Hippocampus comes (tiger tail seahorse): 109509907 Help Entry 109509907         CDS       T04969                                  Symbol ccdc88a Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism hcq  Hippocampus comes (tiger tail seahorse) Brite KEGG Orthology (KO) [BR:hcq00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:hcq03037]     109509907 (ccdc88a) Cilium and associated proteins [BR:hcq03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    109509907 (ccdc88a) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HOOK_N DUF4472 KASH_CCD Motif Other DBs NCBI-GeneID:  109509907 NCBI-ProteinID:  XP_019715381 LinkDB All DBs Position Unknown AA seq 1845 aa AA seqDB search MKKLLLLLLGCAVQCEKKEDYIERIQTLDFNTKAAIASHIQEVTHNPENVVDLQWLESGE LPAEDLASLSRNLAFHLKHVVDDRDTQLETIVELTQERDCIQLSPLGTGPAQSPNGSPSM RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTRQELENMEVELKRIQQESYQLLS DARSARAYRDELDALREKAIRVDKLESELCRYKERLHDIEFYKARVEELKEDNQVLLETK TMLEEQLDASRSRSDKLHLLEKENLQLKSKIHDLEMERDLDRKRMEELLEENLVLEMAQK QSMDESLHLGWELEQLSKTPELTEAPQKSLGEEVNELTSSRLLKLEKDNQTLQKTVEELR GGTGSDSVAKLGKVSQENQRLNQKLEHLESELAAEKESLHSAESLSTDLMKEKALLEKTL ETLRENSERQLKGLEQENKHLSQTVSSLRQRSQVGAEARVKDVEKENRILHESICETTGK LNKMEFERKQLRKELESLKEKGERAEELEILIQKLERDNESLQKRVASLGITCEKVSALE KENTDLEAESRRLKKKLDSLKNMAFQLEALEKENSQLEQENLEVRRSAESFRSAGVKAVQ LEAENRELESERSQLKRSLELLKATSKKTERLEVSYQGLDTENQRLQKALENSSKKIQQL EAELQEVESENQTLQRNLEELKISSKRLEQLEQENKTLEQESSQLEKDKKLLEKENKRLR QQAEIRDSKLDDSNQRITILEKENRTMGKEMIFFRDSCTRVKDLERENKELVKQGTIDKR TLITLREELVSEKLRSQQTNNDLEKLTHELEKIGLNKERLLLDEDSDDRFKLLESKLEST LKSSLEIKEEKIAALEARLQESSTLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPRG VEDPQAVSKWEKESHEATRELLKVKDRLIEVERNNATLQAEKAALRSQLKQLETQSSNLQ AQIVAVQRQTASLQENNTTLQTQNAKLQVENSTLSSQGATLMAQHAQLQGQQSSVESERE GALREKEELRSTYELLLRDHEKLAALHEKQASEFEVLIGKHGGLKSSHKSLEQQHRDLED KYKQLLQRKGDLEELEKNLKEQQDKMSAENQGHRATADHCKLLKEENDRLNTTYRQLQKD NENFQLDHRSIKSQLNGAKLEQTRLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNL EEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ YKFYDPSPPRRRGNWITLKMKKFKTKSRERMRSLTLTPSRSECGDGFLSFPADSQDSSSV GSGSNSLDDTLAHKRSSRRRGQRCLVQGQGSSNALKRLPFMRNRSKDKDKAKAIYRRSMS MNDLLQTMTVAGVPGADWAGSTENLDGGEAGDVGGGRREGGGGQRMKELAFSTNAIDCAT LTLPSSAHRRAAHRLQIKDDASCEDVAGSSDDPKSQASRPSSLHSNRTTSSNSNNNSQLT SPLEAKGTFNGSTSRPHSESSGEFSLSLEQEAWSSSGSSPVQQASSSRSSRQSPGPTRQS LEPAATPGQIRKTASPGSEVLSLQQFLDEGIDPAESGSQENLTVESPRLTISSERAQKEH PAIRGRGILRSSSGKAAPVTADRPPRSSGQPGRPSLRKAESTRVRGSVRPTLSAQARATS VSERLDRASASTLPRASSVISTAEGSSRRTSIHDMLSKDNRQPVSVDGVQAPPEPSEYPS KGPSCSANLPKSLSLPCPSSDEAELPTLESFLGPSFTAESVFMDSIFSESAGKNLPFLSL NPTLVSNISGPPVAPYQPSREEGPPRSGAEHLDAEENLWFEYGCV NT seq 5538 nt NT seq  +upstreamnt  +downstreamnt atgaagaaactactgctactgcttctgggctgtgctgttcagtgtgagaaaaaggaagat tacatcgaacgcatccagactctggatttcaacaccaaagctgccatcgcttcccacatc