Hippocampus comes (tiger tail seahorse): 109511342
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Entry
109511342 CDS
T04969
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109511342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109511342
03036 Chromosome and associated proteins [BR:
hcq03036
]
109511342
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109511342
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109511342
Chromatin remodeling factors
BAF complex
109511342
PBAF complex
109511342
GBAF(ncBAF) complex
109511342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
109511342
NCBI-ProteinID:
XP_019717938
LinkDB
All DBs
Position
Unknown
AA seq
1657 aa
AA seq
DB search
MSTPDPPLGGNPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSSGLSQPGPS
GYNQDTMHPLHKSMEGMHDKSMNEESRFSQMKALSVRPGGHTGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVPSNGPPSGPLLPSSSSSSSSIGAPPASTPLEGPGSDQHSLGPGSRSGPL
GASGPGPSPGPSLSATVPTLMSGLESGGLSGPGGPTPFNQSQLHQLRAQIMAYKMLARGQ
PLPDHLQMAVQGKRPMPGMQQPMSSLTTGAAPPGPMSSGYSRAHGMMGPNMPPPGPSGPA
VGMQGQNHNGPPKSWPEGPLVNAAAPSSAPQKLIPPQPTGRPSPAPPSVPPAASPIMPPQ
TQSPGQPAQPPPMMPYHSKQSRITPIQKPCGLDPVEILQEREYRLQARITHRIAELENLP
GSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALDSKAYKRSKRQSLRE
ARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKIQKLTKAVGTYHA
NTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVR
AHKAAQALKEKKKKKKKKKKKLESPEGQTPALGPDGEPLDETSQMSDLPVKVIHVDSGNI
LTGVDAPKAGQLETWLEMNPGYEVAPRSDSEDSEDEEEEEEEEEEHQPSTAPTEEKKKIS
DPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYYAVAHAVTEKVEKQSTLLING
QLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPL
STLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKQVLAK
IRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTI
FKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKV
EYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMF
QQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATNHKVLLFCQMTSLMTIM
EDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNDAESEYFIFLLSTRAGGLGLNLQSADTVI
IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG
MFDQKSSSHERRAFLQAILEHEEQDEVWGQDVCLRINEEDEVPDDETVNQMIARSEEEFD
QFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEEEKMFGRGSRQR
KEVDYSDSLTEKQWLKQAIEEGTLEEVEEEVRTKKTTRKRKRDRDLDLPVPSCSSGGRGR
GDKDDDAKRQRKRGRPPVEKISPNPPALTKKMKKIIDAVIRYKDGTSGRQLSEVFIQLPS
RKELPEYYELIRRPVDFRKIKERIRGHRYRSLGDLERDVMLLFQNAQTFNLEGSLIYEDS
IVLQSVFTSLRQKIEKEEESEGEESDEEEDEQDDGSESESRSVKVKIRLGKKERGGDRGK
GRSRRSGRTRAKPVVSDDDSDEEQEEEHSLSATDEES
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccagaccccccactgggaggcaacccccgtccgggtccatcccccggtcca
ggtccctcccctggggcaatgctgggccccagcccgggtccttccccaggctctgctcac
agcatgatgggacccagtcccggtccaccttcctctggactctcccagccaggcccttct
ggctacaaccaggacaccatgcaccccctgcacaaatccatggagggcatgcatgacaag
agcatgaacgaggagagtcgcttcagtcaaatgaaagcgctgtcagtgagaccgggcggg
cacaccggtatgggtcccccacccagtcccttggaccaacattcacaaggttatcactct
ccattaggtggttccgatcattctagtccggtaccatccaatggtcctccatctggacct
ctacttccatcctcctcctcatcttcctcctccatcggcgctccccccgcctccacgcct
ttggaaggccccggtagcgaccagcactccctgggcccaggcagccgctcaggaccactc
ggcgcttcagggccaggacccagtcccgggccgagcttaagcgccactgtccccaccctt
atgtcaggccttgaatccggtggtctttctggacctgggggccccaccccttttaaccag
agccagctgcaccaactcagagctcagatcatggcctataagatgcttgcccgaggtcag
cccctgccggaccacctgcagatggctgtgcaagggaaaagaccgatgcctggcatgcaa
cagcccatgtcgagcttgactacaggagccgcgccaccaggaccaatgagttcaggctac
agtcgcgctcacggaatgatgggccccaatatgcctccaccaggtccatcaggtccggca
gtcggaatgcaaggacagaaccacaatggacctcccaagtcctggcctgaaggcccgttg
gtgaatgcagcagcaccgtccagcgctccccaaaagctaattccgcctcagcccacggga
cgaccctcacccgctcccccttcggtgccccccgcggcctcccccatcatgcctccgcag
acgcagtcccccgggcagccggcgcagcctcctcccatgatgccttaccacagcaagcag
agccgaatcacccccatccagaagccctgcggcctggaccccgtggagatcctgcaggag
agggagtacaggttgcaggctcgcatcacacatcgtattgctgagttggagaatttgccg
