Hippocampus comes (tiger tail seahorse): 109513057
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Entry
109513057 CDS
T04969
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04510
Focal adhesion
hcq04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109513057
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109513057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
DUF6415
Motif
Other DBs
NCBI-GeneID:
109513057
NCBI-ProteinID:
XP_019720819
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MLSLLIRVTTKMLRVQLVLLLGLLVFTLAQQVRPVVGQDQDHISVPELSDVCTEGSCYPA
TGDLLIGRAHQLSSTSTCGLTRPEPFCIVSHLQEEKKCFMCDSVAPYSEPDNQTGSHRIE
NVVTTFAPNRLKTWWQSENGVENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFG
KTWNVYRYFAYDCETSFPDVSVGPMKKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIH
DPYSSRIQNMLKITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHA
SECAPVQETGSVREGKVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNC
NQHSDLCHFDIAVYVASGNVSGGVCDGCQHNTTGYNCEQCKPFFFQHPEKDVRDPNICQP
CSCDPLGTLNGGICDARTDIRLGLISGQCRCKVNVEGERCNRCKQAYYGLTDSSEGCKAC
TCSLLGTVPGGNPCDSETGNCFCKRLVVGKDCDLCVSEHWGLSNDMDGCRPCDCDLGGAI
NNQCDQLTGQCLCRDHMFGRRCDQVESGFYFVALDHYTYEAEDAKLGPGVLVVSRPYPQD
HHPTWTGIGLVNVPEGAFLEFTVDNIPHSMEYDILIRYEPQLPDQWEELLMTVMRPGPIR
ADSRCINTVPDDDHQMISLHPGSRHVALPRPVCFESGLNYTIRLSLPLYSALSDVQSPYT
LIDSIVLMPHCKNLDLFTTPEGESGGNSGWETFQRYRCMENSQSVLETPMTDICQNLIFS
ISALLHQGAKECQCNPQGSLSTVCNMSGGQCQCRPHVVGRNCDRCAPATFQFGPSGCKEC
NCDAQGSQSPLCDQLTGQCVCVSGAYGRQCNRCLPGYWGFPACRPCSCNGYAEDCDAHTG
QCLNCRDFSTGHNCDRCMDGYYGDLTLGSGDHCRPCMCPDGPGSLRQFAGSCFRGDNSQH
AVCICNTGYKGARCNECSPGYFGNPHEIGGSCQPCECNNNIDMLDPESCNAQTGECLRCL
YHSEGHACENCMIGYYGNALLQDCRKCVCNQLGSDSASCPSSGDCHCDRSSGQCHCLPRV
IGQHCDRCAPDTWNMASNKGCQACDCDTKHSYGTSCNEISGQCSCMPGFGGRTCRECREL
FWGDPEVKCHECDCEPSGVTQPQCNKDNGHCVCVEGVSGPRCDSCARGFSGTFPNCQRCH
QCFAEWDAVIGQLTNQTHRLANKVNAIKMSGVSGPYRKSIDSMERSVSDIHTILNQNPAS
QPLSEIQQLLEEANDLMGSLSQSLNHTEKILLNVQEEKSGMEGKLKLLMADAQKLEQTVQ
DIMDQIEFIRNSDVRGAAKTVTKYFLQSRVAEERANASTTDPDSPIENSAKLRKLTEEKM
NLTRDDFLRKHTEYAQRLDDLAGQIQTLDLTELSHKTCGNPAGQDSCSSPCGGLGCVNAE
GGPMCGGEACDGVLTKVQSSWQKTFESEQEILNAMEEVDKLAKMVSEAKQKADQAKMSAH
NVFMKTNRTKHNIDESNEELRTLIQEIRDFLTEDGADLESIEKVANEVLAMQMPTTREQL
QNLTDEIRKMVGELGNVETILQQSNDDSERAENLLKQARQASQGAAAVKESAEMVKQVLE
EAQRAQTAASSAMQQATDDIKNTNKLLFSVKSGTSDVEIKLGNATRRLQQLDEDVTLLRD
QTLNATLSSQHTIQDAMSIRQIVKEVKRGIDSEIKDKYSTVEQRIAQKGSGVAEAKKRAE
LLQQEAKELLLQASDKLQILKELEKSFEENHRALELKAEQLVALEASVKELLQQISHKVT
VYSSCLF
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtcttctcatccgtgtgacgacgaagatgctacgcgttcaactcgtgctgctt
cttggtctgttggtgttcaccttggcccagcaagttaggcctgtggttggccaagaccag
gatcacatcagtgtaccggagctcagtgatgtctgcactgagggcagctgttacccagca
