Hippocampus comes (tiger tail seahorse): 109512621
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Entry
109512621 CDS
T04969
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109512621 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109512621 (taf5l)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109512621 (taf5l)
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109512621 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
109512621 (taf5l)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109512621 (taf5l)
STAGA complex
109512621 (taf5l)
TFTC complex
109512621 (taf5l)
SAGA complex
109512621 (taf5l)
SLIK complex
109512621 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
RMC1_N
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
109512621
NCBI-ProteinID:
XP_019720050
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MIQQMRRKQGDKHVKWMQRKVMKRVRTEQIQYAVTQYLKRRQYVDVADGSLKATKLFQTA
EEMAASLTVQSESGCANVVSAAPCQSDPQQYESQYARLRCFLSEADISWAKEVSALLYPL
FVHLHLDMVRCGLKSAADGFHARFHAAFLQDADQRATAEQLRHVLGAADAAASPRLAAFL
EHKYVVRLSEGAHDYLLRYLQSDDNGAICRVLAAHLQLEVSASKRTDYQLYGAGTAPSAG
APDSTRARADGGEAAAAAAGEQQNQAALEALRDCIKKVREGPPSLTTVCFYAFRHTEQLL
NTAEVSPDSRLLAAGFDNSAVKLWSLRARKLKAKPHVSDVSRVRLACDVLEEDMDEEDAS
GSEIKMLRGHSGPVFRTAFLTDSSGLLSCSEDTSVRYWDLGSFTNTALYQGHAYPVWDVD
VSPCSLYFASGSQDRSARLWTFSRAYPLRVYAGHLADVDCVRFHPNSNYLATGSSDKTVR
LWSAQQGASVRLFTGHRGPVLALAFSPDGKYLASGGEDQRVKLWDLASGALLKDLRGHSD
AVTGLSFSPDSGLVASSSADNTVRMWDVRGALPLAAGGVSL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgatccaacagatgagaagaaagcagggtgataaacatgtcaagtggatgcagagaaag
gttatgaagcgcgtccgcacggagcagatccagtacgccgtgactcagtacctcaagcgc
aggcagtatgtggatgtggccgacggctccctgaaagccaccaaactcttccagacggct
gaggagatggctgccagcctcaccgtccagagcgagtcggggtgcgccaacgtggtgtcg
gcggcgccgtgccagtctgacccgcagcaatacgagtcgcagtacgccaggctgcgctgc
ttcctgtcagaagccgacatctcgtgggccaaggaagtgagcgcgctcctgtacccgctc
ttcgtccacctccacctggacatggtgcgctgcggcctcaagtcggcggcggacggcttt
cacgcgcgcttccacgccgccttcctgcaggacgccgatcagcgggccaccgccgagcag
ctgcgccacgtcctcggcgccgccgatgcggcggccagcccccgcctcgccgccttcctg
gagcacaagtacgtggtgcgcctcagcgagggcgcccacgactacctgctgcgctacctg
cagagcgacgacaacggcgccatctgcagggtcctcgcggcgcacctgcagctggaggtg
agcgcctccaaacggaccgactaccagctttacggggcggggacggccccgtccgccggc
gcccccgactccacccgggcgagagcggacggcggcgaggcggcggcggcggcggcgggc
gagcagcagaaccaggcggccctggaggcgctgcgcgactgcatcaagaaagtccgcgag
ggtccgccctcgctcaccaccgtgtgcttctacgccttccggcacacggagcagctgctc
aacaccgccgaggtgtcgcccgacagccgcctgctggccgccggcttcgacaactccgcc
gtcaagctgtggagcctccgcgcccgcaaactcaaggccaagccgcacgtgagcgatgtg
tcgcgggtgcgcctggcctgcgacgtcctggaggaggacatggacgaggaggacgcctcg
ggcagcgagatcaagatgctgcgcggccacagcggccccgtgttccggacggccttcctg
acggacagctcgggcctgctgtcctgctcggaggacaccagcgtgcgctactgggacctg
ggcagcttcaccaacacggcgctctaccagggccacgcctacccggtgtgggacgtggac
gtgagcccgtgcagcctctacttcgccagcggctcgcaggaccgcagcgcccgcctctgg
accttctcgcgggcgtacccgctgcgcgtctacgccgggcacctggccgacgtggactgc
gtccgcttccaccccaactccaactacctggccaccggctccagcgacaagacggtgcgg
ctgtggagcgcccagcagggggcctcggtgcgcctcttcaccggccaccgcgggcccgtg
ctggcgctggccttctcgcccgacggcaagtacttggcctcgggcggcgaggaccagcgc
gtcaagctgtgggacctggcctcgggggcgctcctcaaggacctgcggggccactcggac
gccgtcaccggcctgtccttcagccccgacagcggcctggtggcgtcctcgtccgccgac
aacacggtgcgaatgtgggacgtgcgcggcgcgctgccgctggcggcggggggggtttct
ctgtga
DBGET
integrated database retrieval system
