Hippocampus comes (tiger tail seahorse): 109513254
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Entry
109513254 CDS
T04969
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04140
Autophagy - animal
hcq04148
Efferocytosis
hcq05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109513254 (vps18)
04148 Efferocytosis
109513254 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109513254 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109513254 (vps18)
Membrane trafficking [BR:
hcq04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109513254 (vps18)
Hops complex
109513254 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
Vps39_2
zf-RING_16
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
zf-ANAPC11
KNOX2
zf-rbx1
DUF1664
DUF5600
zf-RING_2
Apolipoprotein
DUF4446
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
109513254
NCBI-ProteinID:
XP_019721117
UniProt:
A0A3Q2YIG6
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNSRQNAQQHGRLASANIGITHSGFVNVRLEEEKPIFNKQRIDFTPPER
INHLAVCNNQLCMSLGKDTLLRIDLAKPDHPNQIDLGRKDDSKVHKLFLDPTGSHLVISL
STSECLYLNRNTQKVRSLSRWRGHLVESIGWNKLLGNETSTGPILVGTGQGVIFEAEISA
TEGSLFNTNPDQYFRQVHSLEEDGSPAPVCCLEVERGLENKYFIIATTRKRLFQFAGKVA
EGTEQQGFSSIFIQNQDLLPSFQEFPVNMGYSEITFYTSKLRTSPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWEYTTDIDLSLNKPISIVLTQFHFLLLLHDRVKAICTLNGQVVHE
DVFPDKFGPLKRMIKDPSGGLVWIYTERAVFRYHIQRESRDVWQMYMNMNKFDLAKEYCR
ERPECMDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLIKK
LTNLKPNERTQITLLVTWLAELYLNRLGQLEDDDGKAGVLFRETRDEFRHFLNTSKHREC
LFNNRGTIYDLLASHGNVDDMVYFSVVMQDYERVVSHYCQHDDYCAALDVLAKHRDEKLF
YKFSPVLMQHIPERVVDAWIQMGKRLDPKQLIPALMNYSHKGSSQQINETVRYMEFCVHE
LHVTEEAIHNYLLSLYAKYKPDSLLRYLEEAGTYASEIHYDLKYALRLCAEHGYLRACVL
VYRIMELYEEAVDLALQVDVDLAKSCADLPDDDEELRKKLWLKIARHVVQEEKDVKKAMN
CLSSCDLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNKHIEELKQEMEEATESAKRIRE
DIQEMRNKYGVVDSQDKCSACDFPLLNRPFYLFLCGHMFHSDCLLQEVTPHLSAYKLSRL
DELQKKLSASTQASKSRHRPTPNEEGDATSLGKGGASREQMKSDLDDMVASECVYCGELM
IRSVDKPFIDPKKFEEEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatattggacgagtacgaggattcgcaaaacagcaggcaaaacgcgcagcag
catggtcgcctggcaagcgccaacatcgggataacacactcaggcttcgtcaatgtgcga
ctcgaagaggaaaagcctattttcaacaagcagaggatcgattttacaccgcccgagagg
ataaatcacctagcagtctgcaacaatcaactatgcatgagtctggggaaggacaccctg
ctgaggattgatttggctaaacctgatcaccccaatcagattgatcttggaaggaaagat
gacagcaaagtgcacaaacttttcctggacccgacaggctcccacttggtgatcagcttg
agcaccagtgagtgtctgtacctgaacaggaatacgcaaaaggttcgcagtctgtctcgc
tggcggggccacctcgtggagagcattggctggaacaagctgctaggcaatgagaccagc
