Hippocampus comes (tiger tail seahorse): 109513983
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Entry
109513983 CDS
T04969
Symbol
lrrc49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcq03037
]
109513983 (lrrc49)
04812 Cytoskeleton proteins [BR:
hcq04812
]
109513983 (lrrc49)
Cilium and associated proteins [BR:
hcq03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
109513983 (lrrc49)
Cytoskeleton proteins [BR:
hcq04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
109513983 (lrrc49)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
109513983
NCBI-ProteinID:
XP_019722320
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MSAFVSLASRGSSESSGETLGVSNNGSDKSNILCAIFIYFFASIGRLPAKGRWLRGASKT
LDKEMESGRTRKHRNDNDNLVFLTPMVNSCKLRPKVAKVLPGRGQRMVNSYDPFKDTGLN
FTARSPPYPDSPSFHLESSLRAANCSLPSVPFVTNEVRDKSHRPTHSAGARYYGTAPHPN
SAGGSGAYHINVTSGFPIIHFHWHDAASGLHRIDMDKRCLHECPQLGVMDDLQVLNLQHN
LITGISQLSLLRHLVVLNLDDNHITDMSGIQALTSLRILTLATNRIHQISCLDNLAKLHI
LDLHHNQISKMENLSHLTELQVLNLAGNNISRVENLLGLDSLMELNLRHNYISFVAEVDL
LPRLRRLFLSCNNISSLHQLGCCGESLSLSELTLDGNPVALETWYKQAVLRCVLHLRQLD
MKRITDEDRRMAGVQARKEEEKKKESHKQTIHKEKRRLAIRNAAQQWEGVVAARLELPST
TTNGAREEVSPENSPAHCPTQTNGLAQEPSPDEPRRISPGFGPERVTGGPESRFRTNSRP
NSPRDPKLTEAGSVTSLSLSDNHLAELDGDTLRLFGLGALDVLERGWGAQTASAVTVIAF
RYIHFDAIVPMLPRIRVKFPNLAHLIFLETNISRLPQLAALAQVRRLDQLTIHQQGNPVV
GLALWRSFVIYRLHHFNLQRINSQEVTMNDVIAAERIFGTLGHVAATETPHCRLLLLLEE
SRKRQLQFLLEGRGRRAGLSPEELRDNGKLVGEGLSRALFNYPSRDGSTDSPQEGTTEAS
ERTATVDLYLQDLVRQASETNVKGEALHCLWPAMFAEMVRDCVLEMSDRAAFRQASLAKL
SK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttgtgtctctcgcttcccgtggaagttccgaatcgtcgggagaaaccttg
ggggtctccaacaacggcagtgataagtcaaacattttatgtgcaatttttatttatttt
ttcgcttccattgggaggttgccagcgaaaggtcgatggttgcgcggtgctagcaaaacg
ctggataaagaaatggagtcggggcgcacacggaaacacagaaacgacaatgataactta
gtctttctcacgcccatggttaacagctgcaagttgcgcccgaaggtggccaaagtactg
ccaggaagaggccagcgaatggtcaattcttatgatcctttcaaggacacaggtctcaat
tttaccgcaagaagtcctccttacccagattccccatctttccatctagagtcatcactt
cgcgccgctaactgcagtttgccctcagttccttttgtgacaaatgaggtccgagacaaa
tctcacaggccaactcatagtgccggggccaggtactacggcactgcccctcaccccaat
tcagcaggtggctctggggcatatcatatcaatgtcacctctggtttccccatcattcac
ttccactggcacgatgcagcatccggtcttcatcgaattgacatggacaagcgctgcctt
catgagtgtccgcagctgggcgtcatggacgacctgcaagtgctcaacttgcagcacaac
ctgatcaccggcatcagccagctgtcactcctgaggcacctcgtcgttctcaacttggac
gacaaccacatcaccgacatgagcggcatccaagcgctcacctccctcaggatactcact
ttggccacaaacaggatccatcaaatatcctgcctggacaacctagccaaactccacatc
ttggatttgcatcacaatcagatcagcaagatggagaacctgagccatctgacggagctg
caggtgttgaacctggctgggaacaacatctctcgagtggaaaacctccttggcctggac
tctttgatggagctcaacctgcgacacaactacatctcttttgtggccgaggtggacctt
ctgccccgcttacggcgcctctttctcagctgcaataatatcagcagtctccaccagcta
ggctgctgcggggagtcactctccctttccgagctcaccctggatgggaacccagtagcc
ctggagacatggtacaagcaggctgtcctgcgctgtgtgcttcacctcagacagctggac
atgaagcgcatcacggacgaggatcggcgcatggctggtgtgcaggctcggaaggaggag
gagaagaagaaggagagtcacaagcagaccattcataaggagaagcgccgtcttgccatc
cgtaatgcggcgcagcagtgggagggcgttgtcgccgcccgcttggagctgccgtcgaca
acaacaaacggcgccagagaagaagtcagcccggagaacagccccgcccactgcccgacg
cagaccaacggcctggctcaggaaccttcgccagatgagccacgacggatcagtccgggt
ttcggacctgaacgagtgactggtggacccgagagccgattccgcaccaacagccgtcca
aacagccctcgagatccaaaactcacagaagcaggaagtgtgacgagcctgtcgctgtcc
gacaatcatctggccgagctggacggcgacaccctgcgcttgttcggccttggcgccctg
gacgtgctggagagaggctggggggcacagacggccagcgccgttaccgtcatcgccttc
cgttacatccattttgacgccatcgtaccaatgctgcccaggatcagggtcaagtttccc
aatctggcgcatcttattttcctggaaaccaacatcagccgtctgccgcagttagctgca
ctggctcaggttcgccgtctggaccagctgaccatccaccagcagggtaacccggtggtg
ggcctcgccctgtggcgctccttcgtaatctaccgcctccaccactttaacctgcagaga
atcaacagccaggaggtcaccatgaatgacgtcattgctgccgagcgcatcttcggtacg
ctgggccatgtggcggccaccgagacaccgcattgccggctcctcttgctgctggaggag
tccaggaagcggcagctgcagttcctgttggaggggcgcggccggcgtgccgggctcagc
ccggaggagctgcgggacaacgggaagctggtgggtgaaggccttagccgagcgctgttc
aactaccccagccgggacggcagcacggacagcccgcaggagggcaccacagaggcgtcg
gagcgcaccgccactgtggacctctaccttcaggatctggtgcgccaggcatccgagacc
aatgtgaagggcgaggccctgcactgcctgtggcctgccatgttcgcagaaatggttcgc
gactgcgtgctggagatgagcgaccgagcggccttccgccaagccagccttgccaagctg
tccaagtga
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integrated database retrieval system
