KEGG   Hippocampus comes (tiger tail seahorse): 109511343
Entry
109511343         CDS       T04969                                 
Symbol
atg4d
Name
(RefSeq) cysteine protease ATG4D
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq04136  Autophagy - other
hcq04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109511343 (atg4d)
   04136 Autophagy - other
    109511343 (atg4d)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:hcq01002]
    109511343 (atg4d)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hcq04131]
    109511343 (atg4d)
   03029 Mitochondrial biogenesis [BR:hcq03029]
    109511343 (atg4d)
Peptidases and inhibitors [BR:hcq01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   109511343 (atg4d)
Membrane trafficking [BR:hcq04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    109511343 (atg4d)
Mitochondrial biogenesis [BR:hcq03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    109511343 (atg4d)
SSDB
Motif
Pfam: Peptidase_C54
Other DBs
NCBI-GeneID: 109511343
NCBI-ProteinID: XP_019717940
LinkDB
Position
Unknown
AA seq 499 aa
MNSVSPNAVQYTGGVMHSELVDGRRPQAPAQKGSFGLRPPQSPDPSKEAGGEPEEMDKLK
AKLMSAWNNVKYGWTVKSKTSFNKISPVTVLGHSYLLNSEDQVERFRLAFVSRLWLTYRR
EFPQLEGSSWTTDCGWGCMLRSGQMLLAQGLLVHLMPRDWTWPDAQQLTDVDFEALRIRS
PVRVGGVPIPSFGSPRGSGTPEKTPPSDLTPNRSEKKRFECPQNRQAEPVHQKLLTWFGD
QPPTPFGVHQLVAIGKSSGKKAGDWYGPSIVAHILRKAVAHTSVLPNLAVYVAQDCTVYK
EDVARLCDPPLSQTPPESDSHAWKSVIILVPVRLGGEALNPSYIECVKNILKLECCIGII
GGKPKHSLYFVGFQDEQLLYLDPHYCQPVVDVTQVNFPLESFHCSSPKKMPFTRMDPSCT
IGFYARNKKDFESLCSAVTLALSSSTEKYPIFTFVEGQSHDYGLEAHSSNHTSPAPHILP
PGNPTRVNHRQNSDEFVFL
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgaattctgtttcccccaacgcggtgcagtacacgggcggggtgatgcacagcgagctg
gtggatggccggaggccacaagccccggcgcagaaaggcagcttcggactcagaccaccc
cagagtccagatcccagcaaagaagcaggtggagagcctgaggagatggataaactcaaa
gccaaattaatgtcagcgtggaacaacgtcaaatatggctggactgtgaaatcaaagacc
tctttcaataagatctcaccagtcactgtcctgggacactcctatttgctcaacagcgaa
gaccaagtggagcgcttccgtctggcttttgtgtccaggctgtggctgacctacagaagg
gagttcccccagttggagggctccagctggaccactgactgtggctggggctgcatgctg
cgcagtggtcagatgctgctcgctcagggcctgctggtccatctgatgcctcgagattgg
acttggccagatgctcagcagttaacagacgtggactttgaagcgttgcgaatacgctca
ccggtgcgtgtcggtggggtgcccatcccctctttcggctctccacgagggtccggcacc
cctgagaagacgccgccaagcgatttgacgccgaatcgtagcgagaagaaaaggtttgaa
tgtcctcagaatcgacaagccgagcccgtccaccaaaaattgctcacctggttcggagat
caaccgccaacaccttttggggtgcaccagctagtggcaatagggaagagttctggaaag
aaggccggggactggtacggcccgtccatcgtggcacacatactgcggaaagccgtagct
catactagtgttcttcccaacctggccgtgtatgtcgctcaggattgtacagtgtacaag
gaggacgtagcacgtctgtgtgacccgccactcagccaaacccccccagaatcagacagc
cacgcctggaagtcagtcatcattctggtgcctgtccgcctgggcggggaggccctcaac
ccatcttacattgaatgtgtcaagaacatccttaagctggaatgttgtattggaatcatc
ggaggcaaaccaaagcactcgctctactttgttggcttccaagatgagcagctgctatat
ttggaccctcactactgccaacctgttgtggacgtcactcaagtcaactttccactcgag
tccttccactgtagttctcccaaaaagatgcccttcactcgaatggatcccagctgcacc
atcggcttttacgccaggaacaagaaagactttgagtctttgtgttctgctgtcactttg
gccctgtcgtcatccacggagaagtacccgatattcaccttcgtggagggccagagtcac
gattatggactggaggcgcacagcagtaaccacacgagcccggcgccacatatcctgccc
cctggcaatcccacccgggttaatcacagacaaaacagtgacgagtttgtcttcctgtga

DBGET integrated database retrieval system