KEGG   Hippocampus comes (tiger tail seahorse): 109514575
Entry
109514575         CDS       T04969                                 
Name
(RefSeq) probable histone deacetylase 1-B
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082  ATP-dependent chromatin remodeling
hcq03083  Polycomb repressive complex
hcq04110  Cell cycle
hcq04330  Notch signaling pathway
hcq04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109514575
   03083 Polycomb repressive complex
    109514575
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    109514575
   04350 TGF-beta signaling pathway
    109514575
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    109514575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hcq03036]
    109514575
Enzymes [BR:hcq01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     109514575
Chromosome and associated proteins [BR:hcq03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     109514575
   HDAC complexes
    Sin3A-HDAC complex
     109514575
    BRAF-HDAC complex
     109514575
    REST complex
     109514575
    SHIP complex
     109514575
    MiDAC complex
     109514575
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     109514575
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109514575
  Chromatin remodeling factors
   NuRD complex
    109514575
SSDB
Motif
Pfam: Hist_deacetyl Glypican
Other DBs
NCBI-GeneID: 109514575
NCBI-ProteinID: XP_019723364
UniProt: A0A3Q2YLY9
LinkDB
Position
Unknown
AA seq 481 aa
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
GEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGG
GGYTIRNVARCWTYETAVALDCSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTDEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSADEDDEDQDKRISIRAHDKRIACDEDF
SDSEDEAEGQGGGRRNATNHKKAKRVKKEEERDGDEKKEVKEDDKEEKMDTSVAKEEVKT
T
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggcgctgtcgcaaggaacaaagaagaaagtttgctattactatgatggtgacgtgggg
aactattattacggccagggccaccccatgaagccccacaggatccggatgacacacaac
ctgctcctcaactatggcctgtacaggaagatggagatctacaggccgcacaaagccagc
ggcgaggagatgaccaaataccacagcgacgactacatcaagttcctcaggtccatcagg
ccggacaacatgtcggaatacagcaaacagatgcaaagattcaacgttggagaagactgt
ccggtgtttgacggcttgtttgagttctgccagctctccacgggcggctccgtggcgggc
gcggtgaagcttaacaagcagcagaccgacatcgccgtcaactgggcgggaggactccac
cacgccaagaagtcggaggcgtctggtttctgctatgtcaatgacatcgtgctcgccatc
cttgagctgctcaagtaccatcaacgcgtgttgtacatcgatatcgacatccatcacggc
gacggcgtggaggaggcgttctacaccactgaccgcgtcatgaccgtctccttccacaag
tacggcgaatactttccgggcactggagacctgagggacatcggcgccgggaagggaaag
tactacgccgttaactatccactgagagacggcatcgacgacgagtcttatgaggccatc
ttcaaacctatcatggccaaagtgatggagatgtaccagccgagtgcagtggtcctgcag
tgtggcgccgactccctgtcaggagacaggctcggctgcttcaacctcaccatcaaaggt
cacgccaagtgcgtggagtacatgaagagcttcaacctgccgctgctgatgctgggcggg
ggcggctacaccatccgcaacgtggcgcgctgctggacctacgagacggcggtggcgctg
gactgctccatccctaacgagctgccgtacaacgactactttgaatatttcgggcccgac
ttcaagctgcacatcagcccgtccaacatgaccaaccagaacacggacgagtacctggag
aagatcaagcagcgccttttcgagaacctccgcatgctgccgcacgcacccggtgtccag
atgcaggccatacccgaggacgcgccgcaccccgacagcgcagatgaggacgatgaggac
caggacaaacgcatttccattcgcgctcacgacaaaaggatagcatgcgacgaggatttc
tcggactccgaggatgaggccgagggtcagggaggcggccggcggaacgcgaccaatcat
aagaaggccaagcgggtgaagaaggaagaggagcgtgacggggacgagaagaaagaagtg
aaggaggatgacaaggaggaaaagatggatacttcagtagcaaaagaagaagtgaagact
acttga

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