Hippocampus comes (tiger tail seahorse): 109513544
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Entry
109513544 CDS
T04969
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109513544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109513544
03036 Chromosome and associated proteins [BR:
hcq03036
]
109513544
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109513544
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109513544
PBAF complex
109513544
GBAF(ncBAF) complex
109513544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
DUF919
Motif
Other DBs
NCBI-GeneID:
109513544
NCBI-ProteinID:
XP_019721621
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MSGATNVEFPGTGQTSSGFAAHRKKDSIPSAWFWESPDILAQLELVRQWIGKYYKKFVLV
DAPSCQALAAVTLQLLQFQEDAFGRRVPNPARNKLPTQCFMDLRPGGGLCHILGSAYKFK
SEQGWRRFDLQNPSRSERNVEMFDMIERTLLQQHCLSHPVVYLDPSLDQDLASRISVVVT
KHQGTVSMDRSLASHHIYPSLSSTDEEEWIRPVMRKQNYILVHWGMHPDSYDSWVPSSDV
NGDVQEPPQPEKPWRVHAGYVLDTDVFNEWMNEEDYCVNEGNVPVIFRQRIHIREDQDVK
STPFKKRRRSPSPLSSEARKKGKKGRRRGQQEEEPEEDLTKEMEDPTPVPNMEEITLPKI
VNFKKDSENTPVKGGIMADLDDQEDDFPGRDDEEGRMEIPRLLEGEENITEQTHHIIIPS
YTSWFNNNSIHSIEKRALPEFFNGKNKSKSPEVYLAYRNFMVDTYRLNPQEYLSSTSCRR
NLTGDVCSILRVHAFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPTGLAPLQHKP
LQVTSSQHMLCFPEKSREKPLDCQNFGLRMDVYAKKHPKTKGACAGREWTEQETLLLLEA
LEVYRDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQSENP
VMSTVAFLASVVDPRVASAAAKAALEEFSQVQEESLNEMTCNQLKSTDSTDASQVQMNSS
SHQVAVNADGLLVESIVPKVEGVKRENAEESDRIHIGNEDDGTQRQEGEGDEGRAAMELD
LVESTVTTAAAAALSSAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETI
MDREKEALEQQRQQLLTERQSFHTEQLKQAEMKLLQQREQQGQPGFTMQQHSGQSVANRI
TPSGGQMQAMGPRHPGASNGMYPSSQADGMTAAQPGLLASSHS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagcaacgaacgttgaatttccagggacaggtcagaccagctccgggttcgcc
gcccatcggaaaaaagacagcattccgtccgcttggttctgggagagtcctgacatatta
gctcagctggagctagtgcgccagtggatcgggaagtactacaaaaagtttgtgttggtg
gatgctccatcatgtcaggcactggctgctgtgacgctgcagctcctccagtttcaagag
gatgcgttcggcagacgagttccaaatcctgcccgcaacaaactccccacacagtgtttc
atggacttgcggccgggaggtggactgtgtcacatcctcggttcagcgtacaagttcaaa
tctgagcaaggctggcgaaggtttgacttgcaaaatccatcaaggagtgaaaggaatgtc
gaaatgtttgatatgattgaaagaacactattacagcaacactgtttgtcacatccggtt
gtttatctggacccttcgctggatcaggacctggccagcagaattagtgttgtcgttaca
aagcaccagggcacagttagtatggacagaagcctggcaagtcaccacatatatccatca
ctctcatccacagacgaagaggaatggattcggcctgtcatgcgaaaacaaaactatatc
ctggtgcattggggcatgcaccctgacagttatgacagctgggtgccctcgagtgatgtc
aatggagatgttcaggagcctcctcagccagagaaaccgtggagggtccacgctggttat
gttctggacacggacgttttcaatgagtggatgaacgaagaagactattgcgtgaatgaa
gggaacgtgcctgttatttttcgacagcgcatacacatacgagaagaccaggatgtcaag
tccacccccttcaaaaagagaagacgctctccttctcccttgtcctctgaagctaggaag
aaaggaaaaaagggacggcgacgtggacagcaggaggaggagccagaggaggacttgacc
aaagaaatggaggaccccacgcctgttccaaacatggaggagatcacattacccaagatt
gtcaactttaaaaaggacagtgagaatacgcctgtcaaaggagggatcatggccgatctg
gatgaccaagaagacgattttccgggaagggacgatgaggagggaagaatggagattcct
cgcctattagagggcgaggagaacatcactgaacaaacccatcacatcataataccaagt
tacacatcttggttcaataacaacagcatccactcaatcgagaagcgcgccctccctgaa
ttcttcaacggaaagaacaagtccaaatcaccggaagtctacctggcctaccgtaatttc
atggtcgacacgtaccggctgaacccccaggaatacctcagctcgacatcctgccggcgg
aatctcaccggggatgtttgttccattttgagggtgcatgcgtttttagaacagtggggt
ttgattaactaccaggtggacgcagagagcagaccactccccatgggacccccacccact
cctcattttaatgtcctggcagacacgcccactgggctggcccctttacaacacaaacca
ctgcaggtgacatcatcccagcacatgttgtgcttcccagagaagagcagagagaagcct
ttggattgccagaatttcggattgcgcatggatgtttacgccaagaaacacccaaagaca
aagggcgcttgtgcgggacgggagtggacagagcaagagacgcttttgttgttagaggcc
ttggaggtctacagggacgactggaataaagtgtccgagcacgtgggctcaagaacacag
gatgactgcatcctccatttcctccgtctgcccatagaggacccgtatctcgaggattcg
tccgcctccctcggcccgctggcgtaccagcccgttcccttcagccaatccgagaacccc
gtgatgagcacggtggccttcctggcctcggtggtggatccgcgggtggcgtcagccgcc
gctaaggctgcgctggaggaattttcacaagtccaggaagagtctttgaatgaaatgacg
tgcaaccaactgaaatcaactgactcaacggatgcttcacaagtccagatgaacagcagt
tcccatcaggttgccgtgaatgctgacgggctcctggttgaatccatagtgcccaaagtt
gaaggagtcaaaagagagaatgcagaggaaagcgacagaattcacatcggcaatgaggac
gacggcacgcagcgtcaggagggagaaggggatgaggggagagcggcgatggagctggat
cttgtcgagagcaccgttaccacggcagcagcggccgctttgtcctctgctgcaacaaag
gcgaagcacttggcagcagttgaggagagaaagatcaagtctctggtggctttgctggtg
gagacccaaatgaagaagcttgagatcaaactgagacactttgaagaattggagaccatc
atggaccgtgagaaagaggctttggagcagcagcggcaacagcttcttacagagagacag
tccttccatactgagcagctcaaacaggcggagatgaagcttctccagcagagggagcaa
cagggacagccaggattcacgatgcagcagcattccggtcagtccgtggccaaccggatc
accccgagtggaggacaaatgcaggcgatgggccctcgccaccccggagcatccaatggc
atgtatccgtcctcacaggccgatggcatgacagcagctcagcccggccttctggcatcg
agtcacagttga
DBGET
integrated database retrieval system
