Hippocampus comes (tiger tail seahorse): 109508424
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Entry
109508424 CDS
T04969
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03013
Nucleocytoplasmic transport
hcq03015
mRNA surveillance pathway
hcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109508424
09122 Translation
03013 Nucleocytoplasmic transport
109508424
03015 mRNA surveillance pathway
109508424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109508424
03041 Spliceosome [BR:
hcq03041
]
109508424
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109508424
Spliceosome [BR:
hcq03041
]
Complex C
Other components
EJC/TREX
109508424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
109508424
NCBI-ProteinID:
XP_019713950
UniProt:
A0A3Q2YV56
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MADEDITLDGQPLQSLRVADLKAALEKRNLSKSGAKNKLIQRLKGALMLENLQKSSTSHS
GLQPNSQIGEEMSQNSFIQQYLAKQQELLRHRLEREAQLQEEADESPAMPEEDEDQSDND
TSSCVSDKPNPALAERAGCLRGEGVSHRPDGTTGHQAAPEAPGARMQRATFPQGHKEPPA
PSPPRAVASLSVRVLGQPDRQGLPPALSRAQEKEGVAPSETGSAHSVLHLSRSAGVSATV
QQDSDEDDDDDDNSGDDEDWGPGPVGARKGNQAPPRPPQMPASSVRSKRKLQPPQHIPPP
QPHQNLMQLRHPTPPPSPPPDLFPLPDTPKQSPPDTDDKEGECSGAPPSIPPHTSQGRDS
DSRSRSSSPEPPVKRRPGPLSLLVHKMESEEAQTSAGTSESPEGSEKKENEMSDRKAEDA
KARDEEELGEKKQAAGKKSTAGDRDLGSSSDPDSQSDSSSKSSSSSPVRVQSRHVRQPKG
AELGQDADNETKGTGTEKGHLLKREMSETSEAAVSEGEPRSESSEARQPAPNGEPIDGEG
RLEESTTPKAFAARKISLTSSKTPPVDADGGAGDADTGAAAGRKRRWGSSTAVTAKKPSI
SITTDSLKSLIPDIKIAQEAVVDLHPEELQLSGDEDNKDNGQGDEDDGLKIRRTVTQVVP
GDSQENGRGDEEEDAETAESEIPRPPPVEQSKPIPPEKTAEKPDGDPKKASTDDGLVRRS
ISQQRSGVSITIDDPIRSTRKPSPPRGKLSNIVHVTNLVRPFTVGQLKELLKQTGSMVED
GFWIDKIKSHCYVTYTTTEEAAATRESLHGVKWPQSNPKVLSVDFCEQDELDFHKGLLKP
NHAEPQVPQPAPPPSRPPPLMPERDRERDRERERDREHERGAPAVRDLWAERQRQMERRE
RARGEREWDRDKIREFARPGADKGERRSRSRDRDREREKERRRRERPKSKERKTDKKEKA
DEPPAKLLDDLFLKTKAAPCIYWLPLTEEQVVQKVLERSERQKERERRLKELQDEQEKVR
EERKKERLKAREKEDRGGATASSRAADADREKERSRNKDGERRREGERRPGRPPLGRRSR
SCSDTRDRRH
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggatattacgcttgatggacagcctttacaatccctccgagtcgcggat
ttgaaagccgcgctggagaagagaaacctgtctaagagcggggcgaagaacaaactcatc
cagcgactgaagggggcactgatgctggagaacttgcaaaagtcatccacctctcacagt
ggactgcagccaaactctcagatcggtgaggagatgagccagaatagcttcatccaacag
tatctggctaagcagcaggaactcctccgtcatagactggagagagaagcccagcttcag
gaggaggctgacgaaagcccagctatgccagaagaggatgaagaccagtcggacaatgac
acctcatcctgtgtctctgacaagccgaatcccgctttggcagagagggcgggatgtctg
aggggcgaaggggtgtcacataggccagatggcaccactggtcaccaggcggctccggaa
gctcccggagccaggatgcagagggccacgtttcctcaaggacacaaggagccaccggcc
ccctctcccccccgcgccgtggcctccctgtccgtgcgcgttctgggtcagccggaccgc
cagggactgcccccggccttgtccagagcccaagagaaagagggcgtcgcaccgagcgaa
