Hippocampus comes (tiger tail seahorse): 109508958
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Entry
109508958 CDS
T04969
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109508958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcq04515
]
109508958
Cell adhesion molecules [BR:
hcq04515
]
Immunoglobulin superfamily
ROBO family
109508958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
Unc5_NetrinR_N
Ig_PDGFR_d4
Izumo-Ig
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
109508958
NCBI-ProteinID:
XP_019714455
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MLALPTTFILISLLGVERVERGHAVDILSDKYRRNRDAITQKPELEPAADQDSSYGYKGS
RLRQEDSPPRIVEHPSDLIVSKGEPATLNCKAEGRPIPTVEWYKDGERVETDRDNPRSHR
MLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAVSHNASLEVAILRDDFRQNPVDV
MVAAGEPAVLECQPPRGHPEPTISWRKNGLNLDDREERITIRGGKLMITNSRKSDAGKYI
CVGTNMVGERESEIAELTVLERPTFLKRPSNAVVLADGSAEFHCAVQGDPVPTVRWRKDD
SELPKGRYEILEDHTLIVRQVTSSDEGSYTCVVENMVGKSETSAMLTVHVNTVPPAFALR
PRNQVAAIGRTVTFQCEATGNPQPAIFWQREGSESLLFSAPQPFSRVSVSQMGSLTITDV
QQSDGGLYSCQALNIAGSVITKALLEVTDSGSELPPPVIRQGPVNQTVPVDSTVVLSCHT
ASMPPPLVQWKKDGVVLSPVDTRLSIAESGSLEIRHTKLGDTGFYTCVASTPNGEASWTA
YLQVDEFGVIVQTSRPSSPDLMPGAPTKPEITDISPTSVTLSWKPSTNGGTMPTSYLIEA
FSHTLGSRWVTLAEHVKMQTFVLKNLKPGTVYLFMIRAVNAYGLSDPSTISDSIRTLDST
YTAEGTDPRHIQRELGDVVIHLNTPIVVSSSAVRVNWIVEQHSLYIQGYKLLYRPSAEHG
QPEGRWSVLDVRAPHKDGVVIGQLKRGAIYEFKVRPFFDEFQGADSEVKVIRTLEEAPRQ
APQDVKVTKSDTNGTVILISWKAPPVPEEAGVIQEYKIWCLGNESRYHVNQSVDGYTFSV
LVPGLSPGIRYSVEVAASNGAGPGVKSKVTFFQFDSAGQMMDLSEGKDTLSHISDVVKQP
AFIAGIGATCWFVLMFFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFTPTVAYQRGESVCN
AGRPGLLSMAEPLNQLWLPDNWPNTCANHKDCSINCCNNGNGTSDSNMTTYSRPADCIAN
YGKHPDNKHGGQLGSETAIYTDVNLSDKLNEIKTFNNSNLCYASPGGDSSDAYEPIPYAT
TQLIQASIKNKAHALEPMDMPCWNQPPNPPPLPKEMATQMQYNIMEQNILNQDHPQGNEG
LVHHKTIPYNHNQDHSMVGSLHSSDRGSNSTSGSQNQKKGPRAMKTPKHTAVSWGDALSP
PHAIAWNGDEYSLPMEKSFDPEKRTEVCPTPPIRGAASSPADMSYSQQATAHPQGITSNG
VHDGINHLSSTPLYMDTDEQEEDAEEETAHPENHYHLHKNQQHKQKLPHNSPHKLLLHRL
EQTPASSTGELDRSVTGSMVNSWGSASDDNLSSGRSSIVSTSEGSFFTDGDFSQAEGLRM
CRYPEESGQRHQRPSSPMSTDSNMSPSIMQKRPRRYKQSQCVQPSYHPKDAFNDDSLMPL
NFPSQMSHSDLRVRGATLPRMGSGEARGRRGSTGTHRIKEEPFEDGESQDVEKILPRGKG
GSKSKQHSECGDVLLYSRPSFPSGPAQSEHDDPNVSSIILCDDSRAKHRGQMESVGVDEF
LKS
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgctggctcttcccaccacattcattctcatcagcctgcttggtgtcgagcgagtggag
