVRYLRRSHTLLPAE
LLSFAEAADVAREEQKTKRPLCHHLKSFGVCRFSAMCPDRHRLIFQLDQSKLPASGLIEV
LPLHIKTASVFYGRIIQKEDNVFDSMVADMTSYYADSKPCPEEVLQGGLYAVQDNDNFHR
VKVLTVPDTQGRLFFSVLVRFIDVGKEEEVKSHQILRLPEQFHSLPAQAVEMILCQVKPG
DAEPDWHPKVTRLISQKIQGVKHRARAVLSLGNTVFLDFMVLESRVAGMKTVINEHNAPT
LILNTGMAERNPDHLDQLKLLTQEGTTNHVCGGNQNSDPPVKPEYLQMSNSLHMRNTSDE
GVKEFDASELKPLPLLHEVDKKTNVQTSSDISRNETGPDITTNQMAHLNDKDDVTAGEDQ
NNNELCHGDGHMTKSLHPQVRWYQTSTSLSITLKLRDPQNQRCDFHTDRAVYSGIVNGCR
YGVDLDLHAAVWAEHCRWELKYNEPVLTLVKKEPGYWPTLLRSKNIFVNYNYEHLEEDDT
VSTPSEVFVGDTGEEHHFVNGYSSTDSDSTC
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagttgattaatttgaagtttgtggacccttcatgcatctgggcccagctggac
agcctcgctggcatggaggcggtgggcaagcatcagtacaacgagctgtttgtacacatg
aacaatttctatgaggatgtcaccagtgacgagtgtgtggtgacaccctcctcactggag
gagggacaggtgtgtgtggtgtactggtcccagatgaagatatggtgccgggccaggctg
cagtccattgtctctgactcgcatatgtctcttgcttactgtgacctgctggaccatgga
gaatctctggttgtcctcctcagccaaatccgacatgtcaagcaggacttcctccagctg
ccattctggatgcggaggttccatctggcgagggtcaagcccctgacgctccaagtgtct
ttttgcgagaaagccaagctggcgccatccagccactgggacagctcagccacatcctac
atgcatgaccttctcaagacttcaagtcagatggaggctgttctaatgaaggacgagtcc
aactccaccgccatcgagctctacgtgaccgttaagagcgtcaagatatgtgtgaatgat
gaactggtttccaagcagtttgccattcacagccaagactgttctgacagcagcaagctg
gaacagctcaatgttcaccattttagatttacacaccacagcctcaacacacctgccagg
aagcccgcagcacgagccacagccactccagtgccatttacactagaaactgctcctcct
ccagtgatgaggcaagctagacttggaggctgtgatgggatgacagcaccctctcagagc
ccaatgagtgagggaactagcaggtcaaagcccacagatggacaaacgttaccaggcagc
caatcagcaagtgactcgtcgaaggaatctgtctcctccttggccgccacgttcaagtct
cacctcactctgttcaggttcatgaggttcctcaatccggcaagcagctttcaggaggca
gagacaaatgtgagtcaacccgaggatctgattaagtattcacctcaacattcttcaagc
tcatccagcacaggacaggaagttctgtctcccgcccagtcggatgtgaagaagaggacc
gatgataactcggcgtgcacaagactttcggagtggttgaatccacagcctttgaaagtc
cagtcagatgacgatgttgatgaagataatccgatgcttcccagtgctcccaagacgggt
gagattctggtgcactccgctgtcccgatggagctgtgctcaagcctggatgatgccccc
atcactgagaccctttgcaggacaatggcgcgggagcagtgctgcctgtctcccacggat
cttcttagttggccctctgtgggccgaggaaacaacaccgtggtcatctcacacacagcc
gaccagccccaaagctacctggcacccttcctcagtcacatactgctcagcactatcttc
accatctcctcttccagagttggcccagtagcagtggtgctgtgtcccggctgggagaag
gtccagctggtgtgtgaccttctagaggatatcaaggttacccggcgcctcaatccaacc
tgcgtgctgatcggtggtgccaaagatgaggccaaaggcgtcaagattcctaaagattgc
ctgctgctagtgaccacccccttcagcttggtccgtctgctgtcatgtcactgctttctg
