Hippocampus comes (tiger tail seahorse): 109514337
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Entry
109514337 CDS
T04969
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04136
Autophagy - other
hcq04140
Autophagy - animal
hcq04145
Phagocytosis
hcq04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109514337 (atg16l1)
04140 Autophagy - animal
109514337 (atg16l1)
04136 Autophagy - other
109514337 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109514337 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109514337 (atg16l1)
03029 Mitochondrial biogenesis [BR:
hcq03029
]
109514337 (atg16l1)
Membrane trafficking [BR:
hcq04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
109514337 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
109514337 (atg16l1)
Mitochondrial biogenesis [BR:
hcq03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109514337 (atg16l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
ATG16
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_VPS8
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_NOL10_N
CFAP251_N
WD40_RFWD3
Beta-prop_ACSF4
Tricorn_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF12
KASH_CCD
PUMA_CC
CCDC93_CC
ADIP
DUF4200
CCDC146_CC_N
EXOC6_Sec15_N
HALZ
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
109514337
NCBI-ProteinID:
XP_019722896
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MAQPRGACTWKPHICEQLKLRDRLQRHGFEEIVHQYNRLLEKSDLQAVLSERYQADKYEV
ARGHEATAAGGDAPALQQEMADMRIRHQEELTELHKKRGELAQTVIELNNLIQQKDKEIQ
SNEAKMQEYQQQMANLEGDCRDLNNCLQDLERANQTLKDEYDALQITFSALEEKLRKTTE
DNQELVSRWMAEKAQEANRLNAENEKDSRRRQAKLQKELADAAKEPLPVDPDDDIEVLPE
DSGKSGGEQPHGRALGRTPSKKSSQMPPGGLLDSISNIFGRRRGANSLSASPENSEAPSG
ACVEVRVPSTALHVFEAHDGEVNAVRFSPGSRVLATGGMDRRVKLWEVASGRCEPKGALT
GSNAGITSIEFDSAGSYLLAASNDFASRIWTLEDYRLRHTLTGHSGKVLSARFLLDNARI
VSGSYDRTLKLWDLRSKVCMKTVFTGSSCNDIVCTEQCVMSGHFDKKVRFWDIRAESSVR
ELELLGRVTSLDLNHDRTELLTCSRDDLLKIVDLRTNAVRQTLSAEGFKCGADWTRVTFS
PDGNFVAGGSADGALYVWNVLTGKVDRTLDRNHNSAINAVSWSPSGVYVSSVEKGSKAIL
WSDM
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccacgcggcgcctgcacgtggaagccgcacatctgcgagcaactgaagctc
cgcgaccgtctgcagcgccacggcttcgaggagatcgtccatcagtacaatcgcctgctg
gagaaatcggacctgcaggccgtcctgtcggagcgctaccaggcggacaagtacgaagtc
gcacggggacacgaagccacggcggcgggcggcgacgcgccggcgctgcagcaggagatg
gccgacatgaggatccgccatcaggaggagctgacggagctgcacaagaaacgaggagag
ctggcccagaccgtcatcgagctcaacaacttgatccagcagaaggacaaggagatccag
agcaacgaggccaagatgcaggagtaccagcagcagatggccaacctggagggggactgt
cgagatctcaacaactgcctgcaggacctggagcgagccaaccagactctgaaggacgag
tacgacgccctgcagatcaccttcagcgctctggaggagaaactgagaaagaccacggag
gacaaccaggagctggtctcgcgctggatggccgagaaggctcaggaagccaaccggctc
aacgcggagaacgagaaggacagcagacgcaggcaggctaaactgcagaaggagctggcc
gacgccgccaaggagccgcttcccgtcgacccggacgacgacattgaagttctgccggag
gactccgggaagtcgggcggagagcagccgcacggccgagcgctcggcagaacgcccagt
aagaaaagctcccagatgccccctggcggtctgctggactccatctccaacatctttggc
agacgacgaggcgcaaattccttgagcgcgtctccggaaaacagcgaggcgccgtcgggg
gcctgcgtggaggttcgagtcccgtccacggcgctgcacgtttttgaagcgcacgacggc
gaggtgaacgccgtgcggttcagccccggctcgcgggtcttggcgacgggggggatggac
cgcagggtgaagctttgggaggtggcgtcaggtcgctgtgagccgaaaggagcgttgacc
ggcagtaacgccggaatcaccagcatcgaatttgacagtgcaggttcctacctgttggct
gcctccaatgactttgccagtcgcatttggactctggaggactacagactgaggcacacg
ctgaccggacacagcgggaaggttctgtcggcccgcttcctgttggacaacgctcgcatc
gtctcaggaagctacgaccgaaccctgaaactgtgggacctccgcagcaaagtctgcatg
aagacggtgttcaccggttccagctgcaacgacatcgtgtgcaccgagcagtgcgtcatg
agcggacactttgacaagaaggtccgcttctgggacatcagggcggagagcagcgtgcgg
gagctggaactgctgggccgggtgacgtcgttggacctgaaccacgaccgcaccgagctg
ctcacttgctcccgagacgacctgcttaagatcgtcgacctgcgcacgaacgccgtcaga
cagactctcagcgctgagggcttcaagtgcggcgccgattggaccagagtgaccttcagt
cccgacgggaactttgtggccgggggctctgcggacggagcgctgtacgtctggaatgtt
ctcacggggaaggtggaccgaacactggatcgcaatcacaactcagccatcaacgccgtg
tcgtggtcgccgtcgggcgtgtacgtgagcagcgtggagaagggcagcaaggccatcctg
tggtccgacatgtga
DBGET
integrated database retrieval system
