Hippocampus comes (tiger tail seahorse): 109509853
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Entry
109509853 CDS
T04969
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109509853 (tmf1)
Membrane trafficking [BR:
hcq04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109509853 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
HH_AprE
Motif
Other DBs
NCBI-GeneID:
109509853
NCBI-ProteinID:
XP_019715275
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MSWFNASHLSTFAKQALTTAQKSIDRVLDIKEESQWSDTTLMPYEDVTLPEKLSLSGGWG
ITQWEAPPEEKVSAPAPSMAITTPVTRTVVDESENFFSAFLPPGDGQCITTSQVVSVPPA
KSQRQPRAKEKNRKNAAMKEEVETQKMVSADSNHQCQTGGDGQLVALGCSPQDTILPEPV
SPSENCGDLTCSPDDTKTNTNRGKPDSVTKVSADSNAEWPQIQTEYPVGGNPSASSEPAT
VSSESKDAKNSDPPASQSSKDVHLEQKDLKTEDRQSDTPSPPVSAFSSGTSTTSDIEVLD
HESVLSESSASSRQETGEGKASLHLMHGSFQLLSTSACGDFPRLEDYPKLTESCGSSSDA
FERIDSFSVQSLDSRSVSEINSDDDIPGSRTLASVTSAATLSADAPSDDCEKQGGGLAES
TSELQEEKEEYLTGSVRKQSVDEMEESGRSVTPVNCEQPEQLAEIEHDSGADVAQSDPSS
GAVEELLSPIAEEMKGVSTLQVWELQKVINELSSRLEKREAQLLAVSKDKAGLEEQCDNL
RDDVLTLKEESSAVQSLKDEFTQRIADTERKAQLACKERDIAKKEIKGLREELASRLHSS
VSLELIKEKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRAKEKDSEARLAKQQRKMKDLEE
ELGQLRQVLEGKEEVEKQHRDNIKKLNSAVERQEKEQSRLQTDSEELLEKNRSLQAALDN
SYKELAELHKTHASRASEAEEAALSREMKAKELQSLALEKAQEEARMQQELLANQVGDLR
LALQRAEQQQARKEDYLREEISELQQRLQEAESRNQELSESVTSATRPLLRQIENLQASL
GGQTASWEKLEQSISDRLVEAQAQLAAAVEKERAATEDLLSVKCQLASLESQNSLLRQEK
VRLLALAEAEKSRRERLEDESSRERIELENLRGQHSRVLEEAKKEKVSLCSLRFVAVVLD
EMSSFLKLLLTNQLEMEKMKVEQEKKKYYLAQEALKEKAQRSISHDPPASSTPSPSRSGS
INGADNAVLHGSILSQDDSSDQTMAGGTMSMSTSGTNLYEAARLSGGSSVVENLQSQLKL
REGEIAQLQLEITSLERSRSVMAEELVRLTNLNEDMQEQLTEISKLRIQLKDLEQRHNTI
LQMYGEKAEEAEELRLDLEDVKSMFKTQIDELLKNQK
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcatctcacctgtccactttcgccaaacaagcgctaacgacggcc
cagaaatcaatcgatcgtgtcctggacattaaagaagagagccaatggagtgacacgacg
ctaatgccttatgaagatgtgacattgcctgagaagttgtcattaagcggtggctggggg
ataacccagtgggaagcgccacctgaagaaaaggtttcagctccagctccgtctatggcc
ataactacaccggtcacccgcacggttgtggatgaatccgaaaactttttcagtgccttc
ctgccacctggagatggtcagtgcatcaccacatcccaggtagtgtccgtcccccctgct
aaatctcagaggcagccccgggcaaaagaaaagaatcgcaaaaatgccgcgatgaaggaa
gaagtggagacccaaaagatggtgtcagctgattcgaatcaccaatgtcagacaggtggc
gatggccaactggtggcgctgggctgctcgccccaggacactattcttcccgagccggtt
tctccgagtgaaaactgtggtgacctgacctgcagcccagatgacaccaagaccaatacc
aacagagggaaacctgactctgtcaccaaagtttctgccgactccaacgcagagtggcca
cagatccaaacggagtaccctgttgggggcaacccctcagcttcgtctgaacctgctaca
gtttcttccgaatccaaagacgccaagaattccgatccgccagcctcccaatcctccaag
gatgtacatttagaacagaaggatttaaaaacggaagaccgccagagtgacaccccctcc
cctcccgttagtgccttctcttcaggaacatccaccaccagtgacattgaagtcctggat
catgagagcgtactgagtgagagctcagccagctccagacaagagacgggagaaggaaag
