Hippocampus comes (tiger tail seahorse): 109507496
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Entry
109507496 CDS
T04969
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109507496 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109507496 (myo5c)
04131 Membrane trafficking [BR:
hcq04131
]
109507496 (myo5c)
03029 Mitochondrial biogenesis [BR:
hcq03029
]
109507496 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hcq04812
]
109507496 (myo5c)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
109507496 (myo5c)
mRNA cycle factors
P-body specific factors
109507496 (myo5c)
Membrane trafficking [BR:
hcq04131
]
Others
Actin-binding proteins
Myosins
109507496 (myo5c)
Mitochondrial biogenesis [BR:
hcq03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
109507496 (myo5c)
Cytoskeleton proteins [BR:
hcq04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
109507496 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
HTH_17
Myosin_N
AAA_16
Crescentin
Motif
Other DBs
NCBI-GeneID:
109507496
NCBI-ProteinID:
XP_019712517
LinkDB
All DBs
Position
Unknown
AA seq
1741 aa
AA seq
DB search
MALIQLYTRYNRVWIPDDEHVWKSAEIVRDFHYGDDCLQLLLENGTEHKYIVDSSPPELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESRIIYTYCGIILVALNPYKQLHIYG
DAIIHAYSGQNMGNMDPHIFAVAEEAYKQLARNHKNQSIIISGESGAGKTVSARYAMRYF
AVVSKSGSKTQVEDKVLASNPITEAIGNAKTIRNDNSSRFGKFTEISFDNRYRIIGANMR
TYLLEKSRVVFQAESERNYHIFYQLCACAHLPQFKALKLMSADEFHYTGMGGDIIIEGVD
DRKGMEETQQTFSLLGLKEDFQSDVFKVLAAILHLGNVEIKSSGDDRSSISNSDSHLHIV
CELLAVRADDLVRWLCNRRLVLVAETVVKPLPKDRAVNSRDALAKRTYAHLFNCVINRIN
KALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLSNYLNSNPLFELP
KLSNETFIIQHFADKVEYQCKGFLEKNRDALYEELVEVLKASKFAFLAKFFQEEGQSVPN
IKGIKVKPAKPGVKSANKQLRASVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSGRVVQQLRACGVLETIRISAQSYPSRWTYFEFYSRYNVLMTNEEASLDDKTQTCKYV
LQRLIQDPNQYKFGRTKIFLRAGQVAYLEKLRLDRLRAACITIQKYVRGWNQRRKYQRLR
QAAILVQQYVRGKRTVRKAVSAANLKRGWSAVVIQRYWRGFRIQKSYQTVRLAIITIQAF
TRGWRARKSYSQLVEARKALVLQKYARAWLARRRFKAMRQLVHQVQLSFRVQQLRKKNEE
QSKENRGLVERLTSLANSHSQAMDRLHALEAQLEKSAVQKASLEAREKKAKEDASLKLTD
LQSEVDGLIIKKQTMEKTFEASAQQQQEKFDQIKMTLLEEKENQARLRKIAENKLDIQRE
EHEKELAILKEELRRLKDERVSLKMKLEDGEQMSADLQDQVAQLTKHVKVIPELRRDLSN
LQNQKQTIDRKMKQQSEEARAKLHDISKVLSGSVVKEEVLLGITADYSEKTYEAEDLLAA
FNGLEKATRTLENHRKEQKEIYETQIEGLRLKVDYLQNENSSLQTFFTEKNNMNENIRQE
VIRLSSENAVIPELKVQISELQRQKHECEVLVEEQRKELEEKADEIKNTLQKKVEEESSK
CRNFEDQTQVLEEAKTTLQGQIKDLQEENDHLSRQLQMERDAKIRLRLEAAELSSRNLDF
EEQLDQKERVIKQLENQMISLETAQKAQKTSSPVPKHYLGMLEYNLEDESRLIQNLILDL
KPKGVAVNMIPVLPAYILFMCIRHADYMNNEDKLRSFMNATISAVKKVTMTHQNDLALLS
FWLSNMYQLLNCLKQYSGEVEFSKHSTARQVNNCLQNFDLSDHQQVVSDLAICIYHQFIA
AMERALTPAIVPGMLEHESLQGISSMKLRGFLKRSRKNNDDMETYTISFIIQRLSHFHSN
MTQHGTEPHLIKQVVKQLLFHIGATTLNNLLLRKDMCSCRKGMQIRCNISYLEEWLQEKD
FQSCHFIDTLKPLIEAAWLLQVSKSTDDDAKAITEKCTELNTVQIVKILNSYTPVDLFEK