cgtggccatgccgtggatattttgtcagataaatacagacgaaaccgtgacgcaatcacc
caaaaacccgaactggaacctgcagcagaccaagacagcagctatgggtacaaagggtct
cgtcttcgccaagaggactcccctccccgtattgttgagcacccctcggacctgattgtg
tccaaaggggaaccagccactctcaactgtaaggcagagggccgtccaatacccacggtc
gagtggtacaaggatggggagcgtgtggagaccgaccgggacaaccctcgctcgcaccgc
atgctcttgcctagcgggtcgctcttcttcctacgcattgtccacggacggcgcagcaag
cccgacgatggcagctacgtgtgcgtggcccgtaactatttgggccaggcggtcagtcac
aatgcatcgctggaagtagccattttacgtgatgacttcaggcagaacccagtcgacgtc
atggttgcggcgggcgagcctgcggtgctggagtgccagccaccccgtggacatccggag
cccactatctcatggaggaaaaatgggttgaatttagacgacagggaggaacggattaca
atccgcggtggcaagctgatgatcaccaatagcaggaagagcgacgcaggaaaatacatt
tgcgttggaaccaacatggtcggcgagcgcgaaagtgaaatcgctgagctcaccgtgctt
gagcgccccaccttcctcaagcggcccagcaatgcggtggtgctggcagacgggagtgcg
gagttccactgtgcggttcaaggtgatcctgttcctactgtccgctggaggaaagatgat
tcggagctacctaagggcaggtatgaaatccttgaagaccacactttgattgttcgccaa
gtgacctcttcagatgagggttcctatacatgtgtggtggagaacatggttgggaagtct
gaaacatctgccatgcttaccgttcacgtcaacactgtgccgccagcatttgccttacgt
cccaggaaccaggtggcagcgataggcaggactgtcacctttcagtgtgaggccactgga
aacccgcagcccgctatcttctggcagagggagggcagtgagagtctcttgttctctgca
ccgcagccgttcagccgtgtgtcagtctcccagatgggcagtttgaccatcaccgacgtt
caacaatctgatggcggcctgtacagctgtcaggctctgaacattgctggcagcgttatt
accaaagcactgttggaggttacggactctggctcggaactgcctccccctgtaattaga
cagggcccggtcaatcagactgttcctgtggacagcactgtggtattgagttgccataca
gctagcatgccacctcctttggtccagtggaagaaggacggtgtggtgctgtcaccagtg
gacacacgtttatccatagcagaaagcgggtcactcgagattcgccacacaaagctggga
gatacaggtttctatacctgtgtggcttctactcccaatggagaggcctcttggacggca
tatttacaagtcgacgagtttggggtcattgtccagaccagtcgaccttccagtcccgac
ctgatgcctggtgctccaactaaaccagagatcactgacattagccccacttccgtcact
ctttcatggaagcccagcaccaatggtgggaccatgcctacgtcttacctaatagaggca
ttcagtcatactttaggcagcagatgggtgaccctcgctgagcatgtgaagatgcagacg
tttgtactgaagaacctgaagcctggcaccgtctacctttttatgatcagagctgtcaat
gcttacggtctcagtgaccccagtaccatctcagattcgatccgaacactcgacagcact
tatacagctgagggaactgatcctcgccacatccagagggagttgggggatgtggtgatc
cacctaaacacccccattgttgtatcatcttctgcggtccgggtaaactggatagtcgag
cagcactcgctgtacattcaaggctacaagctgttgtacaggccctcggctgaacacggt
caacctgagggccggtggagtgtcctcgatgtacgtgccccacataaggacggcgtggtg
atcggtcagctcaagagaggcgccatctacgagttcaaagtgcgtcccttttttgacgaa
ttccagggagctgacagtgaggtgaaagtgatcagaacgttggaagaagcaccaagacaa
gccccccaggatgttaaagtaacaaagagcgatacaaacggcactgtaatcctcatatca
