Hippocampus comes (tiger tail seahorse): 109514713
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Entry
109514713 CDS
T04969
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcq03009
]
109514713 (ddx54)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109514713 (ddx54)
Ribosome biogenesis [BR:
hcq03009
]
Eukaryotic type
Pre-60S particles
Helicases
109514713 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
109514713
NCBI-ProteinID:
XP_019723595
UniProt:
A0A3Q2Z940
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MAQRKKKMTKKKKNTAGREPNADSDGGDFEIDVQIKDDDSPKGKLLRFPTASDCLSDVEP
DTRELVRAQNKKKKKSGGFQSMGLCYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVAM
ARTGSGKTAAFLVPMFEKLKAPHAQTGARALILTPTRELALQTMKFTKELGRFTKLKTTL
ILGGDSLEDQFAALHENPDIIIGTPGRLMHVVQQMNLKLNHVEYVVFDEADRLFEMGFAE
QLQEIIRRLPDTRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDQIKLSFFHLR
VDDKPALLLHLLRNVVKPQEQTVVFAATKHHVEYIKELLSSEGLECAYIYSALDQTARKI
NIGKFVHRKAMVLVVTDVAARGIDIPLLDNVINYNFPSKSKLFLHRVGRVGRAGRSGTAY
SMVCPDEVPFVYDLHLFLGRPVQLATPEHSADSDGTFGRVPQSILDDAAVNLITAHDNSL
DLQNLHRVSENAYKQYLKSRPNPSVESIRRVKNLDLTCMAVHPLLGAGLEKTELDRLQIV
DAIKGYKSKSTIFEINSSSKTLASEVMRAKRSKDSRLVDKFSKDRKSLAAERRLHKPVSV
PAGQDAADSGEDHALQDVFCEVIGGKSKANQDEGEARPKNKRGKRVPAKDEEYYIPYRPK
DFNSERGLSLSGEGSAFEAQASSAVLDLMGDEGEGLNQHKRIMKWDRKRKRFVTDTGKDD
QKKRIKLDGGQTIHKKNNKKNFYEEWKKKYKIDEGAAGSDGEGGGGGGRRPPRGRGRGRG
QSSAGPQFASNGSRVRSELKTSQQILKQRKKQQKHRFLQSGGLKNLRAKNKKWLGEVKKS
GFGRGSQKKGKMRKRM
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagaaagaagaaaatgaccaagaagaagaaaaatacggctggcagagagccc
aacgcggattccgacggcggagacttcgaaatagacgtccaaatcaaagacgatgattcc
cccaagggaaaattattgcgcttccccaccgcttcggactgcctgtctgatgtggagcct
gataccagggagctggtccgagcccagaataagaagaagaaaaaatcgggaggatttcaa
tccatgggactctgctaccccgtcttcaagggcgtcatgaagaagggttacaaggtgcca
acgccaatccaaagaaagactatcccggtcattctggacggcaaagacgtcgtagccatg
gctcggactggcagcggcaagacggccgccttcctggtgcccatgtttgagaagctgaag
gcgccgcatgcccagacgggtgctcgggctctcatcctgacccccaccagagaactggcc
ctgcagactatgaagttcacaaaagagttggggaggttcactaagctgaagacaaccttg
atccttggtggagacagtttggaggaccagtttgctgcgcttcatgaaaaccccgacata
atcatcggtacccccggccgtctcatgcatgtcgtccagcaaatgaacttgaagttgaat
catgtggagtacgtggtgttcgacgaggctgacaggttgtttgagatgggctttgccgaa
cagctccaggagattatcagaagacttcctgacactagacagactttgttgttctctgcc
acgctgcccaaactgctggtggagtttgccagggcgggactgacagaaccagtgttgatt
cgtttggatgtggactctaagctcagtgaccagatcaagctgtccttcttccacctgcga
gtggatgacaagccggcactgctgcttcaccttctgaggaacgtggtcaagcctcaggag
cagacggtggttttcgccgccaccaaacatcacgtggagtacatcaaggagttgttgtcg
tcagaagggctagagtgcgcctacatctacagcgccctggatcaaacggccaggaagatc
aacatcgggaagtttgtgcaccgcaaagccatggtgctcgtcgtgacggacgtggccgct
cgcggtattgacatcccgctgctggacaacgtcatcaactacaactttccctccaagtca
aagctcttcttgcacagagttggtcgcgtgggccgagcggggcgcagcggcacagcctac
agtatggtttgtccagacgaggtcccttttgtgtatgaccttcaccttttcctgggaaga
ccggtgcagctcgccacgccagaacactcggcagattcagacggaacgttcggtcgggtg
cctcaaagcatcttggacgacgcagctgtcaatctgatcacggcgcacgacaattccttg
gacctgcagaacctgcaccgcgtctcggagaacgcctacaagcagtacctcaagtctcgg
ccgaatccctcagtggagtccatcagacgagtgaagaacttggacctgacctgcatggcc
gtccatcctttactgggggcgggattggagaaaactgaactggaccgccttcaaatagtc
gacgccatcaagggctacaaatctaaatcgacaatctttgaaatcaactccagcagcaag
acgctcgccagtgaggtgatgcgggccaagcgctccaaggactcgcggctggtggacaaa
ttcagcaaggacaggaaaagtctggcggccgagagacgcctccataaacccgtcagcgtc
ccggccggccaagacgctgccgactcaggcgaggaccacgcactacaggacgttttctgc
gaggtgattggtgggaagagtaaggctaatcaggacgaaggagaagcgcgtccaaagaac
aagcgaggcaaacgcgtgccggccaaagacgaggaatactacatcccctacagacccaaa
gacttcaactcggagaggggcctaagtttgagcggagaaggcagcgcctttgaagcgcaa
gcgtcctccgctgtcctcgacctcatgggagacgaaggagaaggactcaaccagcacaag
aggattatgaaatgggatcgaaagaggaagcgctttgtaacagacacgggcaaagatgac
cagaagaaacgaattaaactcgatggcggtcaaaccatccacaagaagaacaacaagaag
aacttttacgaggaatggaagaagaagtacaaaattgatgaaggagccgcagggtcagat
ggggaaggaggtggaggaggcgggaggaggccaccaagaggccgcggccgtggtcgcggc
cagagttcagcgggccctcagttcgcgtccaacggcagcagagtgcgcagcgagctcaaa
accagccagcagatcctgaaacaacgcaagaagcaacagaagcatcgcttcctgcagagc
gggggcctcaagaacctgcgcgccaagaacaagaaatggctgggagaggtgaagaagtcc
ggcttcggtcggggcagccaaaagaagggcaagatgaggaagaggatgtga
DBGET
integrated database retrieval system
