Hippocampus comes (tiger tail seahorse): 109512496
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Entry
109512496 CDS
T04969
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109512496
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hcq01001
]
109512496
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109512496
03036 Chromosome and associated proteins [BR:
hcq03036
]
109512496
Enzymes [BR:
hcq01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
109512496
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109512496
Protein kinases [BR:
hcq01001
]
Serine/threonine kinases: Other
TAF1 family
109512496
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109512496
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
109512496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
109512496
NCBI-ProteinID:
XP_019719847
LinkDB
All DBs
Position
Unknown
AA seq
2076 aa
AA seq
DB search
MSDSDSDEDQDRPFSITGFLFGNINEDGQLEDDSVLDNESKKHLAGLGNLGLGSLITEIT
ANEDDEQEESKTPTNVDSEGWVKSTEDAVDYSDISEVAEDETRKYRQAMGSLQPCRKPGD
EDDYDADCEDIDSKLMPPPPPPSLSTAVKKEEPSPQSANVGEEGDGIILPSIIAPSSTAE
KVDFSSSSDSESETDRPGPVSGPGGQPDSLTLPLAGIMQKDAAKALPGVTELFPEFRPGK
VLRFLRLFGPGKNMPSVWRSARRKKKRKHRDVQPGTPPPEGELIEQDQDKKSGWVYEYAN
PPPPEQCLSDDEITMMAPVESKFSQTCCDSDKEAESRPKVAEWRYGPAQLWYDMMGVPED
GSNFNYGLKLKEKDSSDPQVQNTLEEMAKTANEDARWHDEHDDPNNEHEEDKLALENELF
LMVTQLQWEDDIIWNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLTRSNSQLV
PPTPPLMPKTLSITGLKRDKSSHDNQSNQEDDAPWFSIFPIDNEELVYGRWEDNIIWDDQ
EMDHFLNPPVLTLDPNDENIILEIPDEKEASTSHSPSKENKKETAIKKSRILLGKTGVIK
DEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPALELRQPFFPTHMGP
MKLRQFHRSTLKKYSFGPLAQPGPHPVQPLLKHIKKKAKMREQERQASGGGDMFFMRTPQ
DLTGKDGDLILAEYSEEYPPLIMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSP
FLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLVIRTRHGYYIRELVDIMVVGQACPLY
EVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPVHSESSIRKRLKLC
ADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCSYYSMQVAEQRLKDAGYGEKSFF
APEEENEEDFQMKIDDEVRTAPWNTTRAFISAMKGKCLLEVTGVADPTGCGEGFSYVKVP
NKPTQQKQATNVHKALMLDDKEPQPAKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIK
KLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLE
STEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERRELQRMLMGEES
DRDNKGRKERRKVLSSSLSTSSHKDDDTSSVTSLNSAATGRRLKIYRTFRDEDGKEYIRC
ETVRKSAVIDAYTRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKDK
FKGPPEKKSKKMKERPDLKVKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQE
EELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGN
AVHCDYLNKPHKAIHRRRTDPMVTLSSVLESIINDMRDHPNTYPFHTPVNAKVVKDYYKI
ITRPMDLQTLRENVRKRMYPSREEFREAVELVYKNSATYNGAKHPITQVAQSMLDLCDTK
LKEKEDRLVRLEKAINPLLDDDDQVAFSFILDNIVTQKMMVVPDSWPFHHPVNKKFVPDY
YKVIIDPMDLESIRKNISKHKYQNRDAFLSDVTLIHTNSIKYNGRDSPYTKTALDIISVC
RQTLDEYDEHLTQLEKDISTAKEAALDAADFESLEMAHGSYMTQYDELDKDISTAKGSFM
DLRLASSSPYIAQPADLFDSGASGPSRAPSGLFSDGPLVVASEKRGGQARHGRRLREEES
DVDIEGFEEEDDGKPKTPAPAEDAEGDLEDDDDDEEMLLPPRRRMHNRQEEENDRRSNPL
THASVLYQDLLMSDGEDDASEEEGDNPFSSIHLSESGSDSDREVDVRPPPPRRAQETARM
GMEDESMMSYEGVDDGPHMEDSNVSYGSFEESHGQMQASARGNAEDDGISEEEEDEEEDD
AHRKAPAPHSQYDEKDGKWSFMDLERHNTTPAQYAPQPWQLRENRQDDGNSEEDEEDEED
DARRRGPAVLSQVQLSEDEESEEFRSIGGDSDMDSD
