Hippocampus comes (tiger tail seahorse): 109513977
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Entry
109513977 CDS
T04969
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109513977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109513977
03036 Chromosome and associated proteins [BR:
hcq03036
]
109513977
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109513977
Coactivators
SAGA/TFTC/STAGA complex
109513977
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109513977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
109513977
NCBI-ProteinID:
XP_019722309
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MAGASDPLEDMLSSEVDEKAVSDLVGSLESQLAGQSNSGGKTDESRGAGSVAPANHHLGK
TLPAPVGCTTLDQQQQGRRNKTDLHQDLNSTEKTVTPPFQSSTLSSGETAAAAASNSGSQ
SHGASITTLPASGVSTSPPASSISTAATPGGPTKASPDSDEPHADASKRRLASPRRSASA
RIKSLNGAAVTTRGNSSGSSPAAGGDDACDSPADCRPASTAAINTSTFTLANASLPAGQS
AIALDRGTPTIALHRLPSHIVAGIAQNGTSVSAMAQQGAQTPPVTSPPSASSYSSSSSSP
PAQANHSKIAPDPAEAPSECQSKSVTTSSVINTVSSVAVTTTPTSSSTTVAQPLTTTATT
TTTTTTTTIPAASVTTSCIGVQITSVTTTISTVRPTTAAPAIPAAPAIPTAPAIPAAASP
TMQTPTRPGLAAPQRIVAPQLIVRPPQQQTTIQLPPGFTIPSGMVLVRTELGQLVLVPQQ
ALAQAQAQAQAQAQGQAQAQNNISPRPATPTTGTSFRVSTPQSPATSQTTRQCALTPAKV
APSPSPAPSSPALQTTSSSSSSSSSSTSSFVTSCPALRPKGPVAPAVAVTAPQQTPVVST
PQALPAQAASQPPQTTGIAVTPGAPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSK
NVKALVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQP
PQQGIKPAVPIVSGPAVHVRPPNSVGATGTSVLPHGTMGHAAAAGMKTTGPVGGQVRMPV
MITQSMRAQGTMGKVGTFQAGRSTVGLAVQISGNQKNKLNDPGGGSFRDDDDINDVASMA
GVNLNEESARILATNSELVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVMEVPMEVVTF
ISHAAQSRLRTVVEKVSAIAQHRLDSCKDDECYEQSADVRSQLRFFEQLERMEKARKDEQ
EREILLKAAKSRSRQEDPEQARLKQKAKEREKATRLLACELHFCLCGVPSAPWEARATGE
LGPPKRRFWQGAGDAFQLRKGGCVHLANPPHGILTPHQLLSHLCFVVESQGVVTAGVHTG
EGRTRARQHRACVFPLDCHVGLIRERQHDSPC
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagatatgctctcttccgaggtggacgagaaggcg
gtgagtgacttggtgggctccctggagtctcagctggccggtcagagcaactcggggggc
aaaaccgacgagagccgaggcgctggctcagttgcccccgctaaccatcacttggggaaa
acgctaccagctccggtgggctgcacaacactagatcaacaacaacaagggcgccgtaat
aaaaccgacctgcaccaggatttaaactccacggaaaaaactgtcacacctcctttccag
agcagcaccctttcctccggtgagactgctgcagccgccgccagtaacagcgggtcgcaa
tcacatggcgcatccatcacaacactgcccgcgtccggcgtgtcaacttccccgccggcc
agcagcatcagcaccgccgctacccccggtggccccacgaaggcttccccggactcagat
gagcctcacgcggacgcttcaaaacgacgcctcgccagcccgcgacggagcgcctctgct
cggatcaagagtttgaacggtgccgccgtaaccacccgaggaaacagcagtggcagcagt
cccgcggcggggggcgacgacgcttgcgatagccccgcggactgccgaccggcgagcaca
gcagccatcaatacgtcgacgttcacccttgccaatgccagcctacctgcgggtcagtcg
gccatcgccttggaccggggcacccccacaatcgccttgcacagactacccagtcacatc