caagaggtaacgcacaacccggagaatgtcgtggacctgcagtggctggaaagtggggag ctgcccgccgaggacctggcaagcctatccaggaatctggcctttcatctcaaacacgtg gtggatgacagggacacgcagctggagactatcgtggagctgacccaagagagggactgt attcagctgtctccgctgggtaccggtccggcccagtcgcccaacggctcccccagcatg aggaggacagagagccgacagcacctctcggtggagttggctgatgccaaggctaagatt agacgtctgcggcaagaattggaagagaagagcgagcagcttcttgacacacggcaggag ctggagaacatggaagtggagctcaagaggatccaacaggagagctaccagcttctatca gacgctcgctcggcccgggcgtaccgcgacgagctggacgccctccgagagaaagccatc cgcgtggacaagctggagagcgagctgtgccgctacaaggagagactccacgacattgag ttctacaaggccagagtggaggagttgaaggaggacaatcaggtcctgctggagaccaaa accatgctggaggagcagttggatgccagcaggagccgatctgacaaactgcacctcctg gagaaggaaaatctgcagctaaaatccaaaatccatgatctggagatggagcgagattta gatcgcaagcgaatggaggagctgttggaggaaaacctggtgctggaaatggcccagaaa cagagcatggatgagtccttacacctgggctgggagttagaacaactgtccaaaacacca gagctgactgaagcacctcagaagtccctcggtgaagaggtgaatgagctgacatccagt cggctgctaaaattggagaaggacaaccagacgctgcaaaagacggtggaggagctccgg ggaggcactggttcggactcggtggccaaactgggcaaagtcagccaggagaatcagagg ctgaaccagaaactggagcatctggaaagtgaactcgcggccgagaaagagtcactccac agcgccgagtctctgagcacggatctgatgaaggagaaagccttactggagaagacgctg gaaacgctgcgggaaaattccgagagacagctgaagggtctggaacaggagaacaagcat ctaagccagacggtgtcatccctgcgtcaacgcagccaggtgggcgccgaggctcgtgtc aaggacgtggagaaggagaaccgcatcctccatgagtccatctgcgagaccacgggcaag ctcaacaagatggagtttgagcggaaacagctgagaaaagaactggagtccttgaaagag aagggcgagagagcggaggagttggagattctgatacagaagttggagcgggacaacgaa agtctgcagaagagagtggccagtttgggaatcacctgcgagaaggtatcggcgttggag aaggagaacaccgacctggaggcggagagccggcgcctcaagaagaagctggacagtctg aagaacatggccttccagctggaggcgctggagaaggagaactcgcagctggagcaggag aaccttgaggtgcgacgctcggccgagagcttccgctcagccggggtcaaggccgtgcag ctcgaggccgagaacagggaactggagagcgagaggagccagcttaagcgcagcctggag ctcctcaaagccacctccaagaaaacagagcgattagaggtgagctaccagggcctggac accgaaaaccagcgcttgcagaaagcgctggagaacagcagcaagaagatccagcagctg gaggccgagcttcaggaggtggagtccgagaaccaaaccctccaacgcaacctggaggag ctcaagatctccagtaagcgtctggagcaactggagcaggagaacaagacgctagagcag gagagctcccaactggaaaaggataagaagctcctggaaaaggagaataagcggctgagg cagcaggcagaaatccgcgactccaagctggacgacagcaaccagcgaatcaccatcttg gagaaagagaaccgtaccatgggcaaggagatgatctttttccgggactcgtgcacacgg gtcaaagacctggagagagagaacaaggaactggtcaaacaaggcaccattgataagagg accctcatcacgctgagagaggaattggtaagcgagaagttgcgctctcagcagaccaac aacgacctggaaaaactgacgcatgagctggaaaagattggactaaacaaggagaggctg ctgctcgacgaggactccgacgataggtttaagctcctagaaagcaaactggagtcaacg ctgaagtcctcattggagatcaaggaggagaagatcgctgcccttgaggccagactgcag gagtcgtccactttgaaccagcagcttcgccaggaactcaagaccgtgaaaaagaactat gaggctctgcgtcaaagggaggaggaggagaggatggtgcagagctcgccccctagaggt gtggaggacccccaggcggtcagcaaatgggaaaaggagagccacgaggccaccagggaa ctactcaaggtcaaggacagactcatcgaggtggagcggaataatgccacgctgcaggca gagaaggcggcgctgaggagccagctcaaacaactggagacgcagagttccaacctgcag