gcgagccttcatttgatgcatggctcgttccaacttctttccacctccgcttgtggagat
ttccctcgcctggaagactatcccaagctcaccgagagttgcggttcctcttcggatgcg
tttgagcgcatcgattcattcagtgtccagtcgctggacagtcgcagtgtcagtgagatc
aactcggacgatgacatccccggcagtcggacgctggcttccgtgacttcggccgctacg
ctttcggcggatgctccgtcagacgactgtgagaaacaaggaggcggactggcggagagc
acgagcgagctccaagaagagaaggaagagtatttgaccggaagcgtgaggaagcagtct
gtggatgagatggaggagagtggacggagcgtgacgccggtgaattgcgaacaacccgaa
cagctggcggagattgaacacgattcgggggcggacgtcgcacagtccgatcccagctcc
ggggcagtcgaagagctcctttcaccaatcgccgaggagatgaaaggtgtctcaacactt
caggtttgggagcttcaaaaggttatcaatgagctgtcgagccgccttgaaaaaagagag
gctcagctgctggcggtcagcaaggacaaggctggactggaagaacagtgtgacaacctt
cgagatgacgttctaacgctgaaggaggagagctccgcagttcagtccttaaaggatgaa
tttacgcagcgcattgcagatactgagaggaaagcgcagctggcttgcaaagagagagat
atagccaagaaggaaatcaagggcctgcgagaggagctcgcctccagactccactccagc
gtttcgttggagctcatcaaagagaaggaggaacagatcagaggcctgctggaagagggt
gaaaagttgtccaagcaacagcttcagcacagcaacatcatcaagaaactgcgcgcgaag
gagaaggacagtgaggcgagactcgccaagcaacagaggaaaatgaaggacctggaggag
gagctcgggcagctgcggcaggttttggaggggaaggaagaagtagagaaacagcatcga
gacaacatcaagaagctgaattctgccgtcgagcgtcaggagaaggagcagagcaggctg
cagacggactcggaggagctgctggagaagaacagaagtctccaggcagctctggataac
tcttacaaggagctcgcagaacttcacaaaactcacgccagcagggccagtgaggcggaa
gaggcggcgctgagtcgggagatgaaggccaaggagctgcaaagcttggccctggagaag
gcccaggaggaggcccgcatgcagcaggagcttctggccaaccaggtgggtgacctgaga
ttggcgcttcagagggcggagcaacagcaggcgaggaaagaagattatttgagggaggag
atcagcgaattgcaacagaggctccaggaggcggagtcgaggaaccaggagctcagcgaa
agcgtgacttcagcaacgaggcccctgttgcgtcaaattgagaacctgcaggcctcgctg
ggtggacaaacggcatcctgggaaaaactggaacagagcatctccgatcggcttgtcgaa
gcccaggcgcaactcgccgccgcagtcgagaaggaacgcgcggccacagaagacttgctc
tccgttaagtgccagttggcctcgctcgagtcccagaattcgcttcttcgccaggagaag
gttcggctcctggcactcgcggaggctgagaagagcagaagagagagattggaagatgaa
agcagcagggagcgtatcgagttggaaaatctgcgaggccaacacagccgcgtgcttgaa
gaggcaaagaaagaaaaggtatcgctttgctccctgcgctttgttgctgttgtactcgac
gagatgtcttccttcctcaaactgctgctcaccaatcaactcgagatggagaaaatgaag
gtggaacaggagaagaaaaagtactacttagcacaagaggcactcaaggaaaaggcacag
aggagcataagccacgatcccccggcttcttccacgccctcgccgtcccgctccggctcc
ataaatggggctgacaacgccgttttgcatggctcgatcttgtcacaggatgattcttca
gaccagacgatggcgggcggaaccatgtccatgtcaacgagcggcaccaacttgtatgaa
gcggcccgcctgtccggtggctccagcgtcgtcgagaatttgcagtctcaactcaaactg
agggaaggggagatagcccagttgcagcttgagattaccagtctggagaggagccgttct
gtgatggcggaggagctggtacgactcaccaatttaaacgaagacatgcaggagcagctt
acggagatctccaagttgaggattcaactcaaggatttggagcagaggcacaacaccatc
ttgcagatgtatggagaaaaagctgaagaggcagaggagctcaggctggaccttgaagat
gtcaagagcatgttcaaaacccaaattgatgaactgctgaagaaccagaaataa
DBGET
integrated database retrieval system
