Hippocampus comes (tiger tail seahorse): 109512212
Help
Entry
109512212 CDS
T04969
Symbol
smarcc1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109512212 (smarcc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109512212 (smarcc1)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109512212 (smarcc1)
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109512212 (smarcc1)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109512212 (smarcc1)
PBAF complex
109512212 (smarcc1)
GBAF(ncBAF) complex
109512212 (smarcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
109512212
NCBI-ProteinID:
XP_019719339
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MATAATTASGPTTGPVGGGGTAVGRKKDGGPSAKFWECSETISQLETVRLWIGKHYKKYV
QNDSPSSKSLAGLVVQLLQFQEDSFGRKVNNPALTKLPAKCFLDMKAGGALCHILGSVYK
FKSEQGWRRFDLQNPSRMDRNVEMFLNVEKNLVQNNCLTRPTVYLSPDMEAKQASKLKDA
IKRHQGSITEDKSKATHLIFPSPSQQDEEEWLRPVMRKDKQVLVHWGLYPDSYDTWMAAG
EVDGDVEEPPSADRPWKVHARWVLDMDAFNEWMNEEDYEVDDNKKPVTFRQKIFLKEEES
SSRTPDRKERKANSASKKRRRSPSPPSTPAESRKKGGKKSQGHYWKRRGHRGEEDDTEDD
VTKDLDDSSTGASIEEGSISKNAHSKKDAESTPLKGDNGADIDDMEDDSVLSGGKDDEDQ
NKADMSRLMDAGEDNVTEQTHHIIIPSYSAWFDYNCIHEIERRALPEFFNGKNKSKTPEI
YLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAIMRAHAFLEQWGLVNYQVDSDSRPL
PMGPPPTPHFTVLADTPSGLMPLNHRPPPIPPPQQMANFSDKMKDKAIDLQNFGLRTDQY
KRNSKGKSVASSREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIED
PYLESSESSLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAARAALEEFSRVREE
VPAELVEAHVKKVQEAARNTGKVDPAFGLESSGIAGTAPEEPEKTEATDGDKTETDTDSQ
QGDKAESKDETEKTSESTERNEKMEAPEKVKKESGEVSEREDESEDGHEAKSTPADKDEE
ESMETSSSEQEEKDKDDKVSTEEGEEKRKKPEHDMGEGNIATAAAAALASAATKAKHLAA
VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQ
LKYAEMKARQQMEQQAAAVAAAQAQGQGHAPGPGPHPGPPGMHPGGPPPHHGAPPPHHGG
PLPGAAMHPGYPPMGHHPMAPHHPGQTAAPMGPGQPLPGRMMAGPPAAGPPPGGIPPMMP
PRHPGAPNGMYPGPAPAQPDVVPPLPVGPPAPSGGRAADN
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcgaccacggctagcgggccgaccaccggccccgtcggcggcggcgga
accgcggtggggcgcaagaaagacggcggcccgtccgccaaattctgggagtgttccgag
accatatcccaactggagacggtgcgtctgtggatcggcaagcactacaagaagtacgtc
cagaatgactcgccctccagcaagtctctggctggcctggtggtgcagctgcttcagttt
caggaggattcgtttggacgcaaagtcaacaatcccgctctcaccaagctgccggccaag
tgcttcctggacatgaaagcgggaggtgctctctgccacatcctgggctccgtctacaag
ttcaagagcgagcagggatggcgacgctttgaccttcagaacccttcccgtatggacagg
aatgtggagatgttcttgaatgttgagaaaaacttggtgcagaacaactgcctgacccga
cccaccgtctacttatctcctgatatggaagccaagcaagccagtaagctcaaagatgcc
attaagaggcaccagggttccataactgaggacaagtctaaggctacacacctaattttc
ccatctccgtcgcagcaagatgaagaagaatggctgcgtcccgtcatgaggaaagataag
caggttctggtccactggggactctatccagacagctacgacacctggatggcagccggc
gaagtggacggcgacgtggaggagccacctagtgccgaccgaccgtggaaggtccatgcc
