Hippocampus comes (tiger tail seahorse): 109514548
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Entry
109514548 CDS
T04969
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109514548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109514548
03021 Transcription machinery [BR:
hcq03021
]
109514548
03036 Chromosome and associated proteins [BR:
hcq03036
]
109514548
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Helix-turn-helix
ARID
109514548
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109514548
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109514548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
109514548
NCBI-ProteinID:
XP_019723296
LinkDB
All DBs
Position
Unknown
AA seq
2206 aa
AA seq
DB search
MAAQVASVASLNASPPSELKKPDRDSQEESAPGEKQPHQHENKEAGPDGGSPGRKELQDG
GDAAGGGGDPDMKNGNGNLPRVNNNSSNQNDSGGPEGNNHPGVGHHHTGPFPPPPYGYNQ
HYSRALIHQHGGQQSPGMAAAPGPGMMDPYPANSHEHGYPNHYNNYSPFQNRTSYQGQGY
GAMSSSRNNQPPAAGGQPGKQQPAAAGGGMAAAASYNNQRYNMGSQQPTSTPTLNQLLTS
PSLARSYPNYPQGDYNNQEGGTKAAGEMASAYGGVHPAWQHRAHHPPPMSPGNTAQAPSR
NQPASPMDQVGKMRGQPYGGAAPYSQQPQQQQQQQQQQQQGPSPGPGPQQTGSYPGQGYG
SPGPQRYPVGMQGRTPGAMGGMQYGQQMPAYGQQGPGGYGQQGQGYYSQHGGPPHPSQQQ
TPYGGQPQSGSGAPFPQQGHPSQPPGPHGQSGPPYSQSQGPHGPPAGQPPYGSPQQQPSQ
QQQQGPGPQTPQGSQGXXXXXXXXPQQQQPGSQPPQSQQPPSHGQQSQASPYSQTPPLPQ
QQQSPYQRFPPPPQELSQDSFSSQSSAPPSNQPMPSNKSSQEDSMQGRPSSLPDLSGSID
DLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVT
PSRTGPLSPAAVPGNQMPPRPPSVQSDSIMHSSMNQSTMGQDRVYMRNPQMPPYGSPGQP
GSALSPRQSSGGQMHSGMGPYPQNNSMGNYGPQGGQYGPQGYPRPPGYSGMPNSTYPSGP
GMGGAMNPMPGQGSGAPYGNMAPGGRVGSGQMGARPYGPGMGSNMGNMPPQVVSGMCPPP
GMNRKEGGPSMHHGPTNSIHNRPPGYVMSQGMMGSASPYGPAMNSMHGMMNQGGPGPYPM
GTNMGNNTPGMAPGSEFGMDKINQAQKMNNKVDGTPKTESKKKSSSSTITNEKITRLYEL
GPEPERKMWVDRYLAFAEEKAMGMNNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWR
ELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEEPPPDFFNTDTKKNQPKIQPPSP
AGSGSLQGPQTPQSTSSSMAEGGELKPPTPASTPHTQMPPMPGARSSVNLQDPFADGSDP
AFSRRNAMTPNSQNYQPGMGGPEMMGRMGPYESNKDPFGGMRKAGEQFLPPGPNSGMGEP
YSRGPPGPMGNLPMGQRQQYPYGYDRRQESGMAPDGSMGPGAAQPNMMPSGAEAGMYSPS
RPPPQQRHDSYANQYPGQGAPPGGPYPNQQPGMYAQQQPNYKRPVDGSYGPPAKRHEGEM
YNVPYSGQQPAGPQSSGPQGQQEMYNQYNAYPGGERRPPGPQNQFPFPFGRDRGSSSGGP
NSQSPMPPQMMASPMPSGPDGPQGPMWQGRNEMGYPNYHNRQGPPVPSQAPGYHGMNRSE
EMMSSDQRMNHEGPWPGHVNQRQPPFGPGGSGPPMTRPLPSTYQTSQNHIPQVSSPAPMP
RPMESRTSPSKSPYMHPGIKVQKAGPPVPASHIGQAPVQQPMMRRDVGFPPGSVECSQPH
LKPRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSSITTFNLCQLPGF
LELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPNAAEDSDDDMPMPEGEGVDTDEEED
EDDAPDDTRVQVQVKEEEEEVMEERSQKDEDDSKEKSRVKEPATSGSSQDPNAEKPRQAS
KFDRLPIKVVRKKNPFQGSWASKLGQRQSFESGLVHWSVGGGDITEHIQTHFESRVGRLK
ARKRLPKETRAGREVPELLPPAAGAPVTATIDDVLSARPGSVTEEAVRGGAEEQKENGKY
LFSINPELQSRRNVKILEDEPHSKDETPLSTLADWQDSLARRCVCVSNIVRSLSFVPGND
QEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEDEEDEGVSCERDEWWWDCLEVLRE
NCLVTLANISGQLDLSVYSESICLPLLDGLLHWAVCPSAEALDPFPTLGPHGSLSPQRLV
LETLSKLSIQDNNVDLILATPPFSRLEKLYGALVRLVGERKVAVCREMAVVLLANLAHGD
SLAARAIAVQKGSVGNLLGFLEDSLAATQYQQSQSTLLQMQAHFEPTSVDMMRRAARALH
ALARLEENHSEFTLYESRLLDVSVSPLMNSAVSQVICDVLFLVGQS
NT seq
6621 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgtcgcctctctcaacgcaagcccgccgtccgaactcaaa
aagccggatcgggactcgcaggaggagtctgcaccgggggagaagcagccgcatcagcat
gagaacaaggaagcggggcccgacggcggctctcccggccgaaaggaactgcaggacggc
ggcgacgctgccgggggaggaggggatcctgacatgaagaacggcaacgggaatttgccc
agggtaaataataatagcagtaatcagaacgattccggcgggcctgaaggaaataaccat
cccggtgtgggacaccaccacacgggccccttcccaccacctccttacgggtacaaccag
cactacagccgggcccttattcatcaacatggcggacaacaaagccctggcatggcagct
gcgccggggccgggcatgatggacccttaccccgccaattcccacgaacacggttacccc
aaccactataacaactacagccccttccagaacaggacttcatatcagggtcagggctac
ggagccatgagttcctcgcggaacaaccagcccccggcggctggggggcagccaggcaag
cagcagccagcagcggcgggaggagggatggctgctgccgcctcgtacaacaaccagagg
tataacatgggaagccagcaacccacgtcgacgccgactttaaaccagctgctcacgtcc
cccagcctggccaggagctaccccaactacccgcaaggagactataacaaccaggaaggg
ggcactaaggcggcgggggagatggcgagtgcctacggtggggtccatccggcttggcaa
catagggcccaccacccccctcccatgagcccggggaataccgcacaggcccccagcagg
aaccagcctgcaagccccatggaccaggtagggaagatgcgtggccaaccatacggagga
gccgccccttattcccagcagccgcaacaacaacaacaacagcagcagcagcagcagcaa
ggaccttcccctgggcccgggccccagcaaacgggctcctatccagggcagggctacgga
tctccgggcccccaaagatatccggtagggatgcaaggtcgaacgccgggcgcaatgggc
ggcatgcagtatggacagcagatgccagcctatgggcaacagggaccgggaggctatggg
cagcagggtcagggctactatagtcaacacggcggacctcctcacccgagccagcaacag
accccatacggcggccaaccccagagtggttccggagctcccttcccccagcaggggcac
ccttcacaaccgcccggcccacacgggcaatccgggcccccttactcccaatcccaaggt
ccccacggtcctccggccggacaaccgccctacggatccccccagcaacagccaagccaa
cagcagcagcaaggtcccggtcctcagactccgcaaggctcccaaggcnncannnnnnnn
nnnnnnnnnnnnccacaacaacaacaaccaggaagtcaacctcctcaatcccaacaacct
ccaagtcacggccagcagagtcaggcatcgccgtactctcagacaccgcccctgccgcag
cagcagcagtcaccgtatcagaggttcccaccgcctccccaggaactgtcccaagattcc
ttcagctcccagtccagtgcgcctccttccaaccagcccatgccttccaacaagagcagt
caagaagacagcatgcaaggacggccgtcgagtttgccggatctgtcaggctccatcgac
