Hippocampus comes (tiger tail seahorse): 109508321
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Entry
109508321 CDS
T04969
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq02010
ABC transporters
hcq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109508321
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109508321
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcq02000
]
109508321
Transporters [BR:
hcq02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109508321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
109508321
NCBI-ProteinID:
XP_019713776
LinkDB
All DBs
Position
Unknown
AA seq
2305 aa
AA seq
DB search
MSQRTQLALLLWKNLTYRRRQKLQLLVEIVWPLFIFFILIGVRLSYPPYEQHQCHFPNKA
MPSAGTLPWIQGILCNANNPCFRGPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
NLEGFKELARALRKLQSSRTGFKLKHFLQDEETLSGFLLKNVSFPASTVAHILEADVDLE
KVLLSGFGLRLRDACPRRPGGRSLREFVNISDPAAAMMVQEVVCGAPLVWLDHAERRFLD
NVDFLKPVLRDVRSDPEAIRGVSAATTKLLDSLGSLAVELAGMKSWVDLRKEIIFLTRNA
TSSPSAMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDDAAAQRYDNSS
TPFCNSLVRDMDSNPMSRMIWEAIKPLLMGKILYTPDTPATRRVIHEVNRTFQELGVFRD
LEGMWEEMRPKVWNFLENSEQMNLLRSLLKNNVTAAYFHAHLAATDWTVADVSDFLSRHA
DGRRASGGALTWRDVFNETDQAVTGISRFMECVNLDKLEPVPTEEHMINQSMVLLEDRKF
WAGIVFPDVGANATELAPNVSYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYVWGG
FSYLQDVVEQALVRAMTGTKEKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMFSV
SIILKSVVYEKEARLKETMRIMGLDNGILWFSWFVSSLVPLLISAGLLVLMLKKGNLLPY
SDTGVVFLFLASFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDHIG
FGAKVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVASPLEEDDFSLRTAIIIMYFDS
FLYGLLTWYIEAVFPGQYGIPRPWYFPVTKSYWLGEEENKSNAAPPRRRGDPAAVCVEEE
PAHLEPGVYIENLVKVYRHGKKVAVDGLTLGFYEGQITSFLGHNGAGKTTTMSVLTGLFP
PTSGTAYILGRDIRTELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEERVKGE
MEQILRDTGLPRKRKSKTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIW
DLLLKYRPGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVK
KEPEPEPEPSLGSCRNSSSTVSFGKKDESGSVSSSSDAGLGSEQESDAATVVENGQSAAA
GGAACDAPPPPVDTSQVSGLILRHVPGARMVEDLGHELTFVLPYSAAKDGAFVELFREMD
DNLSHLNISSYGVSDTTLEEIFLKVAEDNGVDTDVPSDGTLPVRRRRRTHAFGGGDPQSC
LRPLTDERDDDDDAADGDPESRETDRLKCVGGKGSAKVSGWNLTKQQFVALMWKRFLFAR
RSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPGDATT
RKLLASLLDPPGLGTRCMLGHPVAEAPCTMGDDDWSVPEVPESVRQLFASGNWTMEDPSP
ACSCSCDGRKKMLPDCPAGAGGMPPPEMKLSSTDTLQNLTGRNVSDYLVKTYAQIIGKSL
KNKVWVNEFRYGGFSLGARSTHVLPPADEIDDAIRRIRKIFELTEGAAADRFLDNLSAFI
NGLDTKNNVKIWFNNKGWHSMGSFINVMSNAILRANLPPGKDAGRYGIRAFNHPLNLTKE
QLSQVALVTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKTKHMHFISGVHPLLYWTA
