Hippocampus comes (tiger tail seahorse): 109508323
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Entry
109508323 CDS
T04969
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03020
RNA polymerase
hcq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109508323 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
109508323 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109508323 (polr2b)
03400 DNA repair and recombination proteins [BR:
hcq03400
]
109508323 (polr2b)
Enzymes [BR:
hcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109508323 (polr2b)
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109508323 (polr2b)
DNA repair and recombination proteins [BR:
hcq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109508323 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
109508323
NCBI-ProteinID:
XP_019713780
UniProt:
A0A3Q2Y0C0
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDQDEENQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAFTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTKETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPDNDDELDSSNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagagaaccagtacgatgaggacgacgacgagatcacgccggat
ctgtggcaggaagcctgctggatcgtcatcagctcctattttgacgagaaggggttggtg
cggcagcagctggattccttcgacgagttcatccagatgtcggtccagaggatcgtggaa
gacgcgccgcccatcgacctgcaggccgaagcccagcacacctcgggagaagtggaggag
cccccgcgatacctgctgaagtttgagcagatctacttatccaagcccacccactgggag
cgagacggcgccccgtcgcccatgatgcccaacgaggcccgactgcgaaacctcacatac
tcggcccccctgtatgtggacatcaccaagaccatcatcaaggagggcgaggagcagctg
cagacgcagcaccagaagaccttcatcggcaagatccccatcatgctgcgctccacctac
tgcctgctcagcggcctgacggaccgcgacctgtgcgagctcaacgagtgcccgctggac
cccggcggctacttcatcatcaacggctcagagaaggtgctgatcgcccaggagaagatg
gccaccaacacggtgtacgtcttcgccaagaaggactccaagtacgccttcaccggcgag
tgccgctcctgcttggagaactcgtcgcgtcccaccagtaccatctgggtcagcatgatg
gcgcgaggaggacagggcgtgaagaagagcgccatcggccagaggatcgtgtccacgctg
ccgtacatccgccaggaagtccccatcatcatcgtgttccgagcgctgggcttcgtgtcg
gatcgagacatcctggagcacatcatctacgacttcgacgaccccgagatgatggagatg
gtgaagccgtcgctggacgaagccttcgtcatccaggagcagaacgtggccttgaacttc
atcggctccaggggcgccaaaccgggagtcaccaaagagcgccggatcaagtacgccaaa
gaagtgctgcagaaggaaatgctgccccacgtcggcgtcagcgacttctgcgagaccaag
aaggcctacttcctcgggtacatggtccacagactgctgctggccgccctgggcagacga
gagctggacgacagggatcactacggcaacaagaggctggacctggccggaccgctcctg
gccttcctcttcagagggatgttcaagaacctgctgaaggagattcgcatctacgcgcaa
aagttcatcgaccgaggcaaagacttcaacctggagctggccatcaagaccaggatcatc
tcggacggactcaagtactcgctggccaccggcaactggggcgacgtcaagaaggcccac
caggcccgggccggcgtgtcccaggtgctgaaccggctcaccttcgcctccaccctgtct
cacctgcgccgcgtcaactctccgatcgggcgcgacggcaaactggccaaacccaggcag
ctgcacaacacgctgtgggggatggtgtgccccgccgagacccccgagggtcacgctgtg
ggcctggtgaagaacctggccctgatggcttacatctcagtgggatctcaaccttctccc
atcctggagttcttggaggagtggagcatggagaacctggaagagatctcgcccgccgcc
attgccgacgccacaaagatcttcgtgaacggctgctgggtcggaatccacaaggatccc
gagcagctgatgaacacgctgcgcaagctccggcgccagatggacatcatcgtgtccgag
gtgtccatgatccgagacatccgagagcgcgagatccggatctacaccgacgccggacgc
atctgcagaccgcttctgattgtcgagaagcagaaactcttgctcaagagacgacacatc
gaccagctcaaggagcgggagtacaacaactacagctggcaggacctggttgccagcggc
gtggtggagtacatcgacacgctggaggaggagacggtgatgctggccatgacccccgat
gacctccaggagaaaggcgtggcctactgctccacctacacccactgcgagatccacccg
tccatgatcctgggggtgtgcgcctccatcatccccttccccgatcacaaccagtctccc
aggaacacgtaccagtcggctatgggcaagcaggccatgggcgtctatatcaccaacttc
cacgtccgcatggacacgctggcgcacgtcctgtactaccctcagaagccgttggtcacc
acgcgctccatggagtacctgcgcttcagagagctgccggcaggcatcaactccatcgtg
gccatcgcctcgtacacgggctacaaccaggaggactcggtcatcatgaaccgctcggcc
gtggaccgaggcttcttcaggtccgtcttctatcgctcctacaaggagcaggagtccaag
aagggcttcgaccaggaggagatcttcgagaagcccaccaaggagacctgccaggggatg
cgccacgccatctacgacaagctggacgacgacggcctgatcgccccgggcgtgcgcgtg
tcgggcgaggacgtgatcatcggcaagacggtgacgctgcccgacaacgacgacgagctg
gacagcagcaaccgccgctacaccaagcgcgactgcagcaccttcctccgcaccagcgag
accggcatcgtggaccaggtcatggtcacgctcaaccaggagggctacaagttctgcaaa
atccgggtccgttcggtccggatccctcaaatcggagacaagtttgccagcaggcacggg
cagaaaggaacctgcggcatccagtacaggcaggaggacatgcccttcacgtgtgagggc
atcacacccgacatcatcatcaacccgcacgccatcccctccagaatgaccgtcggccat
cttatcgagtgcctgcagggcaaggtttcggccaacaaaggcgagatcggcgacgccacg
cccttcaacgacgccgtcaacgtgcagaaggtgtccaacctgctctcggagtacggctac
catctgagggggaacgaggtgctgtacaacggcttcacgggccggaagctgacgtcgcag
atcttcatcgggcccacgtactaccagcgcctcaagcacatggtggacgacaagatccac
tccagggcccgcggacccgtgcagatcctcaacaggcagcccatggaggggcgatcgcgg
gacggcggcctccgtttcggcgagatggagcgcgactgccagatcgctcacggcgccgcc
cagttcctgcgcgagcgtctcttcgaggcgtccgacccctaccaggtgcacgtctgcaac
ctgtgcggactcatggccatcgccaacacgcgcactcacacctacgagtgtcgcggctgc
cgcaacaagacgcagatctcgttggtgcggatgccgtacgcgtgcaagcttctcttccaa
gagttgatgtccatgagcatcgctccccgcatgatgacggcgtag
DBGET
integrated database retrieval system