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcagacagtgacgaggatcaagatcgcccgttctccattactggcttcttg
tttgggaacatcaatgaagatggccaactagaggacgacagtgtcctggacaatgaatcc
aaaaagcatctggctggtttgggtaatctgggtctgggctccctcatcacagagatcaca
gccaatgaggatgatgagcaagaagaaagtaaaaccccaacaaatgtggattctgagggt
tgggtgaaaagcactgaagatgcagttgattattctgacattagtgaggtcgctgaggat
gaaacacggaagtatcgacaggccatgggatctttgcagccctgcaggaaaccaggtgat
gaagatgactatgacgcagattgtgaggatattgattcaaagctcatgcctcccccgcca
ccaccgagcctttcaacagctgttaaaaaagaagagccctcccctcagagtgcaaatgtc
ggggaagagggtgacggtatcatcttgccgtcgatcattgcgccatcatcgactgccgaa
aaggtggatttcagcagttcctctgactctgagtcagaaaccgaccgcccaggcccggtt
tctggtcctggaggccagccagacagtctcaccctcccgcttgctggcatcatgcagaaa
gatgctgccaaagcactacctggtgtcacagagctcttcccagagttcagacctggaaag
gttctgaggttcctacgactatttggcccagggaagaacatgccgtctgtatggaggagt
gcccgcaggaagaaaaagaggaagcaccgggatgtccagcctgggacaccgccacctgag
ggagaactcatagagcaagaccaggataaaaagtctgggtgggtttacgagtacgctaac
cctccgcctcctgagcagtgtctctccgacgatgagataaccatgatggcacctgtggag
tccaagttttcacagacttgttgtgacagcgacaaagaggcagaatcacgacctaaagtt
gccgaatggcgatatgggcctgcccagctctggtatgacatgatgggggtccctgaagat
ggaagtaatttcaattacgggctcaagctgaaggaaaaggattccagtgaccctcaggtg
caaaacacacttgaagaaatggcaaaaactgctaacgaggatgcgagatggcacgatgaa
catgatgaccccaataatgagcatgaggaggacaaattggccctggagaatgaactcttc
ttgatggttacgcaactgcagtgggaggatgacattatatggaacggggaggatgtaaag
cacaagggcaccaagactcaacgtgctagtcttgcggggtggttaccctcgagcatgacg
cgcaacgccaacgcttataacgcacaacaaggtttgacgagaagtaattcacagttggtc
ccacctacaccccctcttatgcccaaaaccttgtcaataactggcttgaagcgggacaaa
agcagccacgataatcaatctaatcaggaagacgatgcgccttggttctcaattttcccc
attgacaatgaagagttagtgtatgggcgctgggaagacaacatcatctgggatgatcag
gaaatggatcacttcctcaatcctccggttcttacactggatcccaatgatgagaatatc
attcttgaaattccagatgaaaaggaagcatcaacatctcattccccctcaaaagagaat
aagaaggaaacagcaatcaaaaagagccgcatcctccttgggaaaaccggggtgataaaa
gacgagccgcaacagaacatgtctcaacctgaggtgaaggacccctggaacctctccaat
gacgagttctactatcccaaacagcagggtctgaggggcacatttggtggtaacatcatt
cagcattccatcccagccctggagctgaggcagcccttcttccccacccacatgggcccg
atgaagttgcggcagttccataggtccacgttgaagaagtactcgttcggacctttggct
cagcctggtccacaccctgtccaacctctgctcaagcacattaagaagaaggcaaagatg
cgagagcaggagcggcaggcttctggaggcggagacatgttcttcatgcgcaccccgcag
gatttgacgggcaaagatggagatctgatcctggcagagtacagtgaagaatatccccct
ctcatcatgcaagttggcatggccaccaagattaaaaactactataaaaggaaacccgga
aaggatcctggtgcaccagactgcaaatacggagaaactgtatactgtcacacgtcacct
tttctgggttctctgcatcctgggcagctgctccaagcttttgaaaacaaccttttccgg
gcccccatttacttacacaagatgccagagacggattttttggtcatcagaacacgccac
ggctactacattagagaactcgtggacattatggtggttggtcaggcctgccccttgtat
gaggttcctgggcccaactccaaacgagcgaacacccacataagagacttccttcaagtg
ttcatttatcgcttgttctggaagagcaaggatcgcccgcggagaattcgcatggaggat
ataaagaaagcatttccggttcattctgagagcagcatcaggaaaaggctcaaactctgt
gccgacttcaaacgcacagggatggattccaactggtgggtgctgaagcctgatttcaga
ttgccaacagaggaagagatccgagccatggtgtctccggaacagtgttgctcttactat
agcatgcaggtggccgagcagagactcaaggacgctggatatggcgaaaaatcattcttt
gcaccggaggaggagaatgaagaggactttcaaatgaagattgacgatgaggtgcgaaca
gccccctggaacacaacaagagccttcatctctgccatgaaggggaaatgcctgttggag
gtgacaggtgtggctgacccgacgggctgcggagaaggtttctcttacgtcaaagtgccc
aacaagcccactcaacagaagcaagcaactaatgtccataaagccttgatgctggatgac