RVASSFVRKVQSLRQDHDSAAQLMMDAHYRFPVTFPFCVSSQALELLQVPSSLHLEFLTM
I
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgattcagctatacacgcggtacaacagagtgtggattccagatgatgaacat
gtgtggaaatcagcagagatcgtgagagatttccattatggagatgattgtttacaactg
ctactggaaaatggcacagagcacaagtacatcgttgactcgtcgccaccagaactccct
cctcttcgcaacccagacatcttagttggggagaatgatctcactgcgctcagctacctc
catgaacctgctgtcctgcacaaccttaaagtgcgctttctggaatccagaatcatctac
acctactgtggcatcatcctggtggcgttgaatccctacaagcagcttcatatctacgga
gatgcaatcattcacgcatactctggtcagaacatgggcaacatggatcctcatatattt
gcagtggcagaggaggcttacaaacagctggccagaaaccataagaaccaatccatcatc
atcagtggagagtctggagctggtaaaacagtgtccgctcggtatgctatgaggtatttt
gctgttgtcagcaaatctggcagcaagacccaagttgaagacaaggttctggcgtccaat
cccataacagaggccattgggaatgcaaagacgatcaggaacgacaacagcagccgtttt
gggaaattcactgagatcagttttgacaataggtatcgaataattggtgcaaacatgagg
acttacctgttggagaaatccagagttgttttccaggctgagtctgagcggaactatcac
atattttaccaactgtgcgcctgtgcgcatctgccacagttcaaggcactgaaactgatg
agtgcagatgagttccactacacaggcatgggtggcgatatcataattgaaggtgtggat
gacaggaaaggcatggaggagactcagcagaccttttcacttttggggctgaaggaggac
tttcagtctgatgttttcaaagttcttgcagccattctccatctgggaaatgtggaaatc
aagagctccggggatgatcggtcgtccatttctaacagcgattcacatctgcacatcgtc
tgcgagttgttggctgtgcgtgcagacgacttagtgcgttggctgtgcaatcggaggctt
gtcctggtggccgagacggtggtgaaaccgttgcccaaagaccgtgcagtgaattccaga
gatgctctcgccaaacggacctatgctcatttgtttaactgcgttattaacaggatcaac
aaagcactgcaggtcccagggaagcaacatgctttcataggggtgctggacatttatggc
tttgagacgtttgacatcaacagctttgagcagttttgtatcaactatgccaatgaaaag
cttcagcagcagtttaacttgcatgtgttcaaactggaacaagaggagtacatgaaagaa
gacattccatggacgttaatagatttctatgacaatcagccagtcattgacttgattgaa
gccaaaatgggaatcctggacttgcttgatgaagagtgtttgtttcctcaaggcactgat
caaagttggctccaaaaactgtccaactatctgaacagcaatcctttgtttgagttgccc
aagctgtcaaatgagacctttatcattcaacactttgcagacaaggtggagtatcagtgc
aaaggttttcttgagaagaaccgagatgctctttatgaagaactggttgaggttttgaaa
gccagtaagttcgcctttctggccaaattttttcaagaggaggggcagagtgttccgaac
ataaaaggcatcaaagtgaagccggccaagcctggtgtgaaatcggccaataaacagctg
agggcctcagttggagataagttctgcagctctctctcgctgctgatggagacactgaat
gctacgacccctcactatgtgcgttgcattaagccaaatgatgaaaagctgccatttgaa
tacgattccgggagggtggtgcaacagctgcgggcctgtggagtgcttgaaacaattcgt
atcagtgcccaaagttacccttcaaggtggacctactttgagttttacagccgctacaat
gtcctaatgaccaatgaggaggccagcctcgatgacaagacacagacgtgcaaatatgtg
cttcagaggttgattcaggacccgaaccagtataagtttggtcgcacaaagatcttcctt
cgagctggtcaagtcgcatatttagaaaagctgcgtctggatcgactaagagcggcttgc
attaccattcagaaatacgtccgtgggtggaaccagagaaggaaataccaacgcttgagg
caggcagccatcctggttcaacagtacgtccgtggcaagaggactgtacgtaaagcggtg
agcgcagcaaacctgaagcggggctggtcagcagtggtcattcaaaggtactggagaggc
ttccgcatacagaagagctatcaaacggtacgcttggccatcatcaccatccaagctttc
acacgaggttggcgggcccgtaaatcctattcacagctggtggaagcacgcaaggcgttg