aggtgggtcctggacatggacgcattcaacgagtggatgaatgaggaagactacgaggtg
gacgacaacaagaagcccgtcaccttccgccagaagatcttcctgaaggaggaggagtcg
tcttcccgtacgcccgatcgcaaggagcgcaaggccaattcggccagcaagaagaggagg
cgctcgccctcgccgcccagcacccccgccgagtcccggaagaaaggtggaaagaagagc
cagggacattactggaagcgtcgaggacaccgcggcgaagaggatgacacggaggatgac
gtcaccaaggacctggacgactcgtctactggtgcgagcatcgaggagggaagcatttct
aagaatgcccattcaaagaaagatgccgagagcacgcctcttaaaggggacaacggtgca
gacattgatgacatggaggatgactctgtgctgtccggcgggaaggacgacgaggaccag
aacaaagcagacatgagccgcctgatggatgccggtgaggacaacgtgacggagcagacg
catcacatcatcatccccagctacagtgcctggttcgactacaactgcatccacgagata
gagaggagagccctgccagagttcttcaatgggaagaacaagtccaaaactccagaaata
tacctggcttaccgcaacttcatgatcgacacttaccgcctcaacccccaagagtacctc
acctccacctcttgccgcaggaacctgacgggcgacgtgtgtgccattatgagggctcat
gctttcttggagcagtggggcttggtgaactaccaggtggactcagacagtagacctttg
cccatgggacccccacccaccccccacttcaccgtcctggccgacacaccctctggcctc
atgccccttaaccacagacctccaccgattccaccgccgcagcagatggccaacttctct
gacaagatgaaagataaagccattgacctccagaactttggcctccgcaccgaccagtac
aagaggaactcaaagggtaaatcagtggcgtcctctcgggagtggaccgagcaggaaact
ttgctcctgctagaggctctggagatgtacaaagatgactggaacaaagtgtcggagcat
gtgggttcacgcacacaagatgagtgcatcttgcacttcctgcgcctacccatcgaggac
ccctacttagagagttcggagtcgtcgctgggcccgctggcctatcagcccattcccttc
agccagtccggaaaccccgtcatgagcaccgtcgccttcctggcctccgtggtggacccg
agggtggcatccgctgccgccagggccgcgctcgaggagttttcccgcgtgcgtgaggaa
gttcctgccgagctggtggaggctcatgtgaagaaggtgcaagaggcggccaggaacact
ggcaaggtggaccccgccttcggactggagagcagtggcattgctggcaccgcccccgag
gagccagagaaaacagaggccacagatggtgacaagactgagacggacacagactcccag
cagggggataaggctgagtccaaggacgagacggagaagaccagcgaatccaccgagaga
aacgagaagatggaggctcctgagaaggtgaagaaggagtccggggaggtgtccgagaga
gaggacgagagcgaagatgggcatgaagccaagtccacgcctgctgacaaagatgaagag
gagtccatggagacgtcctcctctgaacaggaggagaaggacaaggacgataaagtcagc
acagaggaaggggaggagaagaggaaaaagccggaacatgacatgggcgaaggaaacatc
gccacagcggcggccgccgccctcgcctctgctgccaccaaggccaagcatctggcggcg
gtggaggagaggaagatcaagtcactggtggctctgctggtggagactcagatgaagaag
ttggagatcaagctgaggcactttgaggagctcgaaacgatcatggaccgcgaaaaggag
gctttggagctacagcgtcagcagctgttgactgagcgtcaggcgttccacatggagcag
ctcaagtacgccgagatgaaggctcgccagcagatggagcagcaggcagcagcggtagcc
gccgcccaggctcagggccagggccacgcccccggacccggcccccacccgggaccaccg
ggcatgcatcccggcggcccgcccccccaccacggagccccaccgcctcaccacggagga
cccctgccaggtgccgccatgcaccccgggtacccaccgatgggccaccaccccatggcg
ccccaccacccaggtcaaacagcagctcctatgggcccgggtcagcccctgcctggacgc
atgatggccggaccccccgccgccggacccccacctggtgggattcctcccatgatgccc
ccgcgccacccaggagctcccaatggcatgtacccaggaccagcgcctgcacaacctgat
gttgtgcccccactccctgttggccctccagcaccctctggtggccgtgcagcagacaac
taa
DBGET
integrated database retrieval system