NFIWDMCNYVVPATLVVLIFVCFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFVFS
IPSTAYVVLTSVNILIGINGSISTFVMELFGDHEIGGINDILKNVLLIFPHFCLGRGLID
MVKNQAMADALQRFGENRLRSPLEWDMVGKNLFAMAVEGVVFFVITVLIQYRFCVKPRPV
SHMTKLGVLGEEDEDVARERQRIVHGLGHGHILELRQLTKVFKRKQKPAVDRLCVGIPPG
ECFGLLGVNGAGKTTTFKMLTGDTVVTSGEAFLAGKSILRELDQVHQNMGYCPQFDAVNE
LLTGREHLELYAILRGVPGKEVCDVAEWGIRKLGLLKYADKAAGSYSGGNLRKLSTAMAL
IGAPPVVFLDEPTTGMDPKARRALWNCILDVIKEGRSVVLTSHSMEECEALCTRMAIMVN
GRFKCLGSVQHLKNRFGDGYTIILRVAGPDPDLLPVMKFIESELSGSTLKEKHRNMLQYQ
LPSSRCSLTHIFFTLANNKHALKIEDYSVTQTTLDQVFVNFAKDQSDDYHSKDVHSSSPS
TKRRRGRSAVRVDLPPAECAKESIM
NT seq
6918 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcgcacgcagctggccctgctgctctggaagaacttgacgtaccgacgcagg
cagaagctccagctgctggtggagatcgtgtggccgctgttcatcttcttcatcctgatc
ggcgtgcgcctcagctacccgccctacgagcagcaccaatgtcacttccccaacaaggcc
atgccgtcggcgggcaccttgccgtggatccagggcatcctctgcaacgccaacaacccg
tgcttccggggccccacgccgggcgagtcgccgggcgtcgtcggcaacttcaacgactcc
ataatctctcgtctcttctccgacgccaagaagattcttctgtacagtcagaacgacaaa
aacttggagggcttcaaggagctcgcccgcgccctccgaaagctccagagcagcagaaca
ggcttcaagttgaagcacttcctgcaagatgaggagactttgtccggcttcctgttgaag
aacgtgtcctttcccgcttccacggtggctcacatcctggaggccgacgtcgacctggag
aaggtcctcctgagcgggttcgggctccgcctgcgtgacgcgtgtcctcgcaggccgggc
ggccgcagcctgcgggagttcgtcaacatcagcgaccccgcggccgccatgatggtacag
gaagtggtgtgcggcgccccgctggtgtggctggaccacgccgagcgccgcttcctggac
aacgtggacttcctcaaacccgtcctgagggacgtcagatcggaccccgaagccatccgg
ggcgtttccgcggcgaccaccaagctgctggacagtctgggctcgctggccgtggagctg
gccggcatgaagagctgggtggacctgaggaaggagatcatcttcctgacgcgcaacgcc
acgtcctcgcccagcgccatgtaccaggccgtgtcgcgcatcgtctgcggccatcccgag
ggcggcggcctgcagatcaagtctctcaactggtacgaggacagcaactacaaggcgctc
tttgggaaccacaacagcagcgaggacgacgccgccgcgcagcgctacgacaactcctcc
actcctttctgcaacagtctggtgagggacatggactccaatcccatgtccaggatgatc
tgggaagccatcaagccgctgctgatggggaagatcctctacactcccgacacgccggcc
acgcgcagggtcatccacgaggtgaaccggacatttcaggagctgggcgtgttcagggac
ttggagggaatgtgggaagagatgcgacccaaagtttggaacttcctggagaacagcgaa
cagatgaacctgctgcggtctctgctgaaaaacaacgtgaccgccgcctacttccacgct
cacttggccgccaccgactggacggtggccgacgtctccgacttcctgtccaggcacgcc
gacgggcggcgggcgagcggcggcgccctcacctggcgggacgtcttcaacgagaccgac
caggccgtcaccggcatctcccgcttcatggagtgcgtgaatctggacaagctggagccc
gtccccaccgaggagcacatgatcaaccagtccatggtcctgctggaggacaggaagttc
tgggccgggatcgtcttcccggacgttggcgccaacgccacggagctcgcccccaacgtc
agctacaaaatccgcatggacatcgacaacgtggagcggaccaacaagatcaaagacgcg
tactgggacccgggtcctcgggcggaccccttcgaggacatgcgctacgtttggggaggc
ttctcctacctgcaggacgtggtggagcaggccctggtccgagccatgacgggcaccaag
gagaagacgggcgtctacgtccagcagatgccctacccgtgctacgtggacgacatcttc