gtgctgcagaagtacgccagagcatggctggctcggcgacgttttaaagccatgcgtcaa
ctggtgcatcaggttcaactgtccttcagggtacagcagctccgaaagaagaatgaggag
cagagtaaagagaaccgcggtttggtggaaagactgacgagtttggccaactcccattca
caagccatggataggctgcatgctctggaggcacagctggaaaaatcagctgtccagaag
gcatcgttggaagcaagagagaagaaagccaaagaagatgcttctctgaaattgactgat
cttcaaagtgaagttgatgggttaatcattaaaaaacagaccatggagaaaacgtttgaa
gcttccgctcaacagcaacaagaaaagtttgatcaaataaagatgactctactggaagag
aaagaaaatcaagcaaggcttcgaaaaatcgctgagaacaaacttgacatccagagagag
gaacacgagaaggagctggcaatcctgaaagaagagctcaggaggctgaaggacgagaga
gtcagtctgaagatgaagttggaagacggcgaacaaatgagcgccgacctgcaggatcaa
gtggcccagctcaccaagcacgtcaaggtcattcctgagctccgcagagacctcagcaac
ctccagaatcaaaagcaaaccatagaccgaaagatgaagcaacagtctgaagaagcgaga
gctaaactgcacgatatttcaaaagtactctcaggaagcgttgttaaagaagaggtgctt
ctggggataactgcagattattctgagaagacatatgaagctgaagaccttctggcagcc
tttaatggtctcgagaaagctaccagaacgctggagaaccaccgcaaggagcagaaggaa
atctatgagactcaaatagaaggcttgagactgaaagtggattaccttcaaaatgagaac
agcagcctgcaaactttttttaccgagaaaaataacatgaatgagaacattcgccaagag
gtgatccggctgagcagcgagaacgccgtaatacctgagctgaaagttcagatttcagag
ctgcaaagacaaaaacatgagtgtgaggttcttgtagaagagcagagaaaagagttagag
gaaaaagcagatgagattaaaaatactcttcaaaagaaggtggaagaagagagttcaaag
tgcaggaactttgaggatcaaactcaggtgctggaggaggcaaagacgactcttcaaggt
caaatcaaagaccttcaagaggagaatgatcacctgagcaggcaactgcagatggagaga
gatgccaagatccgactgagactagaagccgccgagttatcttctagaaatttggacttt
gaggagcaacttgaccagaaggaaagagtcattaaacaattagagaatcaaatgataagc
cttgaaacagcacaaaaagcccagaaaacgtcttcacctgttcccaaacattatctcgga
atgttggagtacaacctagaggatgaatctcgactcattcaaaaccttattttagacctg
aagcccaaaggtgtggcggtcaacatgattcctgtcttgccagcttacattctcttcatg
tgcatacgccatgctgactacatgaacaacgaagacaaactccggtcttttatgaatgcg
actattagtgctgtcaaaaaggtcaccatgactcaccagaatgacttggccttattgtcc
ttctggctgtccaacatgtatcagttgctcaactgtcttaagcagtacagcggagaagtg
gagttcagcaagcacagtaccgcccgtcaggtgaacaactgcttgcagaactttgatttg
tcagaccatcagcaggttgtcagcgacttggctatctgcatctaccaccagttcatcgcc
gccatggaaagagctctcacccctgcgattgtgcccggtatgttggagcatgaaagcttg
cagggcatttccagcatgaaactaaggggcttccttaaacgttctcgcaaaaacaacgat
gacatggaaacctacaccatctccttcatcattcagcgactctctcacttccacagcaac
atgacacagcacggcaccgagccgcatctcattaaacaggtggtcaagcaactgctcttc
cacatcggggcgaccaccctcaacaacctgctactgcgtaaagacatgtgttcctgcaga
aaaggaatgcaaatcagatgcaacatcagctacctggaagagtggcttcaggagaaagac
ttccagagttgtcattttatcgacactctgaagcccttgatcgaggccgcctggctgctg
caggtcagcaagtccacagatgacgacgctaaggccatcacagagaaatgcactgagctc
aacacagttcagatcgtcaagattctgaattcatacacacccgtcgacctttttgagaag
agggtggcgtcgtcatttgtgcgcaaagttcagtcacttcgacaagatcacgacagcgct
gcgcagctgatgatggatgcacattatcgtttccccgttacgtttcctttctgcgtgtcc
tcgcaggctttggagctgctgcaggttcccagtagccttcacctggaattcctaaccatg
atctga
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integrated database retrieval system
