Hippocampus comes (tiger tail seahorse): 109510059
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Entry
109510059 CDS
T04969
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04517
IgSF CAM signaling
hcq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109510059 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109510059 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hcq04812
]
109510059 (sptbn1)
Cytoskeleton proteins [BR:
hcq04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109510059 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
109510059 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
DUF7854
Motif
Other DBs
NCBI-GeneID:
109510059
NCBI-ProteinID:
XP_019715660
LinkDB
All DBs
Position
Unknown
AA seq
2387 aa
AA seq
DB search
MELQSASSTFSAPLSPTLDYAGPLPPSSPSGVPGPSHGRSRSPMRASSPGPGGGGGFSGQ
AAFNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYVDLRDGRMLIKLLE
VLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTI
ILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAIIH
KHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTY
YHYFSKMKALKVEGKRIGKVLDNAIETEKMVDKYECLASELLEWIEQTIIILNNRKFANS
LVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGKLISDIN
KAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFD
LQAVEAATKKHEAIETDIAAYEERVQAVVSVAKELEAESYHDIKRIAARKDNVIRLWEYL
LELLKARRLRLEQTLGMQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALV
EADIGIQADRVRNVNANAQKFANDSDGYKPCDPQVIRERVAHMEFCYQELSQLAAERRAR
LEESRRLWKFFWEMAEEEGWIREKEQILSSEDCGKDLTGALRLLSQHKAFEDEMSGRAAH
LQQTIKQGEQLVADKHFGADKIRERIQDIQDQWAALERLSAVRKSRLQEACNQHQFQADA
DDMDTWMLDALRIVSSVDVGHDEFSTQALVKKHKDVAEEIASYRPVIDALHEQSHTLPPE
KADSQEVQSRLAGIEERYKEVVELARLRKQALQDALALYKMLSEANACELWIDEKEQWLN
SMDIPDKLEDLEVVQHRFESLEPEMNNQASRVAVVNQVARQLIHSGHPGEKEIKSQQDKL
NTRWSQFRDLVDQKKESLSSALGVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMA
LQRKLTGMERDLAAIEDKLGDLAKEAERLSSEHPEQSEAIKGRLDEITGVWEEMKGTMKN
REESLGEASKLQQFLRELDDFQSWLSRTQTAIASEDMPNTLAEAEKLLGQHEAIKNEIRN
YEEDYQKMRDMGEMVTRGQTDAQYMFLRQRLQALDTGWNELHKMWENRRNLLSQSHSYQL
FLRDTKQAEAFLRTQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKISGVVDTGR
RLVADGNINTERIQDKVDSIHQRHKKNRAAASELLMRLKDNRDLQKFLQDCQELSLWINE
KMLTAQDMTYDEARNLHSKWLKHQAFMAELQSNKEWLDKIQKDGEALMAEKPETEAMVRE
KLASLKKMWEELESSTQTKAKCLFDANKAELFTQSCADLDKWLAGLDAQLQSDDYGKDLT
SVNIMLKKQQMLESQVEVRQKEVDELQSQSQALSQEGKGSDEVDGQRRSVESKFGALRAP
LQSRRDNLMASREIHQFNRDVEDEILWVEERMPLATSTDHGHNLQTVQLLIKKNQTLQKE
IQGHQPRYDDIFERSQHILRQERPTGELIRQRLAELRSLWEQIRKETEKRHARLSEAHEA
QQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADTVHQLSAT
SRGLVAAEHPDSERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWI
AEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDGVNRLADELINAGHGDAA
TVAEWKDGLNEAWADLLELIDTRTQILAASFELHKFYHDAKEILARVLDKHKKLPEELGR
DQNTVETLQRMHTAFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWK
SLLEAAEGRRGKLADTGDKFRFFSLVRDLMLWMDDVIRLIDAQENPRDVSSVELLMNNHQ
GIKAEIDARNDSFTACIELGKSLLARKHYASDEIKEKLLQLTDKRKEMIDKWEDRWEWLR
LVLEVHQFSRDAGVAEAWLLGQESYLSSREMGQSVDDVEKLIKRHEAFEKSAATWEERFA
ALERLTTMELLEVRRRQEEEERKNQPAAAEATAAAQPREGEVANQNGPSSEPDSARDDAC
AGGEAVNGVSEPSPAGSPGGARKAKAGQQAATLPARSQQEAPSATSQMEGFLHRKHEWEG
HNKKASSRSWHHVFCVLNHQELGFYKDHKSATQGIPYHGEIPVALQDATCEVALGYKKKK
HVFKLKVTDGNEYLFQAKDDEEMNSWISTISVAILGEKGEVTPSSHSTPAPAATAARAHT
MPTSTGRSVTVPTSASAEVAAAAAAESSPGKRDKDKEKRFSLFSKKK
NT seq
7164 nt
NT seq
+upstream
nt +downstream
nt
atggagctccagagcgccagcagtaccttctcggctcccctgtcccccacgttggactac
gccgggccccttcccccttcttctccttcgggggtccccggcccttcccacggccgcagc
cggagccccatgcgggcgtctagcccggggcccggcgggggcggcggcttctcgggccag
gcggccttcaactacaaccagctggaaggtcgcttcaaacagctgcaagacgagcgcgag
gcggtgcagaagaagacgttcaccaaatgggtcaactctcacctctcccgggtttcctgc
cgcatcaccgacctctatgtggaccttcgggacggacgcatgctcatcaagctgctcgag
gtcctcagcggcgagagactgcccaagcccaccaaaggccgcatgaggatccactgcctg
gagaacgtggacaaggccctgcagttcctcaaggagcagcgcgtccacctggagaatatg
ggctcgcacgacattgtggacggcaaccaccgcctcacgctaggcctcatctggaccatc
atcttgcgcttccagatccaagacatcagcgtggagacggaggacaacaaagagaagaag
tcggccaaagatgctctgctgctctggtgtcaaatgaagacggccggatatccaaacgtg
aacatccacaacttctccaccagctggagggacgggatggccttcaatgccatcatccac
aaacacagaccggacctgatcgactttgacaagctgaagaagtccaacgcgcactacaat
ctgcagaacgccttcaacctggccgagcagcacctgggcctcaccaagctgctcgacccc
gaagacatcagcgtggaccacccggatgagaagtccatcatcacctacgtggtcacctac
taccactacttctccaagatgaaggccctcaaggtggagggcaagcgcatcggcaaggtt
ctggacaacgccatcgagacggaaaagatggtggacaagtacgagtgtttggcctcggag
ctcctggagtggatcgagcagaccatcatcatcctcaacaacagaaagtttgccaactcg
ctggtgggcgtccagcagcagctgcaggccttcaacacctacaggacggtggagaagccc
ccaaagttcacggagaagggcaacctggaggttctgctgttcaccatccagagcaagatg
agggccaacaaccagaaggtgtacacgcctcgcgagggaaaactcatctcggacatcaac
aaggcgtgggagcgtctggagaaggcggagcacgagcgcgagttggcgctgaggacggag
ctgattcgacaggagaaactggagcagttggctcgccgcttcgaccgcaaggcggccatg
cgggagacctggctgagcgaaaaccagcggctggtctcgcaggacaacttcggcttcgac
ctccaggcggtggaggcggccaccaagaagcacgaggccatcgagacggacatcgccgct
tacgaggagcgcgttcaggcggtggtgtcggtggccaaggagctggaggcggagagctac
cacgacatcaagcgcatcgcggccaggaaggacaacgtgatccgcctgtgggagtacctg
ctggaactcctcaaggcgcgcaggctgaggctggagcaaacgctgggcatgcagagggtc
ttccaggagatgctctacatcatggactggatggacgagatgaagatgctgctgctgtct
caggattacggcaaacacctcctgggtgtggaggacctgctgcagaagcacgccttggtg
gaggcagacatcggcatccaggccgaccgggtccgcaacgtcaacgccaacgcgcagaag
tttgccaacgactccgacgggtacaaaccctgcgaccctcaggtcatcagggaacgcgtg
gcccacatggaattctgctaccaggaactcagccagctggcggccgagcggcgagcacgc