gaccttcccaccggcacggagggtgccctgagcccaggcgtcagcacctcaggggtgtcc
agcagccagggagagcagagcaaccccgcccagtcccctttctcgccgcacacgtcgccc
cacctgccaggaatccgcgggccctcgccgtcgcccgtgggctcccctgccagcgtcacg
ccctctcgcaccggcccgctgtcccccgccgctgtgccaggtaatcagatgcctccccgg
ccgcccagtgtccagtcagacagcatcatgcactcttcgatgaaccagtcgaccatgggc
caagacagagtgtacatgcgtaacccacagatgcccccttacgggtccccgggacaacct
ggctctgccttatctccacgccagtcttcggggggtcagatgcatagcggaatgggaccc
tacccccaaaacaactccatgggaaattatggccctcaggggggccagtacggccctcaa
ggttatcctcgcccgcccggctactcagggatgcccaattctacctacccgagcggcccc
ggcatggggggtgccatgaaccccatgcccgggcagggcagcggggcgccctatggaaac
atggctcccggcggcagagtcggctccggccagatgggcgccaggccctatggtccaggc
atgggctccaacatgggcaacatgcctcctcaggtggtatcggggatgtgcccgcctccg
gggatgaacaggaaagagggcgggccctccatgcaccacggcccgaccaattccatacac
aacaggccaccgggctacgtcatgagccaaggcatgatgggctcagcttctccatatggc
ccggccatgaacagcatgcacgggatgatgaaccagggaggtccgggtccttatccgatg
ggtacaaacatgggcaacaacacccctggaatggcgcctggttcagagtttggcatggac
aaaatcaaccaggcccagaagatgaacaacaaagtggacgggactcctaagactgaatcc
aaaaagaagtccagctcctcaaccatcaccaacgagaagatcacccgcctgtacgagttg
ggtccggagcccgagaggaagatgtgggtcgatcgctacctggcctttgccgaggagaaa
gccatgggcatgaacaacctccccgccgtggggcgcaagcctctcgatttgttccgactc
tatgtctccgtcaaggagatcggaggcctcacccaggtgaacaagaacaagaaatggcgg
gagctcgccaccaacctcaacgtgggcacgtcgagcagcgcggccagttccctcaagaag
cagtacatccagtgtttgtacgccttcgagtgcaagatcgagcgtggcgaggagccgccc
ccggactttttcaatacggacaccaaaaagaaccagcctaagatccagccacccagccct
gctggttctggatcgctccaaggcccccagactcctcagtccaccagtagctccatggcg
gaggggggagaactgaagcctcccaccccggcctccaccccccacacacaaatgcctccc
atgcccggcgccaggagtagcgtcaatttgcaggacccctttgccgacggcagcgacccg
gcattttcccgaaggaacgccatgacccccaattctcagaattaccaacccggaatgggc
ggccccgaaatgatgggtcggatgggtccctatgagtccaacaaggacccctttggtggt
atgaggaaagctggggaacaattcttgccacccggtcctaacagtgggatgggggaaccg
tacagcagaggcccaccgggacccatgggaaatctgccaatgggccagaggcaacaatat
ccttacggatatgaccgcaggcaagagtcaggcatggctcccgacggcagcatggggccc
ggggccgctcagcccaacatgatgccttccggagctgaggcggggatgtactcgccgagc
cgaccgccgccccagcaacgacacgactcgtacgccaatcagtaccctggccaaggcgcg
ccccctggtggcccgtacccaaaccaacaaccgggaatgtatgcacagcagcaaccgaac
tacaagcgtcccgttgacggtagctacggcccccccgccaagcgccatgagggagaaatg
tacaacgtcccttacagtggtcaacagcccgcaggacctcaatcatcagggccccagggc
cagcaggaaatgtacaatcagtacaacgcctaccctggaggggagcggagacccccgggc
ccgcagaaccagttcccttttcccttcggccgggaccgcggctcgtcttccggtgggccc
aattcccaatcgcccatgcctccccagatgatggcgagccccatgccctcgggtcccgac
