Hippocampus comes (tiger tail seahorse): 109511775
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Entry
109511775 CDS
T04969
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcq03037
]
109511775 (nphp4)
Cilium and associated proteins [BR:
hcq03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
109511775 (nphp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2155
Motif
Other DBs
NCBI-GeneID:
109511775
NCBI-ProteinID:
XP_019718631
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MVKTEDLSSMADSWRDVFEKGRLIPPSGQMVRQAVDGHLTSSRGVQLTLCRVTAAHLPKA
TPDAEPDATYQLRVTFFDRNHQYFFGRTWKSSPQKMKNNKMTLNEILYFHTSLRLPSNVL
VLELVALSARSDGSQQAVGQGFTVLDLFLNKTEPQGDRRLNLLHGSPRVLLHPLLKDVVD
YGDHLKAIDETHLECVLKGHPALASMMHLLPENVLVSGNETIPGLAASPTGDALLKPLLL
KMLPFTLSRLTICLQPSLEAFDSQLLQLINADCQNTQQPSQESSLKTVVIQERRLHVGVH
NGWCFIDTPQIMVLEPLSGVKGRVDSSASSSGPQTLGLRSNLELRLINHQAIAVIFQLEY
VFSAPIGRETMLSATSASRAAFLQCLRWAMLCPFQEQTNWKGEETQLVLQGDSKPNPLSV
MVYNSAVTQSAAPISTSDTIQDVIKFRLSPSSDRTTSSPKTSLRTKLDDASRKGRSSASP
TQSQNDIQAVPSPESPRGPKLSLSQLTATSRSPTVSHSSPGLPWQQSLPSLLQPSPTTPA
RWPSHVARSPSPSVHRHAQNTHTEACSALSSTTHLEMDLQPVRDGTHSAKHEEDQLRELP
FTLVHAPVITAGVTAPSLSTVSSRSSLAHLYSAGFPDIVDSKGQVAEVLDPTEPVPFEPH
REEMDPLQENLLVFQFLAFTRMPMVGIGPKWPANIYFTFQFYRFPPVTSQQLRLQNSDKV
QQKTSELLPCVLTSINNDGSVNSDSPGLQVQFRVDDRFLKPGEKQWFLRYLALHTMHVDV
WDSDSLLLIGSTAIELKHMLRHGKMAVQALHEVEVLTTDHMGEESLQMGDASNNAMAVNT
VVRGRLHVRTGNIGSQADLSRRRTVDRMQSHSYIIIPREVTGSFAGGSLSTRNILQFNAK
NTAQAQRLQVQEKHGLAYSARLNNATILSGGKNKPDSGHRKLECMAAVHQKEACQTTRVT
DGANEVPLTKELSRAPFFQDLNKAEGISNMLCHAITTPHQLFASLGSAEYMEFALKNPFN
TPQTVTIHSNDPELSVITNTKEWQYFKELTKTPTSLEEDMFHVEEGAPGPKVYLRPKETV
HIPLKYQSFLCDHNMTPQGPSFLPPSKSSNAAKKIPSNIVAAKTVKVSFKAENGDPIAIC
QVIVEPSPHIVDQTFRLYHPQLSFLKKAIRLPPWHTLSAVGGTDAETHISVRCSDPNVIC
QTRMMVPGEPQDVYLKVPGGPSPNIKMFFVMVFTDKWMAAPSQIWQVYVHFVERVDVSCV
TGQRSCQSLVLRGRQAARKVKCFSSHPQEIEVNPGGVFLLPPAGVQELQLKVQPWRAGSR
FLYVNAVDVDQRQLVTAWLLCLNVNRPVLSKAFEVCVPVSSGRGSSKKITYTNPYTSGRT
FLLHSDHPDLLQFKEDKFQLDGGESYTIGLRFAPSQSAGSVEILVYVNNLEEKTEETFCV
KVNYS
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaacagaggacctatcgtctatggcggacagttggagagacgtgtttgagaag
ggacgtttgattcccccgtccgggcagatggtgcgccaggctgtggacggccacctgact
tcatcccgcggcgtccaactcaccctctgtcgggtcacagcggcgcatctccccaaggcg
accccagacgctgaaccagatgccacctaccagctgcgagtgacattctttgacagaaat
caccagtatttctttgggagaacatggaagagcagcccgcagaagatgaaaaacaacaag
atgaccctcaatgagatcctgtacttccatacatctctgcggttgcccagcaacgtgttg
gttttggagctggtggcattgtcagcaaggtcagatggttcgcaacaggccgtgggtcaa
ggcttcaccgttttggatcttttcctcaacaagacagagcctcaaggggacagaagactg
aatctacttcatgggtcaccaagagttcttctgcacccactgctgaaggatgtcgttgac
tacggcgatcacctgaaagctattgacgaaacacatttggaatgtgtgctcaaaggacac
cctgcactggcttccatgatgcacctccttccagagaatgtcctcgtgtcaggcaatgaa
accattcctggtcttgcagcttctccgacaggggatgcacttttgaaacctctgctgctc
aagatgctgcccttcacattgagcagactgacaatctgcctccagccgtccctcgaggcc
ttcgacagtcagctgctgcagctcatcaatgccgactgccagaacacgcaacagccaagc
caagagagctccctgaagacggttgtcatccaggaaagaaggcttcatgtaggggtccac
aatggctggtgtttcattgatacaccgcagataatggtgctcgagcccctatcaggggtc
aaagggcgagtggacagctcagcgtcatcatcgggaccccagactctaggcctccgcagc
aacttggagctcaggctgatcaatcaccaagccatagcggttatcttccagctggagtac
gtcttctctgctccaattggccgagagacaatgctgtctgccacatcagcatcccgggca
gccttcctgcagtgcctccgttgggcaatgttgtgcccattccaggagcagacaaactgg