ttcctgcgtttgagccacattgtgttggatgaggctgaccagctcttcacgcttgctcca
gaacagatgaagagcattttgctgcattttcagaaggtcatctcccgccaggaaatgtcc
tcatgtccacagcagctagtcgctgtggccaagcggtggacgagtcacatggaggctttg
gtggctgagcacatgccctacgcttgtgtcattatagctgctcccaaagaagcggcgctg
tatggaaacgtgcagcagctggtcttcatgaccttggagagcggcaagatctccacattg
ttgagtgcgttggatttcagccctgacgcaggccagaagactatcatcatctgcaactct
gctgaggaggttgaagatgtccacaaagctgtgagctgtaaatctgcattgtgtctgaag
attcacgagtatttaatgcacacgttggactccgtactccagcagtgggccgaaagcgtt
ggccctggaacacaagtcattctggtcactgccacagagtgcctgacgtgttgggggctg
acagatgccacctgtgtggtccactttggcttcccaagttcacccaaaatctttggaagc
cgactcttttgtatgagcagcaacttcagaaaactcacagattctccttcgtcccaagac
cctttgtcgaaaatccatcaagtctgcagatccttgctgctggtctcggagaagaatgca
cagcacgctggtgggctggtgcgctacctcagacgaagccacaccctgctccctgcggag
ctgctctctttcgcagaggcggccgatgtggcccgagaggagcagaagactaagcggcca
ctctgtcaccacctgaagagctttggagtgtgcaggttcagtgccatgtgtccagatcgc
cacaggctcatatttcaactggatcagtccaaacttcctgcttctggactcatagaggtg
ttgcctctccacatcaagactgcgtctgtcttctatggtcgtataatccagaaggaggac
aatgtctttgacagcatggtggctgacatgacgtcttactatgctgacagcaagccttgt
cctgaggaggtgctacaaggaggcttatacgctgtgcaggataacgacaatttccacagg
gtgaaggtcctgactgtccccgacacccaaggccgcctatttttcagtgtcctcgttcgt
ttcattgatgtcggaaaagaggaagaagtcaaatcccaccagatcctgcgactgcctgag
caattccactctttgcctgcccaggctgtggagatgatcctgtgccaggtgaagcctggt
gacgcagagcctgactggcatcccaaggtgaccagactcatcagccagaagatacagggt
gttaagcaccgagccagagccgtcctcagtctgggaaacacagtctttctggattttatg
gttctggagagtcgggtggccggtatgaagaccgtgatcaatgagcacaacgctcccact
ctcattttgaatacgggcatggcagaacgaaacccagatcatctggaccagttgaagctt
ctcactcaggaaggaacaaccaaccatgtatgtggtgggaatcaaaacagtgaccctcca
gtcaagcccgagtacttgcagatgagcaacagtttacacatgaggaatacatctgatgaa
ggagtcaaggagtttgatgcatcggaactcaagccacttcctcttctccatgaagtagac
aagaagacaaacgtccaaacttcttcagatatcagcagaaatgaaacgggtcctgacata
acaaccaaccagatggctcatcttaacgacaaagatgatgttactgctggtgaagatcaa
aacaacaatgagctgtgccatggagacggtcacatgaccaagagtctgcaccctcaggtc
cgctggtatcagacatccacgtcactgagcatcacactgaagctgagggacccacaaaat
cagcgctgcgacttccacaccgaccgcgcggtgtacagtggcattgtgaatggttgccgc
tacggagtggatctggatcttcacgcggccgtgtgggctgagcactgccgctgggagcta
aagtacaacgagcccgtcctcacgctggtcaaaaaagagcctggctactggcctacgctt
cttaggagcaagaacatttttgtgaattacaactacgaacatctggaggaggacgacact
gtgtcaactcctagtgaagtgtttgtgggtgacacgggagaagagcaccactttgtcaat
gggtacagcagcaccgacagcgactccacatgctga
DBGET
integrated database retrieval system