ctggaagagtcgcgccgcctctggaagttcttctgggaaatggccgaagaggagggctgg
atccgtgagaaggagcagatcctctcctcggaggactgcggcaaggacctgacgggcgcc
ctgcggctgctgagtcagcacaaggcctttgaggacgaaatgagcggacgcgccgcccac
ctgcagcagaccatcaagcagggagagcagctggtggccgacaagcactttggggccgac
aagatccgggaacgcatccaggacatccaggatcagtgggcggcgttggagcggctctcg
gctgtccgcaaatctcgcctgcaggaagcgtgcaaccagcaccagttccaagcggacgcg
gacgacatggacacgtggatgttggacgccctgcgcatcgtgtccagcgtggacgtgggc
cacgacgagttctccacgcaggcgctggtgaagaagcacaaggacgtggccgaggagatc
gccagctacaggcccgtcatcgacgccctgcacgagcagtcgcacacgctgccgcccgag
aaggccgactcccaggaggtgcagagccgtctggcgggcatcgaggagcgctacaaggag
gtggtggagctggcgcgtctccgcaagcaggcgctgcaggacgcgctggccttgtacaag
atgctgagcgaggccaacgcctgcgagctgtggatcgacgagaaggagcagtggctcaac
agcatggacatccccgacaagctggaggaccttgaggtggtccagcaccggtttgagagt
ttggagcctgagatgaataatcaggcatcacgggtcgccgtcgtcaaccaggtcgccagg
caactcatccacagcggccatcccggcgaaaaggaaatcaagtcccagcaggacaaactc
aacaccaggtggagtcagttccgcgacttggtggatcagaagaaggaaagtctgagctcc
gccttgggagtgcagaactaccatctggagtgtaacgagaccaagtcctggatcagggag
aagaccaaggtgatcgagtccacccaggagctgggcaacgacctggccggcgtcatggcg
ctgcagaggaagctgacgggcatggagcgagacctggccgccatcgaggacaagctcggc
gacttggccaaggaggccgagcgcttatcctcggaacacccggaacaatccgaggccatc
aaaggacgcctggacgagatcaccggcgtgtgggaggagatgaagggcaccatgaagaac
cgcgaagagtcgctgggcgaggccagcaagctgcagcagttcctgcgcgagctggacgac
ttccagtcgtggctgtcgcgcacgcagacggccatcgcgtccgaggacatgcccaacacg
ctggccgaggctgagaagctgctgggccagcacgaggccatcaagaacgagatccgcaac
tacgaggaggactaccagaagatgcgcgacatgggcgagatggtgacgcgcggccagacg
gacgcgcagtacatgttcctgcgccagcggctgcaggcgctcgacacgggctggaacgag
ctgcacaagatgtgggagaacaggcgcaacctcctctcgcagtcgcactcctaccagctc
ttcctcagagacaccaagcaggccgaggccttcctcagaacccaggagtacgtgctggcc
cacacggagatgccgaccacgctggagggcgccgaggcggccatcaagaagcaggaggac
ttcatgaccaccatggacgccaacgaggagaagatcagcggcgtggtggacacgggacgg
cggctggtcgccgacggcaacatcaacaccgagcgcatccaggacaaggtggactccata
caccaaaggcacaagaagaaccgagcggcagccagcgaactcctcatgagactgaaggac
aaccgagacctgcagaagttcctacaggactgccaggagctgagcttgtggatcaacgag
aagatgctgacggctcaggacatgacgtacgacgaggcgcgcaacctgcacagcaagtgg
ctcaagcaccaggccttcatggccgagctgcagtccaacaaggaatggctggacaagatc
cagaaggacggcgaggcgctgatggcggagaagcccgagacggaggccatggtgcgcgag
aagctggcgtcgctgaagaagatgtgggaggagctggagtccagcacgcagaccaaagcc
aagtgtctgtttgacgccaacaaggccgagctgtttacgcagagctgcgccgacctggac
aagtggctggccggcctggacgcgcagctgcagtcggacgactacggcaaagacctcacc
tccgtcaacatcatgctcaagaagcaacagatgctggagagccaagtggaggtgaggcag
aaggaggtggacgagctgcagagtcagtcgcaggcgctgagtcaggagggcaaaggctcg
gatgaggtggacggccagcgcaggagcgtggagagcaagtttggcgctctgcgggcgccg
ctccaaagtcgccgcgacaacctgatggcctcccgcgagatccaccagttcaaccgagac
