Hippocampus comes (tiger tail seahorse): 109512119
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Entry
109512119 CDS
T04969
Symbol
smg5
Name
(RefSeq) LOW QUALITY PROTEIN: protein SMG5
KO
K11125
protein SMG5
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109512119 (smg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109512119 (smg5)
03032 DNA replication proteins [BR:
hcq03032
]
109512119 (smg5)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
109512119 (smg5)
mRNA cycle factors
Common to processing body (P body) and stress granule
109512119 (smg5)
DNA replication proteins [BR:
hcq03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
109512119 (smg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
109512119
NCBI-ProteinID:
XP_019719180
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MFLHPVDYGRKAEELLWRKVYYEVIQVIKTNKKHIHSRSVLECAYRTHLIAGVGFYQHLL
LYIQSHYPCRCFSDRLLITSRACXVGVSMSPAGRKKVLSASPKEMEWAQMACHRCLVYLG
DLARYQNELAGVEAEHLAERFYHQALSVMPHVGMPFNQLGTLAGSKFYNVEATYYYLRCI
QSESPFEGAYGNLKRLFDKAAKMYQQVKKQEMKKLSPSRQRSRDIKRLLVSFMYLQSLLQ
PKNSLMESELTSLCQSVLEDFNLVLFYLPAALPLRGHNAAARHSLSEEDEEQQQQQQQQQ
QQQPATDGSCAVLPDALVFKMVVTCLMVVHSLKRGGSKQYSASIAFTLALFSHLVNHVNI
RLQAELEETESQVPQLNTDATGECPPSEANLPALGASLDQCFSRWARDRRDGEEDDAKGA
GGQTLSVANGPLGANDASISSNLQAMSSQLFQAKRCFRLAPTFSNMLLRPQAASAGPTSA
DDSIAAAPSQETPSSASQSPCDVNQNTPNGVNENDLDSDSEGSQRSAPSVHSEKTLAETP
DWPLDNISKYGPRCDRGMPLLCLAEADLNPDVTELLGECERPALLQTLLLPEDVALRHLP
ALAVAHRHLDFAHRGASLSPLQECVVRVCCIRSFGHFLTSLQGNVLHFNPEAGIFTSVSQ
SQADNLLQQAKAQFRMAEEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSSMSPYLV
PDAAALCQHLGLIRSLAASGCFIVIIPRTVIDGLAILGEKLETLHQDFVVLMAPSCCRYI
RCQRESGRSFERDKLKRQDLDAWHLYKMVDSCRQLTVSQSIDDDTAGMVTLLTGHPVDQL
CERSAAMKSAVQAASSAGMELKNIADFYRQWKEMG
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgcacccagtggactacggccgcaaggcggaggagttgctgtggaggaaggtt
tactacgaagtcatccaagtcatcaagaccaacaagaagcacatccacagccgcagcgtc
ctggagtgcgcctaccgcacgcacctgattgccggcgtgggcttctaccagcacctgctg
ctctacatccagtcgcactacccgtgcagatgtttctctgaccgacttttgataacaagt
cgtgcctgctaagttggtgtttccatgtcacccgcaggccggaagaaggtgctgtcggcc
tcccccaaggaaatggagtgggcccaaatggcctgtcaccgatgcctggtctaccttggc
gatctcgcgcgctatcagaacgagctggccggcgtggaggcggagcatctggctgagagg
ttctaccaccaggcgctgtccgtcatgccgcatgttgggatgcctttcaatcaactgggg
acgctggctggaagcaagttctacaatgtggaagcaacctactactacctacgctgcatc
caatccgagagccccttcgagggcgcttatggcaacctgaagcgcctctttgacaaggcg
gctaagatgtaccagcaagtgaagaagcaggagatgaaaaagctttcgccgtctcgacag
agatccagagacatcaagcgtctcctggtgagcttcatgtacctgcagagtctgttgcaa
cccaagaacagcctgatggagtccgagttgacctcgctgtgccagtcggtgctggaggac
ttcaacttggtgctcttctacctgccggcggcactgccgctgcgcggccataacgccgcc
gcacgccactccctcagcgaggaggacgaggagcagcagcagcagcagcaacaacaacaa
caacaacaacctgccaccgatggctcctgtgccgtgctgcccgacgcgctggtcttcaag
atggtggtgacgtgcctgatggtggtgcacagcctcaagagaggaggctcaaagcagtac
agcgcgtccatcgcttttacgctggcactcttctcccatctggtgaaccacgtgaacatt
cggctgcaggctgagctggaggaaacggagagccaggtgccgcagctgaacacggacgcc
acaggtgagtgtccgcccagcgaggccaatttacccgcactgggagcttctcttgaccaa
tgttttagcagatgggcccgggaccggcgggacggcgaggaggacgacgccaagggggcc
ggcggccaaacgctttctgttgccaacgggcccctgggggccaacgacgccagcatcagc
agcaacctccaggccatgtcctcgcagctcttccaggccaagcgctgcttccgcctggcg
cccaccttcagcaacatgctgctcaggcctcaagcggcctccgccgggcccacttccgca
gacgactccatcgccgccgcgccctcccaggagaccccctcctctgccagtcaatcaccc
tgcgatgtgaaccagaatacccccaatggggtcaatgaaaatgatttggactcggactcc
gaagggagccagcgcagcgccccgtcggtgcacagcgagaagacgctagcagagacaccg
gactggcccttggacaatattagcaaatacggtccccgttgtgatcgcggcatgccattg
ctgtgcttggcagaggccgacttgaacccagacgtgacggagctgctgggcgagtgcgag
cgacccgcgctgctccagacgctactgctgcccgaggatgtggcgctgaggcacctgccc
gccctcgccgttgcccaccgccacctggactttgcccaccggggcgcctccctcagcccg
ctacaggagtgcgtggtgcgcgtgtgttgcatccgcagttttggccacttcctcaccagt
ctccagggcaacgtgctgcacttcaacccggaggccggcatcttcaccagcgtcagccag
tcgcaagccgacaacctgctgcagcaggccaaggcccagttccgaatggctgaagaggag
gcccgcagaaatcgcctgatgcgggatatggctcagcttcgactccagttggaagtgtct
caactggagggcagccttcagcagcccaaggcgcagtcgtccatgtcgccctacctggtg
cccgatgccgccgccctctgccagcacctgggtctcatccgaagtctcgccgccagcggc
tgcttcatcgtgatcatccccagaacagtcatcgacggactagccattttgggtgaaaaa
cttgaaactctgcatcaggacttcgttgttctaatggctccttcatgttgcaggtacatc
cgatgccagagggagtctggacgaagttttgaaagagacaagctaaaacgtcaggacctc
gatgcctggcatctgtacaaaatggtggacagctgccgccagctcaccgtctcccagagc
atcgacgatgacacggccggcatggtcacccttctcaccggacatccggtggaccaactg
tgtgaacgctcggcggcaatgaagtctgccgtccaggcggcgagctcagcgggcatggag
ctgaagaacatcgcagacttttaccggcagtggaaggagatgggctga
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integrated database retrieval system
