Hippocampus comes (tiger tail seahorse): 109511343
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Entry
109511343 CDS
T04969
Symbol
atg4d
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04136
Autophagy - other
hcq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109511343 (atg4d)
04136 Autophagy - other
109511343 (atg4d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hcq01002
]
109511343 (atg4d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109511343 (atg4d)
03029 Mitochondrial biogenesis [BR:
hcq03029
]
109511343 (atg4d)
Peptidases and inhibitors [BR:
hcq01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
109511343 (atg4d)
Membrane trafficking [BR:
hcq04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
109511343 (atg4d)
Mitochondrial biogenesis [BR:
hcq03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109511343 (atg4d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
109511343
NCBI-ProteinID:
XP_019717940
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MNSVSPNAVQYTGGVMHSELVDGRRPQAPAQKGSFGLRPPQSPDPSKEAGGEPEEMDKLK
AKLMSAWNNVKYGWTVKSKTSFNKISPVTVLGHSYLLNSEDQVERFRLAFVSRLWLTYRR
EFPQLEGSSWTTDCGWGCMLRSGQMLLAQGLLVHLMPRDWTWPDAQQLTDVDFEALRIRS
PVRVGGVPIPSFGSPRGSGTPEKTPPSDLTPNRSEKKRFECPQNRQAEPVHQKLLTWFGD
QPPTPFGVHQLVAIGKSSGKKAGDWYGPSIVAHILRKAVAHTSVLPNLAVYVAQDCTVYK
EDVARLCDPPLSQTPPESDSHAWKSVIILVPVRLGGEALNPSYIECVKNILKLECCIGII
GGKPKHSLYFVGFQDEQLLYLDPHYCQPVVDVTQVNFPLESFHCSSPKKMPFTRMDPSCT
IGFYARNKKDFESLCSAVTLALSSSTEKYPIFTFVEGQSHDYGLEAHSSNHTSPAPHILP
PGNPTRVNHRQNSDEFVFL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgtttcccccaacgcggtgcagtacacgggcggggtgatgcacagcgagctg
gtggatggccggaggccacaagccccggcgcagaaaggcagcttcggactcagaccaccc
cagagtccagatcccagcaaagaagcaggtggagagcctgaggagatggataaactcaaa
gccaaattaatgtcagcgtggaacaacgtcaaatatggctggactgtgaaatcaaagacc
tctttcaataagatctcaccagtcactgtcctgggacactcctatttgctcaacagcgaa
gaccaagtggagcgcttccgtctggcttttgtgtccaggctgtggctgacctacagaagg
gagttcccccagttggagggctccagctggaccactgactgtggctggggctgcatgctg
cgcagtggtcagatgctgctcgctcagggcctgctggtccatctgatgcctcgagattgg
acttggccagatgctcagcagttaacagacgtggactttgaagcgttgcgaatacgctca
ccggtgcgtgtcggtggggtgcccatcccctctttcggctctccacgagggtccggcacc
cctgagaagacgccgccaagcgatttgacgccgaatcgtagcgagaagaaaaggtttgaa
tgtcctcagaatcgacaagccgagcccgtccaccaaaaattgctcacctggttcggagat
caaccgccaacaccttttggggtgcaccagctagtggcaatagggaagagttctggaaag
aaggccggggactggtacggcccgtccatcgtggcacacatactgcggaaagccgtagct
catactagtgttcttcccaacctggccgtgtatgtcgctcaggattgtacagtgtacaag
gaggacgtagcacgtctgtgtgacccgccactcagccaaacccccccagaatcagacagc
cacgcctggaagtcagtcatcattctggtgcctgtccgcctgggcggggaggccctcaac
ccatcttacattgaatgtgtcaagaacatccttaagctggaatgttgtattggaatcatc
ggaggcaaaccaaagcactcgctctactttgttggcttccaagatgagcagctgctatat
ttggaccctcactactgccaacctgttgtggacgtcactcaagtcaactttccactcgag
tccttccactgtagttctcccaaaaagatgcccttcactcgaatggatcccagctgcacc
atcggcttttacgccaggaacaagaaagactttgagtctttgtgttctgctgtcactttg
gccctgtcgtcatccacggagaagtacccgatattcaccttcgtggagggccagagtcac
gattatggactggaggcgcacagcagtaaccacacgagcccggcgccacatatcctgccc
cctggcaatcccacccgggttaatcacagacaaaacagtgacgagtttgtcttcctgtga
DBGET
integrated database retrieval system