KEGG   Hippocampus comes (tiger tail seahorse): 109510280
Entry
109510280         CDS       T04969                                 
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
  KO
K14961  COMPASS component SWD1
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hcq03036]
    109510280 (rbbp5)
Chromosome and associated proteins [BR:hcq03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     109510280 (rbbp5)
    COMPASS/SET1 complex (yeast)
     109510280 (rbbp5)
    MLL-HCF complex
     109510280 (rbbp5)
    MLL3/MLL4 complex
     109510280 (rbbp5)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR55 Beta-prop_IFT140_1st ANAPC4_WD40 EIF3I Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_RIG_2nd ASA1 Beta-prop_NOL10_N Beta-prop_LRRK2 WDR54 Beta-prop_WDR11_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_NUP159_NUP214 PAC11 Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 109510280
NCBI-ProteinID: XP_019716031
UniProt: A0A3Q2Y0Q8
LinkDB
Position
Unknown
AA seq 558 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQCHPRDM
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
DTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTTVDPIVAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DSTPQAGAAEEMQAGGDKKQRPPSSDGAPAKKKARTTNIELQGVPVDEVHPLLGVKGDGK
SKKKAAGRPKGSKGKDKDFPFRPKPYRGGERPSFAMDVLGSSGPGGGGGGMKGRAEGGLA
TGTLVTQTYKQHDIGGMD
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgaatctcgaactcctggaatcttttgggcagaactatcctgaggaggcagatggaacg
ctggactgcatcagcatggccctcacctgcaccttcaaccgctgggggaccctactggcg
gtgggctgcaacgacggacgtattgtcatctgggacttcctgacacgcggcattgccaaa
atcatcagtgcacacatacaccccgtctgctccttatgttggagtcgagacggccacaag
ctggtgagcgcgtccacagacaacatcgtgtcacagtgggatgtgctgacgggcgactgt
gaccaacgcttccgcttcccctcgcccatcctcaagctacagtgccaccccagagacatg
gacaaagtgctggtgtgtcccatgaagtcggcgccggtgctgctcaccctgtccgactcc
aaacacgtggtcctgcccgtggacgatgactcggacctcaacgtggtggcggcctttgac
aggcggggcgagtacatctacaccggcaatgccaaaggaaagattctggtgttgaacaca
gacactcaggacctggtggcgtcgttccgagtcaccactggcaccagcaacaccaccgcc
attaaatccatcgaatttgcacgcaaaggcagttgcttcctcatcaacacagcggaccgc
atcatccgggtttacgacggcagggagattctgacgtgcggccgtgacggcgagccagaa
cccatgcagaagctccaagacctggtcaacaggactccatggaagcgctgctgcttctcc
ggggacggcgagtacatcgttgctggctcggcccggcaacacgccctctacatctgggag
aagagcatcggcaacctggtgaagatcctgcacggcacgcgaggcgaactgttgctggac
gtggcctggcatcccgtgcgccccatcatcgcctccatctcaagcggagtggtgtccatc
tgggcccaaaaccaagtggaaaattggagcgcttttgctcccgacttcaaagagctggat
gagaacgtcgagtacgaggagcgagaatctgagtttgatattgaggacgaggacaagagt
gaacccgagcagacaggtgcggacgcggccgaggacgaggaggtggacgtcaccacggtg
gaccccatcgtggctttttgcagcagcgatgaggagctggaagattacaaggctctgttg
taccttcccatcgcccccgaggtggaggaccctgaggagaaccccttcggccctccaccg
gactccacgcctcaggccggggccgccgaggaaatgcaggcgggcggcgacaagaaacag
cggccgccgtcctccgacggagccccggccaagaagaaggcacgcactaccaacatcgaa
ctccagggggtgccagttgatgaggtgcatcccctgctgggcgtgaagggcgatggcaag
tcgaagaagaaggcagcgggccggcccaaaggctccaaaggtaaagacaaagacttcccc
ttcagacccaagccctacagggggggcgagcggccgtccttcgccatggacgtcctgggc
agctcgggcccgggaggaggaggaggagggatgaagggcagggcagaggggggcctggcc
acagggacgctggtgacgcagacgtacaagcagcacgacataggaggaatggactga

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