ggctctctggctggagatttacgaaccaaagctaccattgaactcaaagcgctacgactg
cttaacttccagagacagctacgacaggaggtggtggtgtgcatgcgccgtgacacggct
ctggaaacggcgctggattccaaggcctacaaacgcagcaaacgccaaagcctgagagag
gctcgcatcacagagaaactggagaaacagcagaagatcgaacaagagcgcaagcgcagg
cagaagcatcaggagtatctcaacagtatccttcaacatgccaaagacttcaaggagtat
catcgttccatcacgggcaaaatccaaaagttgaccaaagctgtgggtacctatcacgcc
aacaccgagagggagcagaaaaaagagaacgagcgcattgagaaagagcgaatgaggaga
ctcatggctgaagacgaggagggctaccgtaaactgatcgaccagaagaaggacaagcgt
ctggcctaccttctgcagcagacggacgaatatgtggccaacctcaccgagctggtccgt
gctcacaaggctgcgcaggccctcaaagagaagaagaagaagaagaaaaagaagaagaag
aagttggagagtccagagggacagactccagctttggggcctgatggagagcctctggat
gagaccagtcagatgagtgaccttcctgtgaaggtcatccacgtggacagtggcaacatc
ttgaccggggtggacgctccgaaggcggggcagttggagacgtggctggagatgaacccc
ggttatgaagtagcaccacgctctgatagtgaagacagcgaggacgaagaggaggaagaa
gaggaggaggaggagcaccagccttcaactgcaccaacagaagaaaagaagaagataagc
gaccctgacagcgaggacgtgtcagaggtggacgtgcgacacatcatcgagaatgctaaa
caggatgtggatgatgagtacagtggagcagcctttgcgcgaggacttcagtcttactac
gccgtggctcatgcggtcacagagaaggtggaaaagcaatccactttattgataaacgga
cagcttaaacagtatcagatcaaaggtctcgagtggctggtgtcgctgtacaacaacaac
ctgaatggcatcctggctgatgaaatgggcctgggcaaaaccatccagacaatagcgctc
atcacgtacctcatggagcacaagcggctcaacggaccctacctcatcatcgtgcccctc
tcgactctttcaaactgggtgtacgagtttgacaagtgggcacctacagttgtgaaagta
tcctataagggttctccggctgcccgaagagcttttgtccctcagttgcgtagcggcaaa
tttaatgttctcctcaccacctacgagtacatcattaaggacaagcaagtcctggctaag
atccgttggaaatatatgatcgtggacgaaggccaccgaatgaagaaccaccactgtaag
ctgacccaggtgctgaacactcactacctggcgccgaggcgggtgctgctgaccggcaca
ccgctgcaaaacaagctccccgaactgtgggcgttgctcaatttcctcctgcccaccatc
ttcaagagctgcagtacctttgagcagtggttcaatgccccttttgcgatgaccggagag
aaagtggatctcaatgaagaggagaccatcttgatcatccgtcgtcttcacaaagtgctc
cgccccttcttgctgcgcaggttgaagaaggaagtggaggcacagcttccagagaaggtg
gagtacgtgatcaagtgtgacatgtcgtccctccagcgagtgctctacagacacatgcag
gccaagggcgttctgctgaccgatggctctgagaaagacaagaagggcaaaggaggcacc
aagacactgatgaacaccatcatgcagttgaggaagatctgtaaccatccatatatgttt
caacagattgaggaatctttctctgaacatttgggtttctctgggggaatagtccaaggc
cccgacttgtatcgagcctcaggaaaattcgaggtgttggatcggatcctcccgaaactg
cgagcgacaaaccataaagtgctgctcttctgtcagatgacctcactcatgaccatcatg
gaggactactttgcctaccgcagcttcaagtatctgcgtctggatggcaccacaaaggcc
gaagacagaggaatgttgctgaagacctttaatgacgccgagtccgaatatttcatcttc
ctcctgagcactcgagcaggaggcctcggcctcaacctgcagtccgccgacacagtcatc
atctttgactcggactggaacccgcaccaggacctgcaggcccaggacagagcccaccgc
ataggccaacaaaacgaggtgcgcgtgctgcgcctgtgcacagtcaacagcgtggaggag
aagattttggccgccgccaaatacaaactgaacgtcgaccaaaaggtgatccaggccggc
atgttcgatcagaagtcatccagccacgagcgcagggccttcctgcaggccatcctagag
cacgaggagcaagacgaggtctggggacaagacgtgtgcctacggatcaatgaggaggac
gaggtccctgacgacgagacggtcaaccagatgatcgccaggagcgaggaggagtttgat
caattcatgaggatggacctggaccgccggcgcgaagaggcccgcaacccgcgtcgcaag
cctcgcctgatggaggaggacgagctgccgacctggatcatgaaggacgacgccgaggtg
gagcggctcacctgcgaggaggaggaggagaaaatgttcgggcgaggctctcgtcagcgg
aaagaggtggactacagcgattcgctaaccgagaagcagtggctcaagcaggccatcgaa
gagggcaccctggaggaggttgaggaggaggtgcgtaccaagaagaccactcggaagagg
aagcgggatagggacctggacctccctgtgccctcgtgctcctcgggaggaagaggacga
ggagacaaagatgacgatgccaaaaggcagcgaaaaagggggagaccacctgttgagaag
atatcccccaatcctcccgccctgaccaagaagatgaagaagatcatcgatgccgtcatt
agatacaaagacggcacgagtggacgtcagctcagcgaggtgttcatccagctgccgtct
cgcaaagagctgcctgaatactacgagctgatccgcaggccagtggacttccggaagatc
aaggagaggattcgaggtcatcgctaccgcagtctgggcgacctggagagagatgtcatg
ctgcttttccagaacgctcaaaccttcaacctggaaggatccctgatatacgaggattcc
atcgtgctgcagtcggtcttcaccagtctgaggcagaagatcgagaaggaggaggagagc
gagggcgaggagagcgacgaagaggaggatgagcaggacgacggatctgagtcggaatcc
cgttccgtcaaggtcaagatccgtctgggcaagaaggagcgaggcggagatcgaggaaag
ggacgcagcagacgatcgggacgcactagagccaaacctgtcgttagtgacgatgactct
gatgaagaacaagaggaggagcactccctcagtgcaactgatgaagaatcctga
DBGET
integrated database retrieval system