tggaaagcacctccagtcccggaggaggcaggagttattcaggagtataagatctggtgt
ctgggcaatgagagtcgctatcacgtcaaccagtcagtcgacggctacaccttctcggtg
ctcgttcctggtctgtcacctgggatccgctacagcgttgaggtcgcggcaagcaatggt
gccggacctggtgtcaagagcaaggtcacgttctttcagtttgactctgctggccagatg
atggacctcagcgagggaaaggacaccctgtcacacatttcagacgtggtgaagcaacca
gcatttattgcgggcattggcgccacctgctggttcgtcctgatgtttttcagcgtgtgg
ctctaccgtcatcggaagaagagaagtggcctcagcagcacatacaccggcatccgcaag
gtgccgtcattcacttttacaccaactgttgcatatcaaagaggagaatctgtctgcaac
gctggcagaccgggtcttctgagtatggcggaacctctgaaccagctgtggctgccagac
aattggccgaatacatgtgccaatcataaggactgcagtatcaactgctgcaataatggg
aatggcaccagtgacagtaacatgacaacatacagcagaccagccgattgcattgccaac
tatggaaagcacccagacaacaaacacgggggacagcttggctccgagacagcgatttac
accgacgtgaacctcagcgacaagctcaatgagatcaagacattcaacaattctaacttg
tgctatgcaagtccaggaggagattcatcggatgcatatgaaccaatcccctatgctacc
acccagcttattcaggctagcattaaaaacaaggctcatgcattggaacctatggacatg
ccttgttggaatcagccaccaaatcctcctccactaccaaaagagatggccacacagatg
caatacaacatcatggagcaaaacattcttaatcaagatcatccacaaggaaatgaaggc
ttagtccatcacaaaaccatcccctacaaccataaccaagatcacagtatggtaggctcg
ctccacagctcagacaggggtagcaacagcacctcaggaagtcaaaatcaaaagaaagga
ccgcgggccatgaagactccaaaacatactgcagttagctggggagatgctctttctcct
cctcatgctattgcctggaacggtgatgagtacagcctccccatggagaagagttttgat
ccagaaaagagaacagaagtctgcccgactccaccaattagaggggcagcatcatctccc
gccgacatgtcctatagtcaacaagcgaccgcacacccacagggaatcaccagcaatggt
gtgcatgatggaatcaaccacctcagctctacccctctgtacatggacaccgatgaacaa
gaagaggatgcagaggaagagacggcacatcccgaaaaccactatcatcttcacaaaaac
caacagcacaagcaaaagttgcctcacaactccccgcacaaactgcttctccacaggctg
gaacagacccccgcctccagcaccggggagctggatagatcggtcacagggtccatggtg
aacagctggggctctgcatccgatgataacttatcatcgggcaggtccagcattgtcagc
acctcggaaggatctttcttcacggatggagatttcagtcaggcagaaggcttgcgtatg
tgcagatacccagaggagtcagggcagcgacatcagcgacccagcagtcccatgtccaca
gacagcaacatgagtccttcaataatgcagaaaagacccagaaggtacaagcagagccag
tgtgtgcaaccaagctatcatcccaaagatgccttcaatgacgactccctcatgcctctg
aatttccccagtcagatgtcccatagtgacttaagagtacggggggccacgttaccccgg
atgggttctggagaagcccggggccggagaggcagcaccgggactcaccggatcaaagag
gaaccttttgaagatggcgagagccaggacgtagaaaagattctaccaaggggaaaagga
ggcagcaaaagcaaacaacactcagaatgtggggacgttcttctgtacagtcgcccctct
ttcccatcgggtccagctcaaagtgagcatgatgaccccaacgtatccagcattatactt
tgtgacgactcgagggccaaacacagagggcagatggagtctgtgggagtcgatgagttc
ctgaaaagttga
DBGET
integrated database retrieval system