acgggagatcttctgattggtcgagcgcaccagctttcatccacctccacctgtggacta
acccgtcccgaacccttctgcattgtcagccatctgcaggaggaaaaaaaatgtttcatg
tgtgactcagtagcgccctacagtgaaccagacaatcagacgggaagccatcgtattgag
aatgttgtgaccacctttgctccgaacagactgaagacatggtggcaatctgagaacggt
gtggaaaatgtcacaatccagctgaatctggaagcagagtttcacttcactcacctcatc
atgaccttcaaaacatttcgacccgctgcaatggtcattgagcgctcagcagactttggg
aaaacgtggaatgtgtaccgctactttgcctatgactgtgaaacgtccttccctgacgtt
tctgtgggtcccatgaagaaggttgatgacgtcatctgtgactcacgctattccgacatt
gaaccatcaactgaaggagaagtgattttccgagtcttggaccccgcttttcggatccat
gacccatatagctctcgaatccagaatatgcttaagatcacaaatctaagggtgaagttc
accaaacttcacacgcttggggacaacctgcttgactcacgtatggagattaaagagaag
tattactatgcagtctatgacatggtggttcgaggaaactgcttctgctatggacatgcg
tcagagtgtgccccagtccaggaaactggctctgttcgggaaggcaaagttcacggtcac
tgcatgtgtaatcataataccaaaggactcaactgtgaacagtgtcaagatttctatcat
gacctaccttggagaccagctgagggacgcaataccaacgcctgcaagaagtgcaactgc
aaccagcactcagatttatgtcactttgacatagccgtctatgtggcctctggaaatgta
agtggcggtgtgtgcgatggctgtcaacacaatacaaccggatacaactgtgagcagtgc
aaaccgttcttcttccaacaccctgagaaagatgttagagatccaaacatctgccaacca
tgcagttgtgacccgttgggcacgctgaatggaggaatctgtgatgctaggacagacatt
cgactcggactcatttctggccaatgccgctgcaaagtcaatgtggagggagaacgctgc
aaccgctgcaagcaggcatattacgggctcacggattcctccgaaggctgcaaagcctgc
acttgcagccttctgggaacagttcctggcggaaatccttgcgacagcgagactggaaac
tgcttctgtaaacgattagtcgttggcaaggactgtgacctctgtgtgtctgaacactgg
ggtctcagcaatgatatggatggctgcagaccatgtgactgtgacttggggggagcaatc
aataaccaatgcgatcagctgactggtcagtgcctctgcagagatcacatgttcgggcgt
cgctgtgatcaagttgagtcgggattctacttcgttgctcttgaccactacacctacgag
gcagaggatgccaaattagggcctggcgtattggtggtttcaaggccctacccacaggac
caccatcccacttggacaggtatcggcttggtcaatgtccccgagggagccttccttgaa
ttcacggttgacaacattcctcactccatggagtacgacattctcatccgctatgagcct
cagctgcctgaccaatgggaggaacttctgatgacagtgatgagaccaggacctatcaga
gcagatagtcgttgtataaatactgtgccagatgacgaccaccaaatgatttcgctccac
cctgggtcacgacatgtggctcttcccagaccggtttgttttgaatctggtctgaactat
accattcgcctcagtctgccattgtattcagccctcagtgatgtgcagtctccgtacacg
ctcattgattcgatcgtgctgatgcctcactgcaagaacttggacctctttacaacccca
gaaggggaatctggtggaaacagtggatgggaaacttttcaacgatatcgttgtatggag
aatagccagagtgttctcgagacaccgatgactgacatttgccaaaacttaatcttcagc
atttctgctctgctccatcagggagccaaagaatgccagtgtaacccccaaggctctctg
agtacagtctgcaacatgagtggaggtcagtgtcagtgtcgacctcatgtcgtcggtaga
aactgtgacagatgtgctccagctactttccagtttggaccaagtggctgcaaagaatgc
aactgtgacgctcagggctcacagagtcctctttgcgatcagctcactggtcagtgtgtg
tgtgtttcgggagcatacggacgtcagtgtaatcgctgtttaccgggctactggggcttc
cctgcgtgtcgtccctgctcttgcaatgggtacgcagaagactgcgacgctcacacggga
cagtgcctcaactgtagggacttcagcacaggccacaactgtgacaggtgcatggatggt
tactatggcgacctgactctgggctctggtgaccactgtcgcccctgcatgtgccctgat