gtggccggcattgcccagaacgggaccagcgtgtcagcaatggcccagcaaggtgcccag
acgccccctgtcacctcgcccccatctgcctcctcttactcctcatcatcgtcctcgcca
cctgcacaggcgaaccacagtaaaatcgccccggaccccgcagaggctcccagcgaatgt
cagtccaaaagtgtcaccacgagctctgtcataaacactgtttcctccgttgccgtgaca
acaacacccacctccagctcgaccacagtagctcaacctttaaccacaactgctacgaca
accacgaccaccaccaccaccaccataccagctgcctcagtgacaacaagctgcattggc
gttcagattacatcagtgaccaccactatcagcacggtccgacccaccaccgccgccccc
gcgatccctgccgcccccgccatccccactgcccccgccatccccgctgcagcctcacca
accatgcagacccctacccggcccggtttggctgcacctcagaggatcgttgcaccccag
ctcattgtcagaccaccccagcagcagaccactattcagctgccacctgggttcaccatt
ccgtctggcatggtgctggtacggaccgagctgggccagctggtgttggttcctcagcag
gctttggctcaagctcaggcgcaggcacaagcgcaggcacagggtcaggcacaggcccag
aataacatctctccgcgacctgccactcccactaccgggacgtccttcagagtaagcact
ccacagtctccagcaacctctcagaccaccaggcagtgtgccctgaccccggccaaggtg
gcaccgtctccctctcctgctccttccagccctgccctccagaccacctcctcctcctcc
tcctcctcttcttcctctacttcttccttcgttacctcctgtcccgcactacgcccaaag
ggccccgtggcgccggccgtggcggtgacggctccgcagcagacccctgtggtttccaca
ccccaggccctgccggcccaggctgcctcacaacccccgcagacgacgggcatcgccgtg
acccctggagctcctgtcgtgtcccaggaaatgcaggaaaacgtgaaaaagtgtaaaaac
ttcctagccacgctcatcaagctggcatcacacaactccccgtcgcctgaaacctccaag
aacgtcaaagctcttgtgcaagacctgctggatgccaaaattgagccggaggagttcacg
agccggctgcagacggagctcaagtcgtcaccacagccttacctggtacccttccttaag
aagagcctcccggccctgcggctgtctttgcttaacagtcagcagtccttgacccagcca
ccgcagcagggcatcaaaccagcagtgcccattgtgagcgggccggccgtccacgtacgt
cccccgaacagcgtcggggccacgggtaccagcgtgctgccccatgggacgatgggccat
gcagccgccgcgggtatgaagaccacaggccccgtgggcggacaagtccgaatgcctgtg
atgatcacacagtccatgagagctcaaggcacaatggggaaggtgggcaccttccaagca
gggaggagtacggtgggcttggctgtccagatctccggcaaccaaaaaaacaagctcaac
gaccccggaggaggctctttcagggatgacgacgacatcaacgacgtggcctccatggcg
ggcgttaatctgaacgaggagagcgcccgcatcctcgccaccaactcggagctggtcggc
acgcagattcgctcgtgcaaggatgaagccttcctgcaccctgggctcctccaccgacgc
atcctggaaacagccaagaagtttggtgtcatggaggtgcccatggaggtcgtgacgttt
atatcgcacgccgcacagtcgcgacttcgcacagtcgttgaaaaggtttcggccatcgcg
cagcacagactggactcctgcaaggacgacgaatgctatgagcagtcggccgacgtgcgc
tctcagctgcgcttcttcgaacagctagagaggatggaaaaggcgaggaaggacgagcag
gagagagagatcctcttgaaagccgccaagagtcgctccaggcaagaggacccagagcaa
gctcgactgaaacagaaagccaaggagagggagaaagcgacacgtctcctcgcctgtgag
cttcacttttgtctttgcggcgttccaagcgctccttgggaagcgcgagcgacgggggaa
ttgggcccacccaagcgacgcttttggcaaggtgccggggatgcgtttcaattaagaaaa
gggggctgcgttcaccttgcaaatcccccccacggaattctgaccccacaccaactcttg
tcccatctttgctttgtggttgaatcccaaggtgtcgtcactgcgggcgtccatacgggg
gaaggaaggacaagagcgcgccagcatcgggcctgcgtgtttccattagattgtcatgtt
gggctaattagagagcggcaacatgattcaccttgttaa
DBGET
integrated database retrieval system