accggatcggcccactcggtcctccacctcagccgatcggccggcgtatctgccacggtc
cagcaggacagtgacgaggacgatgacgacgatgacaatagcggggatgacgaggattgg
gggccggggccagtcggagcgcgaaaaggcaaccaggcccccccgcggcctccgcagatg
cccgccagttctgtgaggtccaaacgtaagcttcagcctccacagcacatcccaccaccg
cagccgcaccagaatctgatgcaactgcgccacccgacgccacctccctcaccgccgcct
gacctgtttcccctaccggacactcccaagcagagtccaccggacactgacgataaggag
ggcgaatgctccggagcaccacccagcatcccgcctcacacctcgcaggggcgagactca
gactcgagatcccgctccagcagtcccgagccccctgtgaagcgcagacctggcccgctc
tctctgctggtgcacaagatggagtcggaggaggcccagaccagcgcgggcaccagtgag
tctccagaggggagcgagaagaaagaaaatgagatgagcgaccgaaaagcggaagacgca
aaagcgcgagatgaagaagagctcggggagaaaaaacaggcagctggtaagaagagcacg
gccggggatcgggacttgggctcctcgtcagatccggactcgcagtccgactcctcgtca
aaatcgtcatcctcatcgcctgtcagggttcagtcacgccatgtgaggcagccgaaggga
gccgagctaggccaagatgcagataatgagacaaaggggacggggacagagaaaggacac
ctcctgaaaagagagatgtcagagaccagtgaggcagctgtgtcggagggggagccccgc
tcagagagcagcgaggcccggcagccagcgccgaacggggagccaatcgatggcgagggt
cgcctggaggagagcaccactccaaaggcttttgccgctcgcaagatctcactgaccagc
agcaagacgccgcctgtcgatgccgacggaggggcgggagacgccgacacgggagccgcg
gcggggaggaagaggcgttggggctccagcacggcggtcactgccaagaagccgtccatc
agcatcactactgactctctcaagtctttaattccagatatcaaaatagcccaggaggcc
gtggtggacctgcacccagaggagctgcagctgtccggggatgaggacaacaaggacaac
ggccagggagacgaggacgacggtctcaagattcgacgcacggtgacgcaggtggtcccc
ggggacagccaggagaacgggcgaggtgacgaagaggaagacgcagagacggcggagagc
gaaatcccgcgaccgccccccgtagagcaatccaagccaattcctcccgagaagactgca
gagaagcccgacggagacccgaagaaagcttccaccgacgacggtttggtgcgtcgctcc
atcagtcagcagcggtccggcgtgtccatcacaatcgacgaccccatccgatccacgcgg
aagccctcgccgccccgcggcaaactttccaatatcgtccacgtgaccaacctggtgcga
ccgttcaccgtgggccagctcaaagagctcctgaagcagaccggtagcatggtggaagac
ggcttctggattgacaagatcaagtcacactgctacgtcacgtacacgacgacagaggag
gcggcagccaccagggaaagtcttcacggagtcaaatggccccagagcaatcccaaagtg
ctcagtgtggacttctgtgagcaggatgagcttgactttcacaaaggtttgttgaagcca
aaccacgcggagccgcaagtcccgcagccggccccgccgcccagccgaccacccccgctc
atgcccgagcgagaccgggagcgggaccgagagcgggaacgcgacagggagcatgagcgt
ggcgcgcccgccgtgcgggacctgtgggctgagcggcagcggcaaatggagcgccgcgag
cgggcccgcggcgagcgcgagtgggatcgcgacaagatccgggaattcgccaggccaggc
gccgacaagggcgagcggcgctccaggtcccgtgaccgagacagagaacgggaaaaggag
cggcggcggcgggaacggccaaagagcaaggagaggaagaccgacaagaaggagaaggca
gacgagcctcccgcaaagcttctcgatgacttgttcctcaagaccaaagcagctccttgt
atatactggctccccctcaccgaagaacaggtggtgcagaaggtgctggaacgcagcgag
cggcaaaaggagcgagagcggcggctcaaggagctgcaagacgagcaggaaaaagttcgc
gaggagcggaagaaggagcggctgaaggcccgggaaaaagaagatcgaggcggcgccacg
gcgtccagccgggcagccgacgccgaccgggaaaaggagcgaagccggaacaaagatggc
gagcggaggcgggaaggcgagcgccggcccgggcgaccgccacttgggcgccgctctcgt
agttgtagcgacacccgagacaggcgccactga
DBGET
integrated database retrieval system
