KEGG   Hippocampus comes (tiger tail seahorse): 109513057
Entry
109513057         CDS       T04969                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq04510  Focal adhesion
hcq04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109513057
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109513057
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 ATG17_like F5_F8_type_C DUF6415
Other DBs
NCBI-GeneID: 109513057
NCBI-ProteinID: XP_019720819
LinkDB
Position
Unknown
AA seq 1807 aa
MLSLLIRVTTKMLRVQLVLLLGLLVFTLAQQVRPVVGQDQDHISVPELSDVCTEGSCYPA
TGDLLIGRAHQLSSTSTCGLTRPEPFCIVSHLQEEKKCFMCDSVAPYSEPDNQTGSHRIE
NVVTTFAPNRLKTWWQSENGVENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFG
KTWNVYRYFAYDCETSFPDVSVGPMKKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIH
DPYSSRIQNMLKITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHA
SECAPVQETGSVREGKVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNC
NQHSDLCHFDIAVYVASGNVSGGVCDGCQHNTTGYNCEQCKPFFFQHPEKDVRDPNICQP
CSCDPLGTLNGGICDARTDIRLGLISGQCRCKVNVEGERCNRCKQAYYGLTDSSEGCKAC
TCSLLGTVPGGNPCDSETGNCFCKRLVVGKDCDLCVSEHWGLSNDMDGCRPCDCDLGGAI
NNQCDQLTGQCLCRDHMFGRRCDQVESGFYFVALDHYTYEAEDAKLGPGVLVVSRPYPQD
HHPTWTGIGLVNVPEGAFLEFTVDNIPHSMEYDILIRYEPQLPDQWEELLMTVMRPGPIR
ADSRCINTVPDDDHQMISLHPGSRHVALPRPVCFESGLNYTIRLSLPLYSALSDVQSPYT
LIDSIVLMPHCKNLDLFTTPEGESGGNSGWETFQRYRCMENSQSVLETPMTDICQNLIFS
ISALLHQGAKECQCNPQGSLSTVCNMSGGQCQCRPHVVGRNCDRCAPATFQFGPSGCKEC
NCDAQGSQSPLCDQLTGQCVCVSGAYGRQCNRCLPGYWGFPACRPCSCNGYAEDCDAHTG
QCLNCRDFSTGHNCDRCMDGYYGDLTLGSGDHCRPCMCPDGPGSLRQFAGSCFRGDNSQH
AVCICNTGYKGARCNECSPGYFGNPHEIGGSCQPCECNNNIDMLDPESCNAQTGECLRCL
YHSEGHACENCMIGYYGNALLQDCRKCVCNQLGSDSASCPSSGDCHCDRSSGQCHCLPRV
IGQHCDRCAPDTWNMASNKGCQACDCDTKHSYGTSCNEISGQCSCMPGFGGRTCRECREL
FWGDPEVKCHECDCEPSGVTQPQCNKDNGHCVCVEGVSGPRCDSCARGFSGTFPNCQRCH
QCFAEWDAVIGQLTNQTHRLANKVNAIKMSGVSGPYRKSIDSMERSVSDIHTILNQNPAS
QPLSEIQQLLEEANDLMGSLSQSLNHTEKILLNVQEEKSGMEGKLKLLMADAQKLEQTVQ
DIMDQIEFIRNSDVRGAAKTVTKYFLQSRVAEERANASTTDPDSPIENSAKLRKLTEEKM
NLTRDDFLRKHTEYAQRLDDLAGQIQTLDLTELSHKTCGNPAGQDSCSSPCGGLGCVNAE
GGPMCGGEACDGVLTKVQSSWQKTFESEQEILNAMEEVDKLAKMVSEAKQKADQAKMSAH
NVFMKTNRTKHNIDESNEELRTLIQEIRDFLTEDGADLESIEKVANEVLAMQMPTTREQL
QNLTDEIRKMVGELGNVETILQQSNDDSERAENLLKQARQASQGAAAVKESAEMVKQVLE
EAQRAQTAASSAMQQATDDIKNTNKLLFSVKSGTSDVEIKLGNATRRLQQLDEDVTLLRD
QTLNATLSSQHTIQDAMSIRQIVKEVKRGIDSEIKDKYSTVEQRIAQKGSGVAEAKKRAE
LLQQEAKELLLQASDKLQILKELEKSFEENHRALELKAEQLVALEASVKELLQQISHKVT
VYSSCLF
NT seq 5424 nt   +upstreamnt  +downstreamnt
atgttgagtcttctcatccgtgtgacgacgaagatgctacgcgttcaactcgtgctgctt
cttggtctgttggtgttcaccttggcccagcaagttaggcctgtggttggccaagaccag
gatcacatcagtgtaccggagctcagtgatgtctgcactgagggcagctgttacccagca
acgggagatcttctgattggtcgagcgcaccagctttcatccacctccacctgtggacta
