KEGG   Hippocampus comes (tiger tail seahorse): 109511266
Entry
109511266         CDS       T04969                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein 1, mitochondrial-like
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hcq03016]
    109511266
   03029 Mitochondrial biogenesis [BR:hcq03029]
    109511266
Transfer RNA biogenesis [BR:hcq03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    109511266
Mitochondrial biogenesis [BR:hcq03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    109511266
SSDB
Motif
Pfam: PPR_2 PPR_3 PPR_long PPR PPR_1 TPR_24 Flu_PB2_6th
Other DBs
NCBI-GeneID: 109511266
NCBI-ProteinID: XP_019717767
LinkDB
Position
Unknown
AA seq 666 aa
MLPSLATLCCRNGATMSFMGAKLSRLSAVTKRAARRYGAPPSPAVRLFLTPGGVHVRRIS
LSDSAWRQDAEFASPSDEDFGTLSAEISGRRSFRKVSPEMLDLSYQQDDDDQKPEETSRR
PGRRNTTYWYFLQCKKLIKAGKLEEALEMFEKDMLRGERLQPEEYNYSVLIGGCGRAGHL
NKAFKLYNDLKKRGLEASDATYTALFNACAESPHRRAALEKALKLEREVRRKNLTLGSAT
YHAVLKWHALSGNLHACMHTLREMLDVGRAVTQETFHYLLMGCLNDKELGFRLALQVWRQ
MLKSGLAPDSKNYNLLLRTARDCRIGDPGLASGILLQSNESHNKSGKRVDVDLLERQLLG
QTDVPSGGGETQNPLVPLTPAESALLPIDSTPNLLDLLEGKGGGGLISFGAVEGASDRLA
VLGGGRGFLEKMAAGGLEPDLQTLTLLADTMAPGLQSLETLLEAAKRHHIKLDAAFFNSA
IRRAARSGDLDAAKAVLSVMRQRHVTVDVQTFGSLALGCQRQKEGLQLLTDMEEAGLQPN
THVYSALIGRASRRLDYAYLKTLLKSMRDKGVWPNQVIIKQLEFAAQYPPNFDKYKSRNN
YLLQIDGFRGYYEQWLQSMPAQGEQDGQSALSAAFVKTQAEMIEGRKKQRAAARITLSSR
KQTTRP
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgctcccgtccttagcaactttgtgctgccgaaatggggcaaccatgtcattcatgggt
gctaaattgtcccgtctatcagcggtcaccaagcgagctgctcgccgctatggagcgcca
ccatcacccgcggtgaggctcttcctcactcccggcggtgtgcacgtcagacggatctcc
ctgtcagattccgcgtggcggcaggacgcggagttcgcctcgccgtctgatgaagacttc
ggcaccctttccgccgaaatttccggccggaggtcgtttcgtaaagttagcccggagatg
ttggacctgagctaccaacaagacgacgacgaccagaagccggaggaaacttcacgcagg
cccggcaggagaaataccacctattggtacttcttacaatgcaagaagctgattaaagct
gggaagcttgaggaggccttggagatgtttgagaaagacatgctgcgcggagagcggctg
cagccggaggagtacaactacagcgtgctcataggaggctgcgggcgagccggacacctc
aacaaggccttcaagctctacaacgacctgaagaagcgaggtctagaggcgtcggacgcc
acctacacggctctgttcaacgcctgcgcagagtcgccgcacagacgcgcggctctggag
aaggcgctcaagctggaacgggaagtgagacgcaagaacctcactctcggctcggccacc
taccacgccgtcctcaagtggcatgcgctcagcggcaacctgcacgcctgcatgcacacg
ctcagggaaatgctggatgtcggtcgcgccgttactcaggagacgtttcactacttgctg
atgggatgtctgaacgacaaagagctcggattcaggctggctttgcaggtgtggcggcag
atgctcaagtccggcctcgctcccgactccaagaactacaacctgctcttgaggaccgca
agggattgccggattggtgaccccggactggcctccggcatcctgctccagtcaaacgag
tcccacaacaagtcaggcaaacgagtggacgttgatcttctggagcgtcaactgctcggc
caaaccgacgtcccaagtgggggtggcgagacgcaaaaccccttggtgccgctcacaccg
gcagaatctgcactcctgcccattgactccaccccaaacctgctggacttgctggaggga
aagggcggcggtggcctgatctcctttggagctgtggaaggagcgtctgacagactagct
gtgctgggcgggggccgaggtttcctggagaagatggcggcgggcgggttggagcccgac
ctgcagactctgacgctgctggcggacaccatggcgcccggtcttcagtctttggagacg
ctattggaggcggccaaacggcaccacatcaagttggacgccgcctttttcaactcggcc
attcgcagggctgccagaagtggggacctggatgcagccaaggccgtgttgagtgtgatg
cgacagcgccacgtgaccgtggatgtgcagacgtttgggagcctggcgctgggatgccag
agacaaaaggaaggactccaactactcaccgacatggaagaggcggggttacaacccaac
acgcatgtgtactctgccctgattggccgagcaagtcgccgtctggattacgcttacctc
aaaacgctgttgaaaagcatgcgtgacaagggggtgtggcctaaccaagtcatcatcaaa
cagctggagtttgctgctcagtatccccccaactttgacaagtacaagtcccgcaacaac
tacctgctccaaattgacggcttccgcggttactacgagcagtggttgcaaagcatgccg
gctcagggcgagcaggacgggcagtcggcattgagcgccgcctttgtcaaaactcaagcc
gagatgattgagggccggaagaagcaaagagcggcggcgaggatcacactgagcagcagg
aaacaaacgacgagaccttag

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