gggccccagggccccatgtggcagggccgcaacgaaatgggctaccccaactatcacaac
cgccagggcccacctgtgccaagccaggcgcccggctaccacggcatgaaccgctctgag
gagatgatgtcatcggatcagcgcatgaaccacgagggcccgtggcccggccacgtcaac
cagcggcaaccgcccttcggacccggcgggtccggcccgcccatgacgagacccctcccg
tcgacttatcagacatcgcagaaccatattcctcaggtgtccagtccggcacccatgccg
cggccgatggagagcaggacgtcacccagcaagtccccttacatgcatccaggcatcaaa
gtgcagaaagccggacctccggtccccgcctcccacattggacaggcgcccgtgcagcag
ccgatgatgcggcgagatgtgggctttcctcccggctctgtggaatgctcccaaccgcac
ctcaagccgcgaagacggctaaccatgaaggacatcggcacacctgaagcatggcgtgtg
atgatgtcactaaagtcagggttgctagcggagagcacctgggccttggacaccatcaac
atcttactctatgatgacagtagcatcaccacgtttaacttatgccagctgcctggattc
ctggagctgctggtggaatacttcagaaggtgcctgatcgagatcttcggcatcctgaag
gagtacgaagtgggcgaccccgggcagcgaacactcctcgaccccaatgccgccgaagac
tctgacgacgacatgccgatgcccgaaggagaaggcgtcgacacggacgaggaggaggac
gaagacgatgcgccggatgacaccagggtgcaggtgcaggtgaaggaggaggaggaagag
gtgatggaggagaggtcccagaaagacgaggatgatagcaaggagaagtcgagggtcaag
gaacccgctacctcagggtcttcccaggaccccaacgcggagaagcccaggcaggcgagc
aagttcgacagactccccatcaaggtggtgcgcaagaagaaccccttccagggcagctgg
gcgtccaagctgggccagcgccagagctttgaaagcggcctggtccactggagcgtcggc
ggcggtgacatcaccgagcacatccagacgcacttcgagagccgcgtcgggcgcctcaag
gcccgcaagcgcttgcccaaggagaccagagcgggacgggaggtcccggagctgctgccg
ccggccgccggcgcaccggtgaccgccaccatcgacgacgtcctgtcggcacggccgggc
tcggtcacggaggaggcggtgcgcggcggcgccgaggagcagaaggagaacggcaagtac
ctgttcagcatcaaccccgagctccagagccggcgcaacgtgaagatcctcgaggacgag
ccgcacagcaaagacgagactccgctcagcacgctggccgactggcaggactcgctggcg
cggcgctgcgtctgcgtgtccaacatcgtgcgcagcctctcctttgtgcccggcaacgac
caagagatgtccaagcaccccggtcttcttttgctgctggggcgcctggttctgctgcac
caccggcaccccgagcgcaagcaggcgcccgtgacctacgagaaggaggacgaggaggat
gagggcgtgagctgcgagcgcgacgagtggtggtgggactgcctggaggtcctgcgggag
aattgcctggtgactttggccaacatctcgggccagctggacctctctgtgtactctgag
agcatttgcctgcccctcctggacggcctcctccactgggccgtgtgcccctcggccgag
gctctggaccccttccccacgctgggcccgcacggctcgctgtcgccgcagagactggtc
ctggagaccctgagcaagctgagcatccaggacaacaacgtggacctgatcctggccacg
ccgcccttcagccgcctggagaagctgtacggcgccctggtgcggctggtgggcgagcgc
aaggtggcggtgtgccgcgagatggccgtggtgctcttggccaacctggcgcacggcgac
agcctggcggcgcgtgccatcgccgtgcagaaaggcagcgtggggaacctgctgggcttc
ctggaggacagcctggctgccacgcagtaccagcagagtcagagcacgctgctgcagatg
caggcgcactttgagcccaccagcgtggacatgatgcgcagggcggcccgcgccctccac
gccctggcccggctggaggagaaccactcagagttcacgctgtacgaatcacggctgctg
gacgtgtccgtatcgccactcatgaactcggccgtctcgcaggtcatctgcgacgtactc
ttcctggtcggccagtcatga
DBGET
integrated database retrieval system