acccgtcccgaacccttctgcattgtcagccatctgcaggaggaaaaaaaatgtttcatg
tgtgactcagtagcgccctacagtgaaccagacaatcagacgggaagccatcgtattgag
aatgttgtgaccacctttgctccgaacagactgaagacatggtggcaatctgagaacggt
gtggaaaatgtcacaatccagctgaatctggaagcagagtttcacttcactcacctcatc
atgaccttcaaaacatttcgacccgctgcaatggtcattgagcgctcagcagactttggg
aaaacgtggaatgtgtaccgctactttgcctatgactgtgaaacgtccttccctgacgtt
tctgtgggtcccatgaagaaggttgatgacgtcatctgtgactcacgctattccgacatt
gaaccatcaactgaaggagaagtgattttccgagtcttggaccccgcttttcggatccat
gacccatatagctctcgaatccagaatatgcttaagatcacaaatctaagggtgaagttc
accaaacttcacacgcttggggacaacctgcttgactcacgtatggagattaaagagaag
tattactatgcagtctatgacatggtggttcgaggaaactgcttctgctatggacatgcg
tcagagtgtgccccagtccaggaaactggctctgttcgggaaggcaaagttcacggtcac
tgcatgtgtaatcataataccaaaggactcaactgtgaacagtgtcaagatttctatcat
gacctaccttggagaccagctgagggacgcaataccaacgcctgcaagaagtgcaactgc
aaccagcactcagatttatgtcactttgacatagccgtctatgtggcctctggaaatgta
agtggcggtgtgtgcgatggctgtcaacacaatacaaccggatacaactgtgagcagtgc
aaaccgttcttcttccaacaccctgagaaagatgttagagatccaaacatctgccaacca
tgcagttgtgacccgttgggcacgctgaatggaggaatctgtgatgctaggacagacatt
cgactcggactcatttctggccaatgccgctgcaaagtcaatgtggagggagaacgctgc
aaccgctgcaagcaggcatattacgggctcacggattcctccgaaggctgcaaagcctgc
acttgcagccttctgggaacagttcctggcggaaatccttgcgacagcgagactggaaac
tgcttctgtaaacgattagtcgttggcaaggactgtgacctctgtgtgtctgaacactgg
ggtctcagcaatgatatggatggctgcagaccatgtgactgtgacttggggggagcaatc
aataaccaatgcgatcagctgactggtcagtgcctctgcagagatcacatgttcgggcgt
cgctgtgatcaagttgagtcgggattctacttcgttgctcttgaccactacacctacgag
gcagaggatgccaaattagggcctggcgtattggtggtttcaaggccctacccacaggac
caccatcccacttggacaggtatcggcttggtcaatgtccccgagggagccttccttgaa
ttcacggttgacaacattcctcactccatggagtacgacattctcatccgctatgagcct
cagctgcctgaccaatgggaggaacttctgatgacagtgatgagaccaggacctatcaga
gcagatagtcgttgtataaatactgtgccagatgacgaccaccaaatgatttcgctccac
cctgggtcacgacatgtggctcttcccagaccggtttgttttgaatctggtctgaactat
accattcgcctcagtctgccattgtattcagccctcagtgatgtgcagtctccgtacacg
ctcattgattcgatcgtgctgatgcctcactgcaagaacttggacctctttacaacccca
gaaggggaatctggtggaaacagtggatgggaaacttttcaacgatatcgttgtatggag
aatagccagagtgttctcgagacaccgatgactgacatttgccaaaacttaatcttcagc
atttctgctctgctccatcagggagccaaagaatgccagtgtaacccccaaggctctctg
agtacagtctgcaacatgagtggaggtcagtgtcagtgtcgacctcatgtcgtcggtaga
aactgtgacagatgtgctccagctactttccagtttggaccaagtggctgcaaagaatgc
aactgtgacgctcagggctcacagagtcctctttgcgatcagctcactggtcagtgtgtg
tgtgtttcgggagcatacggacgtcagtgtaatcgctgtttaccgggctactggggcttc
cctgcgtgtcgtccctgctcttgcaatgggtacgcagaagactgcgacgctcacacggga
cagtgcctcaactgtagggacttcagcacaggccacaactgtgacaggtgcatggatggt
tactatggcgacctgactctgggctctggtgaccactgtcgcccctgcatgtgccctgat