ctgcgggtgatgagccgctccatgccgctgttcatgacgctggcctggatgttctccgtg
tccatcatcctgaagagcgtggtgtacgagaaggaggcgcgtctcaaggagaccatgagg
atcatggggctggacaacggcatcctgtggttcagctggttcgtcagcagcctcgtccct
ctgctcatcagcgccggactgctggtgctgatgctcaagaaaggaaacttgctgccgtac
agcgacaccggcgtggtcttcctcttcctggcgtcctttgccgtggtgaccatcatgcag
tgctttctcatcagcacggcgttcgctcgagccaatttggccgccgcctgcgggggaatc
atctacttcaccctgtacttgccttacgtactctgcgtggcctggcaggaccacatcggc
ttcggcgccaaggtctttgcgagtctcctgtcccccgtggcttttggcttcggctgcgag
tacttcgctctgttcgaagagcagggcgtcggcatccagtggaagaacctggtggccagt
cccctggaggaagacgactttagcctgcgcaccgccatcatcatcatgtacttcgactcc
ttcctgtacggactcctcacctggtacatcgaagccgtctttccaggccaatacgggatc
cctcgcccgtggtacttccccgtcaccaagtcctactggctcggcgaggaggagaacaag
tccaacgcggcgcctccgcgccgcagaggcgaccccgccgcggtgtgcgtggaagaggaa
ccggcccacctcgagcccggcgtctacatcgagaacctggtgaaggtttaccggcacgga
aagaaggtggcggtggacgggctgacgctgggcttttacgaggggcagatcacctccttc
ttgggacacaacggcgccggaaagaccaccaccatgtcggtcctcaccgggctgttcccg
cccacctccggcaccgcctacattctgggtcgagacatccgcacggagctgagcgccatc
cgtcagagtctgggcgtctgccctcagcacaacgtcctcttcagcatgttgacggtggag
gagcacatctggttctacgcccgactcaaaggcctgtcggaggagcgggtgaaaggcgag
atggagcagatcctccgcgacacgggcctgccgcgcaaacgcaagtccaagaccagcacg
ctctccggcggcatgcagaggaagctgtccgtggccttggcgttcgtcgggggttcgaag
gtggtgatcttggacgagcccacggccggagtggatccttacgctcgcagggggatctgg
gatctgctgctgaagtaccgaccgggtcgcaccatcatcctgtccacgcaccacatggac
gaggccgacatcctgggcgaccgcatcgccatcatctcgcacgggaagctgtgctgcgtc
ggctcgtcgctctacctgaaaaaccagctggggacgggctactacctgaccctggtcaag
aaggagcccgagcccgagcccgagccctcgctcggctcctgcaggaactcctccagcacc
gtgtccttcggcaagaaggacgagagcggttccgtcagcagcagcagcgacgccgggctg
ggcagcgagcaggaaagtgacgccgccaccgtcgtagaaaatgggcagtcggcggcggcg
gggggggcggcatgcgacgcgccgcccccgccggtggacacgtcgcaggtgtcgggcctg
atcctgcgccacgtccccggcgcccgcatggtggaggacctggggcacgagctgaccttc
gtcctgccttactcggccgccaaggacggcgccttcgtggagcttttccgcgaaatggac
gacaatctgagccacttgaacatctccagttacggcgtgtccgacaccaccttggaggag
attttcctgaaagtggccgaagataacggcgtggacacggacgtgccctcggacggcacg
cttcccgtccggcgacgacggcggacccacgccttcggaggaggcgaccctcagagctgc
ctgagacccctgacggacgagcgcgacgacgacgacgacgcggccgacggcgatccggag
agtcgagaaacggacaggttgaagtgcgtcggcgggaaaggatcggccaaagtgagcggc
tggaatctgaccaaacaacagtttgtggcgctcatgtggaagagatttcttttcgcccgg
cgctcccgcaaaggattcttcgcccagatcgtcctgcccgccgtcttcgtctgcatcgcg
ctggtcttcagtctcatcgttcctcctttcgggaaatatcccagtttggagctgcagccc
tggatgtacgaagaccaggtcaccttcatcagtgacgacgcgccgggagacgccaccacg
cggaagttgctggcttctcttttggacccgccgggcctggggacgcgttgcatgctgggc
catcccgttgcagaggcgccttgcacgatgggcgacgacgactggagcgttccggaggtc