aagggggaagagacgcagctggttctgcaaggggattcaaagccaaaccctctcagtgtc
atggtctacaactcagccgtaactcagagcgccgcgccaatctccacctctgacacaatt
caggatgtgatcaaatttcggctgtcccccagttcggacagaacgacatcaagtccaaag
acatctctgagaacaaagctggacgatgcatcacgaaagggacgatcatccgcatcaccc
actcaaagtcaaaatgacatccaagcagttccgtctccggaatcaccacggggccctaag
ctatcactgtctcaactgacagctacctcacgctccccgaccgtcagccattccagcccg
gggttgccgtggcaacagtcgcttccttcccttctccagccttctccgacgacgccggcc
cgctggccgtcacatgttgcgagatctccttccccgagcgttcacagacatgcgcaaaat
acacatacggaggcctgctcagctctcagcagcactacacaccttgagatggaccttcag
ccagtaagggatgggacgcattcagctaaacacgaggaagaccaacttcgggagctcccg
ttcactcttgttcatgcccctgtcattacagcgggtgtgactgcaccaagtttgtccaca
gtcagttccaggagttcactggcccacctctactctgctggcttccccgatattgtggat
tcgaaagggcaggtggcagaagtcttggaccccacagagccggtgccctttgagccacac
cgtgaagaaatggatccactgcaggagaatcttctggtcttccagtttcttgcatttaca
agaatgccaatggtggggattggtcccaaatggcctgccaacatctacttcaccttccag
ttctaccgttttccaccagtcacgtcacagcagcttcgactacagaacagcgacaaggtg
cagcagaaaacaagcgagctgcttccttgtgtcctgacttccatcaacaatgacggctct
gtcaactctgattctcctgggctgcaggtgcagttcagagtcgatgaccgttttctaaag
ccaggggagaagcagtggttcctgcgctacctggcccttcacaccatgcatgttgacgtc
tgggacagtgactcattgctgctcatcggttcaacagccattgagctcaagcacatgttg
cggcacggtaaaatggcagtgcaagcactccatgaggtggaggttctgacaaccgaccat
atgggagaggaaagcttgcagatgggcgacgcctccaacaacgccatggcggtcaacacc
gtcgtcaggggtcggctgcatgtccgcactgggaacattgggtcccaagcagatctgagt
aggagaaggacggtggaccgcatgcagtctcattcttacatcatcatcccccgtgaagtc
actggcagcttcgcgggggggagcttgtccaccaggaatattctccaatttaatgcgaag
aacaccgcacaggcgcagagactgcaggtacaagagaaacacgggctggcgtacagcgct
aggctcaacaatgccaccatcttgtcagggggaaaaaacaagcccgacagtggccatcgc
aagctggagtgtatggccgccgtgcaccaaaaggaagcttgtcaaacgactcgtgtcacg
gatggggctaacgaagttcctttgaccaaagaactttcgcgggcccccttctttcaagat
ctgaacaaggctgagggcatcagcaacatgctttgccacgccatcaccacccctcatcaa
ctctttgccagcctcggctctgctgagtacatggaatttgcgctaaaaaaccctttcaac
actcctcagacagtcaccatccacagcaatgatcctgagctcagtgtcatcaccaacaca
aaagagtggcagtactttaaagaactgaccaaaacacccacttcgttggaggaggacatg
tttcacgtggaggaaggagctccagggccaaaggtttacctccgaccgaaggagaccgtt
catatcccgctcaaataccagagcttcctgtgtgaccacaacatgactcctcaggggccg
agctttctacctccaagcaaaagttcgaatgcggctaagaagattccgtccaatatcgtt
gctgccaaaaccgtcaaggtttctttcaaagcagaaaacggtgaccccatcgccatctgc
caggtgatcgtggagccatcgcctcacattgtcgatcagacgttccgactttaccaccca
caactcagtttcctcaagaaggccatccgcttgccgccctggcacaccctctctgccgtc
ggaggcacggatgccgagactcacatttctgtacgctgcagtgacccaaacgtcatctgt
cagacccgaatgatggtgccaggagagcctcaggatgtgtacttgaaagtacccggaggt
ccgagtcccaacatcaaaatgttctttgtgatggttttcactgataagtggatggccgcc
ccttcgcagatctggcaggtttacgtgcactttgtggagcgggtggatgtcagctgtgtc
accggccagcggagttgtcaatcactggtgctgagggggaggcaggctgctcgcaaggtc
aaatgtttctcatcacatccgcaggagattgaggtcaaccctggaggtgttttcctgttg
ccccccgcaggagtgcaagagctccaactgaaggtgcagccatggcgggcaggcagtcgc
ttcctgtacgtgaacgcggtggacgtggaccagaggcagttagtcaccgcttggctactg
tgtctcaacgtaaacaggcctgtgctgtccaaggcatttgaagtatgtgtcccagttagc
agtggtcgtggcagctccaaaaaaatcacctacaccaacccttacaccagcggccgcact
ttcctgctccattccgaccatccggatttgctccaattcaaggaggataaattccagctt
gatgggggagaaagttacaccatcggactgcgcttcgcccccagccagagtgcgggttca
gtggagatcctggtctacgtgaacaacctggaggagaagacggaggagacgttctgcgtg
aaggtcaactactcatga
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