gtcgaggacgagattctgtgggtggaggagaggatgcccttggccacgtccacggaccac
ggccacaacctccaaacagtgcagctccttatcaaaaagaaccagacgctccagaaggag
atccagggccaccagccgcgctatgacgacatctttgagcgcagccagcacatcctgcgg
caggagcgtcccacgggcgagctgatccgccagcgtctggcggagctgcgctcgctgtgg
gagcagatccgcaaggagacggagaagcgccacgcccgcctgagcgaggcgcacgaggcg
cagcagtactactttgacgccgccgaggccgaagcctggatgagcgagcaggaactctac
atgatgtccgaggagaaggccaaggacgagcagagttcggtggccatgttgaagaagcat
cagatcctggagcaggcggtggaggattacgcagacaccgtccaccagctgtccgccacg
agccgaggcctggtggccgccgaacaccccgacagcgagcgcatcggcatgcgtcagtcg
caggtggacaagctgtacgccggactgaaggatctgtcggaggagcggcggggcaagctg
gacgagcgcttccgcctcttccagctcaaccgggaagtggacgacttggagcagtggatc
gccgagagggaagtggtggccggctcgcacgagctcgggcaggactacgagcacgtcact
atgctgcaggagcgcttccgagagttcgcccgcgacacgggcaacatcgggcaggagcgc
gtggacggcgtcaaccgtctggcggacgagctgatcaacgcgggccacggggacgcggcc
acagtggccgagtggaaggacggcctgaacgaggcctgggccgacctgctggagctgatc
gacacgcgcacgcagatcctggccgcctccttcgagctgcacaagttctaccacgacgcc
aaggagatcctggcgcgagtgctggacaaacacaagaagttgcccgaggagctgggccgc
gaccagaacacggtggagacgctgcagaggatgcacaccgccttcgagcacgacatccaa
gcgctcggcacgcaggtgcgtcagcttcaagaggatgccgtccgtctgcagtcggcgtac
gcgggcgacaaagcggacgacatccaaaagcgggaaggagaggttctggaggcgtggaag
agccttctggaggcggccgagggccgacgagggaagctggccgacacgggagacaagttc
cgcttcttcagtctggtgcgagacctcatgctgtggatggacgacgtcatccgactcatc
gacgcgcaggagaatccccgcgacgtgtcgtcagtggagctgctgatgaacaaccaccag
ggcatcaaggccgagatcgacgcgcgcaacgacagcttcaccgcctgcatcgagctggga
aagtctctcctggccaggaagcactacgcctccgacgagatcaaagaaaagttgctgcag
ttgacggacaagcggaaagagatgattgacaagtgggaagaccggtgggagtggctccga
ctggtgctggaggtgcaccagttctcgcgggacgcgggcgtggccgaggcctggctcctg
ggccaggagtcgtacttgtccagccgcgagatgggacaaagcgtggacgacgtggagaaa
ctcatcaagaggcacgaggccttcgagaagtcggccgccacctgggaggagcgctttgcc
gccctggaaagattgaccacgatggagttgctggaagtgagaagaaggcaagaggaggaa
gagaggaagaaccagccggcagccgcggaagcgacggccgccgcgcaaccaagggaaggc
gaggtggcgaatcagaacgggccgagcagcgagccggactccgccagggatgacgcttgc
gccggcggcgaggcggtcaacggcgtgtcggagccaagcccagcggggtccccggggggc
gcccgcaaagccaaagccggccagcaggcggccacgctgcccgccaggagccagcaggag
gcgccctcggccacttcgcagatggagggcttcctgcaccgcaagcacgagtgggagggc
cacaacaagaaggcgtccagcaggtcgtggcaccacgtcttctgcgtgctcaaccatcag
gagctgggcttctacaaggaccacaagagcgccacgcagggcatcccgtaccacggcgag
atccccgtcgcgctacaagacgccacctgcgaagtggcgctcggatacaagaagaagaaa
cacgtcttcaaactcaaagtcactgacggcaacgagtatctctttcaagccaaagatgac
gaggagatgaactcatggatctccaccatctcggtggccattttgggcgagaagggcgag
gtgacgccgagtagccacagcacgccggcgcccgctgccaccgccgcccgcgcccacacc
atgccgacctcaactggtcgctcggtcaccgtgcctacttcggcttcggccgaggtggcg
gcggcggcggcggccgagtccagtccaggcaaacgcgacaaagacaaggagaaacgcttc
agtctcttcagcaagaagaaataa
DBGET
integrated database retrieval system