gctcagatcgtggccgtgcagagacagaccgcctctctgcaggagaacaacacgacgctg cagactcagaacgccaagctgcaggtggaaaactccacgctgagctcgcagggcgccacc ctgatggcgcagcatgctcagctgcagggccagcagagcagtgtggaaagcgagcgcgag ggagcgctgcgggagaaagaggagctcaggtccacgtacgagctgctcctgcgcgaccac gagaagctggcggcgctccatgagaagcaggcgtccgagttcgaggtgctcatcggcaag cacggcggcctgaagagctcccacaagagtctggagcagcagcatcgcgacctggaggac aagtataagcagctcctgcagaggaaaggagatctggaggagctggagaagaacctcaag gaacagcaagacaaaatgtccgcagagaatcagggccaccgtgctacggccgaccactgc aaattgctcaaagaggaaaacgacagactaaacaccacataccgccaactgcagaaggac aacgagaacttccagctggaccacaggagcatcaagagtcagctgaatggcgccaagctg gagcagaccaggctggaggccgagttctccaagctgaaggagcagtaccaacagctggac atcacctccaccaaactcaccaatcagtgcgagctgttgagtcagctgaagggcaacctg gaggaggagaaccgacacctgctggaccagatccagacgctgatgctgcagaaccgcacg ctgctggagcagaccatggagagcaaagacctgttccacgtcgagcagagacaatatatt gacaagttgaatgaactgaggaggcagaaggagaagctggaggagaagatcatggaccag tacaagttctatgatccttcaccgccacgcaggcgcggcaactggattacgcttaaaatg aagaagttcaagaccaaaagccgcgagcgaatgcgctctctcacgctgacgccatcccgc tcagagtgcggcgacggcttcctgtccttccccgccgacagccaggacagctcttcggtc ggctccgggtccaactcgctggatgacacgctcgcgcacaagaggagcagcaggaggaga ggccaacggtgccttgttcaagggcagggctccagcaatgctttaaaaaggttgcctttc atgaggaacagatccaaggacaaagacaaggccaaggccatctaccggcgctccatgtcc atgaacgaccttctccagaccatgacggtggccggcgttccgggcgccgactgggcaggc agcacggagaacctggacggcggcgaggcgggagatgtgggcggtgggcgccgcgaaggg ggcggcggccagcgcatgaaggaactggccttctccaccaacgccatcgactgcgccacg ctcacgctgccctcctccgcccacaggagggccgcccacaggctacagatcaaagatgat gcttcctgcgaggatgtcgctggctcctcggatgatccaaagagtcaagcctccagaccc tccagtctccatagcaacaggaccaccagtagtaatagtaacaataactcccagctcacc tctcccctggaggcaaaaggcacgttcaacggcagcacaagtcgtcctcacagcgagagc agcggcgagttcagcttgagtttggagcaggaggcctggtccagcagcggcagcagtccc gtccagcaggcttcgtcgtcccgctcgtcccgccagagccccggacccacgcggcagtcc ctggaacccgccgccacgcctggtcagatcaggaaaacggcatccccgggcagcgaggtg ctttctctgcagcagttcctggacgagggaatcgaccctgccgagtcgggcagtcaggaa aacctcacagtggaatccccccgcctcaccatttcttctgaacgcgcgcagaaggagcac cccgccatccggggccgcggcatcctgcgctcctccagcggcaaagcggcgccggtcacc gccgaccgcccgccgcgctcctcgggccagccggggcgacccagcctgcgcaaggctgag agcacccgcgtgaggggctcggtccggcccaccctgtcggcccaggctcgggccacgtcg gtctcagagcgactggaccgggcgtcggcgtccacattaccccgcgccagtagcgtcatc tccacggccgagggcagctcgcggcgcaccagtatccacgacatgctgtccaaggacaac cggcagcccgtgtccgtcgacggggtccaagccccgcccgaacccagtgagtacccctca aagggaccctcctgtagcgccaacttgccaaagtccctcagcttgccgtgcccgagctcg gacgaagccgagctccccaccctcgagtccttcctgggtccctccttcaccgccgagtcg gtcttcatggactccatctttagcgagtcggcgggcaaaaacctccccttcctctccctc aaccccaccctcgtcagcaacatcagtggaccccctgtcgcgccttaccagccgagccga gaggaaggtccgccgcggtcaggggccgagcatttggacgcggaggagaacctgtggttc gaatatgggtgtgtgtga

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