ggtcccggtagcctgcggcagtttgcaggaagttgtttccgtggtgataattcccaacac
gctgtctgtatctgtaacactggatacaaaggtgctcgctgcaatgagtgctcccctggt
tactttggaaacccacatgagattgggggctcgtgccaaccctgtgagtgcaacaacaat
atcgatatgttggatccggaatcctgtaacgcccaaactggcgaatgcctgcgctgtctt
tatcacagcgaagggcatgcctgcgaaaattgcatgatcggttattatggcaatgcacta
ctgcaagactgcaggaagtgtgtttgtaaccagcttggtagtgatagtgccagctgtcct
tcatcaggtgactgtcactgtgaccgcagcagtggtcagtgtcattgtctccctcgtgtg
attggccagcactgcgaccgttgtgcacctgacacctggaacatggctagcaataagggc
tgtcaagcctgcgactgcgacaccaaacattcatatgggacctcgtgcaatgagatcagt
ggtcaatgttcgtgtatgcccggctttggaggcaggacatgcagagaatgtcgagagctc
ttctggggagacccagaggtcaaatgtcatgaatgcgattgtgaaccttctggtgtcact
cagccgcagtgcaacaaagacaacggtcactgcgtttgtgtagaaggagtatctggtcca
cgttgtgacagctgtgcccgtggcttctctggtacctttcccaactgccaacgctgccac
caatgcttcgcggagtgggatgctgtcatcggacaattaacaaatcagacgcaccgcctt
gcaaacaaggtcaacgctatcaaaatgagtggagtcagcgggccctacagaaagtcaata
gacagtatggaaagaagtgtatctgacatccacaccatcctgaaccaaaacccagcctca
caacctctaagcgagatccaacagctcttagaggaggccaatgacttgatggggtctttg
agtcaatcactgaaccacacggaaaagattctactcaatgtgcaagaagagaaaagcggc
atggagggcaaattaaaattgctgatggcagatgctcagaaactcgagcagaccgttcag
gacattatggatcaaattgagttcatcaggaactccgatgtccgaggggcagccaagact
gtcactaagtacttcctgcagtctcgggtagctgaagaacgagcaaatgcatccaccact
gaccccgacagccctattgagaattctgctaagctacgcaaactcacagaagagaagatg
aacctaaccagagatgacttcctcaggaaacacactgagtatgcacaaagactagacgac
ctggccggtcaaatccagactctggacctgacagagctcagccacaagacatgcggcaat
ccagcaggccaggactcatgttcctctccctgtgggggattaggatgtgtaaatgcagag
ggtggccccatgtgtggaggggaagcatgtgatggtgtgttgacaaaggttcagtccagc
tggcagaaaacatttgagtccgaacaggaaatattaaatgccatggaggaagtggacaaa
cttgccaaaatggtgtctgaggcaaaacaaaaagcagatcaagcaaaaatgagtgcgcac
aacgtttttatgaagactaataggactaaacacaatattgatgagagcaacgaggagcta
cggacccttattcaagaaattcgagacttcctcacagaggatggggcagacttggagagt
atcgaaaaagttgcaaatgaggtgctggccatgcagatgccaaccacgcgtgagcagctt
cagaacctcacagatgaaattcgcaaaatggtgggagagctgggcaatgtggagactatc
ctgcagcagagcaatgatgacagtgagagagctgaaaatctactgaaacaggccaggcaa
gctagtcagggtgcagctgctgtgaaggaatccgctgagatggtcaaacaagtgctggaa
gaagctcagagagctcagacagctgccagcagtgccatgcagcaggccacggacgatatc
aagaacaccaacaagctgctgttctcagtgaagtccggcacatcagatgtggaaataaaa
ttgggcaatgccactaggcggctgcagcagcttgatgaggatgtgacactactgagagac
caaactctgaatgccacactgagcagtcaacataccattcaggatgcaatgagcatcaga
caaatagtcaaagaggtgaaaaggggcatcgactctgaaattaaggacaaatactccact
gtcgagcaacggattgcgcaaaaagggagcggtgtggctgaggcaaagaagagggcagag
ttattgcagcaagaagccaaggagctcctgttgcaagccagtgacaagctgcagattctc
aaagagctcgaaaagtcatttgaggaaaaccatcgtgcactggagttgaaggcagaacaa
ctggtggcgctggaggcctcagttaaggagctgctgcagcagatcagccacaaagttaca
gtttatagctcctgtttattctaa
DBGET
integrated database retrieval system