ccggagagcgtccggcagctcttcgcgtccgggaactggaccatggaggacccgtcgccg
gcctgctcctgcagttgcgacggcaggaagaagatgctgcccgactgccccgccggcgcc
ggagggatgcccccgcccgagatgaagctgagctccaccgacacgctgcagaacctgacg
ggccgcaacgtctccgactacctggtcaaaacctacgcgcagatcatcggcaagagtttg
aagaacaaagtttgggtcaacgagttcaggtacggaggcttctcactgggcgccaggagc
actcatgtcctcccgccggccgacgagatcgacgacgccatccgccgcatccggaaaatc
tttgaactgaccgagggagcggcggccgaccgatttctggacaatttgtcagctttcatc
aacggtttggacaccaagaacaatgtcaagatctggttcaacaacaaaggctggcacagc
atgggctccttcatcaacgtgatgagcaacgccatcctgagggccaacctgcctcccggc
aaagacgccggccgctacgggatccgagccttcaatcatccgctcaacctgaccaaggag
cagctgtctcaggtggcgctggtcacgacctcggtggacgtgctggtgtccatctgcgtg
atcttcgccatgtccttcgtcccggccagctttgtggtcttcctcatccaggagcgcgtg
agtaagaccaagcacatgcacttcatcagcggcgtgcaccccctcctctactggaccgcc
aacttcatctgggacatgtgcaactacgtggtcccggcaacgctggtggtcctcatcttc
gtgtgcttccaacaaaaagcttacgtctcctccaccaacctgcccgtgctcgctctgctt
ctcctgctctacgggtggtccatcacgccgttgatgtacccggcctcgttcgtcttcagt
atccccagcacggcctacgtggtcctcaccagcgtcaacatcctcatcgggatcaacggc
agcatctccaccttcgtcatggagctcttcggggatcacgaaatcggaggcatcaacgac
attctgaagaacgttctgctcattttccctcacttctgtttggggcggggcctcatcgac
atggtcaagaaccaggccatggccgacgccttgcagagattcggagagaacaggctgcgt
tctcctctggaatgggacatggtgggaaagaatttgttcgccatggcggtggaaggcgtc
gtcttcttcgtcatcaccgtcctcatccagtacagattctgcgtcaaacccagaccggtg
agtcacatgaccaaactgggcgttctcggagaggaggatgaggacgtcgctcgggagaga
cagcgtatcgtacacggactcggacacggacacatcctggaactccgacaactcaccaag
gtgttcaaaagaaaacagaagccggcagtcgatcgactttgtgttggaattcctccaggc
gagtgtttcggcctgctgggcgtgaacggagcgggaaaaacgaccaccttcaaaatgctg
acgggtgacaccgtggtgaccagcggcgaagccttcctcgctgggaagagtatcctgcgg
gagctggaccaggtccatcagaacatgggctactgcccccagttcgatgccgtcaacgag
ctgctgacaggaagagaacatctggagctctacgccatcctgagaggagtccccggcaag
gaagtctgcgacgtggccgagtggggcatcaggaagttgggcctgctcaagtacgccgac
aaagccgcgggaagttacagcggcggcaatctacgcaaactctccaccgccatggcgctc
atcggcgccccgcccgtcgtcttcctggacgagccgaccacgggcatggaccccaaagcc
cgtcgagcgctctggaactgcatcctggatgtcatcaaggagggacgctccgtggtgctc
acctcgcacagcatggaggagtgtgaggcattgtgcacccgcatggccatcatggtgaat
ggcaggttcaaatgtctcggcagcgtccaacatttgaagaacaggttcggcgacggctac
acgatcatcctgcgcgtggcggggcccgaccccgatctccttcctgtcatgaagttcatc
gagagcgagctgagcggcagcacgctgaaggagaaacaccggaacatgctgcaataccag
ctgccgtcgtcgcgctgctcgctcacgcacatcttcttcacgctggccaacaacaaacac
gcgctgaaaattgaagactactccgtcacgcagaccacactcgaccaggtgttcgtgaac
ttcgccaaggaccaaagcgacgactatcactcgaaagacgttcactcttcctcgccctcg
acaaagcggcgccggggcagaagcgcagtccgagtggaccttcctccggcggagtgcgcc
aaagagagcatcatgtga
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integrated database retrieval system