aaggagccacagcctgctaagaagactgtaacaggcacagatgccgatttgagaagattg
tcactgaagaatgccaaacagctgctgcgcaagtttggtgtaccagaggaagaaataaaa
aagctctcgcgctgggaggtgattgatgtcgtgagaaccatgtcgactgagcaggcgcgt
tcaggagaaggccccatgagcaagtttgccagaggttcacgtttctcggtagcagagcac
caggagcggtacaaggaggaatgtcagaggatctttgacctgcagaataaggtgctggag
tcgacggaagtgctctccacagacacagatagcagctcagccgaggatagcgactttgag
gaaatgggaaagaacattgagaacatgctgcagaacaagaagaccagctcacagttgtca
cgcgagagggaagagcaggagcggcgggagctgcagcggatgctgatgggggaggagagc
gatcgtgacaacaagggccggaaggagcgccgcaaagtcctgtccagctcattatccacc
agctcccacaaagatgatgacacatcgtcagtcaccagcttgaactccgccgccacagga
cggcgactcaagatctacagaaccttcagggacgaggatggcaaggaatatattcgctgc
gagacagtgcgcaaatctgctgtcattgatgcctacacgaggatcagaaccaccaaggat
gatgaattcatacgaaagtttgccctcttcgatgagcagcatagagaagagatgcggaag
gagcgtcggcgaatccaggagcagctgaggagactaaagcgaaatcaagaaaaagacaaa
ttcaagggtcctccggaaaagaagtccaagaagatgaaagaaagaccagacctcaaggta
aaattaaagtgcggtgcatgtggtgccatcgggcacatgaggacgaacaagttctgcccg
ctgtactatcagaccaacgcgcccccttctaacccagtcgccatgacagaagagcaggag
gaggagctcgaaaagaccgtcatccacaatgacaatgaagaactaattaaggtggaaggc
acaaagatcgtgcttggcaagcaactcattgaaagtgccgatgaggtgcgcagaaagtcg
ttagtcctcaagttccccaagcaacagctccctccaaaaaagaagcgacgagttggcaat
gctgtgcactgtgactatctgaataaaccgcacaaggcgatccaccgcagacgcactgac
cccatggtgaccttgtcctcagtcctggagagcatcattaacgacatgcgtgaccaccct
aacacatatccgttccacacgccggtaaacgccaaggttgtgaaggactactacaaaata
ataactcgcccaatggacctgcagacgcttcgggagaatgtccgcaaacgaatgtacccg
tccagggaggagttccgagaagcagttgagcttgtttacaagaacagcgccacatacaat
ggagcaaagcatccgatcacgcaagttgcacagtcaatgctggatctgtgtgatactaag
ctgaaagagaaggaggacagactggttcggctcgaaaaagccatcaatcctctgcttgat
gatgacgatcaggtggccttctccttcatcctggacaacatcgtaacgcagaaaatgatg
gttgttcctgactcatggccgttccaccatcctgtcaacaaaaagtttgtgcctgattat
tacaaggtgattatagacccgatggacctggagtccatccgcaagaacatctccaagcac
aagtaccagaacagagacgccttcctctcagatgtcactctcatccacacaaacagcatc
aaatacaacggccgcgacagtccatacaccaagacagcactcgatatcatcagtgtgtgc
agacagaccctggatgagtatgatgaacatttgacacagctggaaaaggatatctccacg
gccaaagaggcagctctggatgccgctgactttgagagtctggagatggctcacggttca
tatatgacacagtatgatgagctcgataaggacatctctacagccaaagggtcattcatg
gacttgaggctcgcctcgtcttcgccttacatagcccagcctgctgatctgtttgacagc
ggcgcttcaggcccgtccagggcacccagcggccttttctctgatggacctctagtggtt
gcttctgagaagagaggggggcaggctcggcacggcagaaggctcagggaagaagaatca
gatgtggatattgaaggctttgaggaagaagatgacggcaaaccgaaaacgcctgctcct
gcagaggatgcagaaggagatctcgaggatgacgatgacgacgaggagatgttgctgcca
cctcgcagacgcatgcacaaccgtcaggaggaggaaaatgacagaaggtccaaccccctc
acccatgccagcgtgctatatcaggacttgctcatgtccgacggagaggatgatgccagt
gaggaggagggcgacaatccattctcctccattcatttatcggagagtggtagtgactct
gatcgagaggtcgacgtgcgtcctccacctccaaggcgagctcaggagacggcgcgcatg
ggcatggaggacgagagcatgatgtcatacgaaggggtcgatgatggacctcacatggaa
gacagtaacgtcagctatggcagctttgaggagagccacggtcaaatgcaagcttcagcc
aggggtaacgcagaagacgatggtatcagcgaggaggaagaagacgaggaagaggatgac
gcacacaggaaagccccagctccacattctcagtatgatgagaaggatggcaaatggtca
ttcatggatttggaaaggcacaacacaacacctgcacaatacgcaccgcagccgtggcag
ctgcgagaaaacagacaagatgatggcaacagcgaggaggacgaagaagacgaagaggac
gatgcacggaggagaggtccagccgttctctcgcaggtccagctcagtgaggatgaggaa
agtgaagaattcagatccatcgggggagatagtgacatggactcggactag
DBGET
integrated database retrieval system