acggggccaatcttggtgggcactggccaaggtgtcatcttcgaggccgagatctctgcc
accgaggggagcctctttaacaccaacccggaccagtacttcagacaagtccactccctg
gaggaagacgggagtccggcacctgtgtgctgcctggaggtggagcgcggcctggagaac
aagtatttcatcattgccaccacccgcaagcgcctcttccagtttgcgggcaaggtggct
gaggggacggagcagcagggcttcagctcgatcttcatccagaaccaggacctgttgccc
agctttcaggagttcccggtcaacatgggctacagcgagatcaccttctacacctccaag
cttcgcacttcccccaaggcctttgcctggatgatgggcaacggggtgctctatgggcag
ctggattatgttaggcctgactcgctgttgagtgacgtgcaggtgtgggagtacacgacc
gacatcgacctgtccctcaacaagcccatctccattgtgctgacccagttccacttcctg
ctgttgctgcacgaccgggtcaaggcgatctgcacgctgaacggtcaggtggttcatgag
gacgtgttcccggacaagttcggccctctcaagagaatgatcaaggacccgtcgggcggc
ctggtgtggatctacacggagcgagccgtgttccgctaccacatccagcgcgagtcccgc
gacgtgtggcagatgtacatgaacatgaacaaattcgacctggccaaggagtactgccgc
gagcggcccgaatgcatggacatggtccttgccaaggaggccgagcactgcttccagaac
aagcgctacctggagagtgccaagtgctacgccctgacgcagaactactttgaggagatt
gcgctcaagtttattgaggccaagcaggaggaggcccttaaggaattcttgataaagaag
ctgaccaatctgaagccgaacgagaggacgcagatcaccttgctcgtcacctggctggcc
gagctctacttgaacaggctgggccagctggaggacgacgacggcaaggcgggcgtcctc
ttccgggagacccgcgacgagttccgccacttcctgaacacctccaagcaccgcgagtgc
ctgttcaacaaccgcggcaccatctacgacctgctggccagccacggcaacgtggatgac
atggtgtacttctcggtggtcatgcaggactacgagagggtggtgtcgcactactgccag
catgacgactactgcgccgctctggacgtacttgccaagcaccgcgacgagaaactcttc
tacaagttctccccggtgctcatgcagcacatccccgagagggtggtggacgcctggatc
caaatgggcaagcggctggaccccaagcagctcatcccggcgctgatgaactacagccac
aagggaagtagccagcagatcaacgagacggtgcgctatatggagttctgcgtgcacgag
ctgcacgtgacggaggaggccatccacaactacctgctgtcgctctacgccaagtacaag
cccgactcgctgctgcgctacttggaggaggcgggcacgtacgcctcggagatccactac
gacctgaagtacgcactcaggctgtgcgccgaacatggctacctgcgcgcctgtgtgctg
gtgtacaggattatggagctgtacgaggaggcggtggatctcgctttgcaagtggatgtg
gatttggctaagagctgcgcggacctgcccgacgatgatgaagagctgcggaagaagctg
tggctgaagatcgcccgccatgtggtgcaggaggagaaggatgtgaaaaaggccatgaac
tgcttgtccagctgtgacctgctcaagattgaggacatcctgcctttctttcccgacttt
gtcaccattgaccactttaaggaggccatctgcagctccctggaggagtacaacaagcac
atcgaggagctgaagcaggaaatggaggaggccactgagagtgccaaacgcatccgagag
gacatccaggaaatgcgcaacaagtacggcgtggtggactcccaggacaagtgttcggct
tgcgactttccattgctcaacaggcctttttatttgttcctgtgtggacacatgttccac
tctgactgcctcctgcaggaagtgacgcctcacctgtctgcctacaagttgagtcgtttg
gacgagctgcagaagaaactctcagcctccacgcaggcgtccaagtcgcgacaccggcct
acgcctaatgaggagggtgacgcgactagcctcgggaagggaggcgccagtcgcgagcag
atgaaatccgacctggacgacatggtggcttccgaatgtgtgtactgcggcgaactgatg
attaggtctgtggacaaacccttcatcgatccgaagaagttcgaggaggaaaaatccagc
tggctgtga
DBGET
integrated database retrieval system
