Hippocampus comes (tiger tail seahorse): 109508255
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Entry
109508255 CDS
T04969
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109508255 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109508255 (smarcd1)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109508255 (smarcd1)
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109508255 (smarcd1)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109508255 (smarcd1)
PBAF complex
109508255 (smarcd1)
GBAF(ncBAF) complex
109508255 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
109508255
NCBI-ProteinID:
XP_019713698
UniProt:
A0A3Q2XK50
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MAARGGFQSAPTGGGGGVMGPGPPVPGAGPGMGPGTPSGRMGSSPAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGGSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQSRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINHLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVSNPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagagggggctttcagtcggcacccactggtggcggaggcggcgtaatgggt
cccggacccccggtaccgggcgcggggccaggcatgggccctggtacgccctctggaaga
atgggttcgtcgccggccgcgcagaaccacatgtaccgctcgccaatgcctgggccaggg
tacccgagacctggcatgcctccatccagtcgtatgaccccacagggacccgccatgggc
cccccgggctatggcggcagccccgtgtctcgcccagggatgcctggcgtgatggacccg
tctcgtaagaggcccgccccgcagcagatccagcaggttcagcagcagagtcgcaaccag
catacaaagaagaagaagatggccgataaaattctacctcagaggatcagggaactggtc
ccggagtctcaggcttacatggatctactcgcctttgaaaggaagctggaccagaccatc
atgcgcaagaggctggacatccaggaggcactcaagagacccattaagcaaaaaagaaag
cttcgtattttcatatcaaataccttcaatccagccaagcccgacgctgaggatggtgag
ggcactgttgcatcatgggagctccgtgtggaggggcgtctacttgaagatacagccgtg
tccaagtacgaagccaccaagcagaagagaaagttctcttccttcttcaagtctctggtg
attgagttggacaaggatctttacggtcccgataatcaccttgtggaatggcacaggact
gcaaccacccaggagactgatggctttcaagtaaagagacccggcgacgtgggtgtccgt
tgcactgtcctgctcatgctggactaccagccgccgcagttcaagctggaccctcgcttg
gctcgcatgctgggcatccacacccagacgcgacctgtcatcatccaggccctgtggcag
tacgtcaagactcacaaactgcaggacccccatgagcgagagttcatcaactgcgacaaa
tacctgcagcagatctttgagacccagaggatgaagttctccgagatcccacagcgcttg
catgcgctactgatgcctcccgagcccatcatcatcaaccatgtgatcagcgtggacccc
aacgaccaaaagaagacggcatgctacgacattgacgtggaggtagacgacacgctgaag
actcagatgaactccttcctgctgtccaccgccagtcagcaggaaatagcaggcttggat
aacaagatccacgaaaccatcgagaccatcaaccacctgaagacccagagagagttcatg
ctcagcttcgcccgagatcctcagggcttcatcaatgactggctgcagtcgcagtgcagg
gacctcaagaccatgacagacgtggtgagcaaccctgaggaagagaggcgggccgagttc
tattaccagccatgggctcaggaggccgtgtgccgttacttctactccaaggtgcagcag
aggcgacaggaactggagcaggcgcttggaatcaggaacacctga
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integrated database retrieval system