ggtcccggtagcctgcggcagtttgcaggaagttgtttccgtggtgataattcccaacac
gctgtctgtatctgtaacactggatacaaaggtgctcgctgcaatgagtgctcccctggt
tactttggaaacccacatgagattgggggctcgtgccaaccctgtgagtgcaacaacaat
atcgatatgttggatccggaatcctgtaacgcccaaactggcgaatgcctgcgctgtctt
tatcacagcgaagggcatgcctgcgaaaattgcatgatcggttattatggcaatgcacta
ctgcaagactgcaggaagtgtgtttgtaaccagcttggtagtgatagtgccagctgtcct
tcatcaggtgactgtcactgtgaccgcagcagtggtcagtgtcattgtctccctcgtgtg
attggccagcactgcgaccgttgtgcacctgacacctggaacatggctagcaataagggc
tgtcaagcctgcgactgcgacaccaaacattcatatgggacctcgtgcaatgagatcagt
ggtcaatgttcgtgtatgcccggctttggaggcaggacatgcagagaatgtcgagagctc
ttctggggagacccagaggtcaaatgtcatgaatgcgattgtgaaccttctggtgtcact
cagccgcagtgcaacaaagacaacggtcactgcgtttgtgtagaaggagtatctggtcca
cgttgtgacagctgtgcccgtggcttctctggtacctttcccaactgccaacgctgccac
caatgcttcgcggagtgggatgctgtcatcggacaattaacaaatcagacgcaccgcctt
gcaaacaaggtcaacgctatcaaaatgagtggagtcagcgggccctacagaaagtcaata
gacagtatggaaagaagtgtatctgacatccacaccatcctgaaccaaaacccagcctca
caacctctaagcgagatccaacagctcttagaggaggccaatgacttgatggggtctttg
agtcaatcactgaaccacacggaaaagattctactcaatgtgcaagaagagaaaagcggc
atggagggcaaattaaaattgctgatggcagatgctcagaaactcgagcagaccgttcag
gacattatggatcaaattgagttcatcaggaactccgatgtccgaggggcagccaagact
gtcactaagtacttcctgcagtctcgggtagctgaagaacgagcaaatgcatccaccact
gaccccgacagccctattgagaattctgctaagctacgcaaactcacagaagagaagatg
aacctaaccagagatgacttcctcaggaaacacactgagtatgcacaaagactagacgac
ctggccggtcaaatccagactctggacctgacagagctcagccacaagacatgcggcaat
ccagcaggccaggactcatgttcctctccctgtgggggattaggatgtgtaaatgcagag
ggtggccccatgtgtggaggggaagcatgtgatggtgtgttgacaaaggttcagtccagc
tggcagaaaacatttgagtccgaacaggaaatattaaatgccatggaggaagtggacaaa
cttgccaaaatggtgtctgaggcaaaacaaaaagcagatcaagcaaaaatgagtgcgcac
aacgtttttatgaagactaataggactaaacacaatattgatgagagcaacgaggagcta
cggacccttattcaagaaattcgagacttcctcacagaggatggggcagacttggagagt
atcgaaaaagttgcaaatgaggtgctggccatgcagatgccaaccacgcgtgagcagctt
cagaacctcacagatgaaattcgcaaaatggtgggagagctgggcaatgtggagactatc
ctgcagcagagcaatgatgacagtgagagagctgaaaatctactgaaacaggccaggcaa
gctagtcagggtgcagctgctgtgaaggaatccgctgagatggtcaaacaagtgctggaa
gaagctcagagagctcagacagctgccagcagtgccatgcagcaggccacggacgatatc
aagaacaccaacaagctgctgttctcagtgaagtccggcacatcagatgtggaaataaaa
ttgggcaatgccactaggcggctgcagcagcttgatgaggatgtgacactactgagagac
caaactctgaatgccacactgagcagtcaacataccattcaggatgcaatgagcatcaga
caaatagtcaaagaggtgaaaaggggcatcgactctgaaattaaggacaaatactccact
gtcgagcaacggattgcgcaaaaagggagcggtgtggctgaggcaaagaagagggcagag
ttattgcagcaagaagccaaggagctcctgttgcaagccagtgacaagctgcagattctc
aaagagctcgaaaagtcatttgaggaaaaccatcgtgcactggagttgaaggcagaacaa
ctggtggcgctggaggcctcagttaaggagctgctgcagcagatcagccacaaagttaca
gtttatagctcctgtttattctaa

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