Hippocampus comes (tiger tail seahorse): 109515187
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Entry
109515187 CDS
T04969
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hcq00535
]
109515187
Proteoglycans [BR:
hcq00535
]
Extracellular matrix (ECM) proteoglycans
Others
109515187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
VWA_3
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
109515187
NCBI-ProteinID:
XP_019724357
LinkDB
All DBs
Position
Unknown
AA seq
1837 aa
AA seq
DB search
MTSPHWMLTVGFLLLIRVHAARVQGQVSSPRRFRSKVLSPTRLLVSWKEPKGPLDGYVLA
YSTRPGGEETEVSVAKEDAELLIDTFDASRDYAFKVFALRGALRSKPLLARHQAERSGQE
RLQSQSPQDGGPPHVNAITEGEERFTCDTPATADVVILVDGSWSIGRSNFRLVRSFLENL
VQAFAVDADGTRVGLVQFSGEPRVEWHLSSHMTKAAVLDAVRNLPYKGGNTLTGLALTFV
LENSFKAESGSRAHVPKVAILITDGKSQDDVVPPAQTLRDAGIRVFAVGVKNADEDELKA
IASPPADTHVYNVADFDVMSNIVDVLTRSVCRTVEQLAVGGDAEPPPESAPAPRDLVISD
ITARSFRLTWAPPASEVERYRVVYYPASGGKPEEKVVPGWERSVLLEHLSSLSDYQVAVF
AIYRNAASEALRGSASTLALPAVERLDLSDPTHDTMRVRWSAAPAASGYMILYAPLSQGE
PDDEKEVKVASDVEEAVLEDLTPSTEYTVTVYALYGEEASDPVTGQLSTLALLPATNLRL
TDVGHNSARLSWDSASGKATGYSVIYARSDGVESNQVEAGRETSWLLSNLSPLTEYTVGV
VATYDQGRAQPATQSFSTGTVPEPANVRSHDASTVGFRVSWQTPADDVALYRLGWTPADG
GRGGGSDSGEVLLNANINTYTVTGLRPSTEYQVLVSAIYGNEVESDQVVLLEYTVERTTT
VALVTASVPAPRSGVRDMTVDDQTALSLRVSWQHSDAHNVRHYRLSYGSADGNQETRTLP
STQTSLVLQPLSADTLYKMAVTPVYLDGDGATVAASGRTLPPLPPRNLRVSEEWYNRFRI
SWDLPGSPTTGFRVVYQPLSGPGPALETFVGKDVSTMMIVGLLSGAEYGVKVLASYGGGS
SEPLSGRARTLPLAVTELSVHRRGPSGMCAQWRPQRHAGAYRVVIESPGGGHVEEAKLSA
GSSRHCFANLRPGTAHKVSVYARLQDGTEGPAVSATDDTEAVPAPTTALPPTTTTLPTVP
PAKEVCKAAKADLAFLVDGSWSIGDDNFLKIIGFLSSTAGALDQIGPDGTQVAIAQFSDD
TRTEFALDAYDDKERLLDAINKISYKGGNTKTGRAIRHMKDNIFTAEGGVRRGVPKVLVV
LTDGRSQDDVNKISKEMRMEGFIIFAIGFADADYGELVSIASEPSDRHVFFVDDLDAFKK
IEEKLVTFVCEAATATCPSVAMTGGPAPGFRMMELFGLLAERYSGLAGVSMVPGTFNAFP
CFRLHDGALLAQPTRLLHPEGLPSDYTITLLFRLLPSTPQEPFALWEVLDQDRDPLVGLI
LDNGGKTLTFFNNDYRGHFQTVTFEGPHVKKLFHGSFHKLHVVISKTSASVLVDCQAVST
KAIEAAGNISTAGTEVLGRMVRSRGKKDNSAPFELQMFDIVCSTSWASRDLCCELPGLRN
EAQCPAMPKACTCTQDSKGPAGPAGPPGGPGIRGARGDRGAPGSVGPAGPVGEPGVPGAQ
GAPGPIGPSGRSIRGAPGAPGEQGQKGESGQQGLQGVAGRVGAPGREGLPGPRGLLGKDG
PPGQSGPSGTIGSPGAPGAPGTTGPPGKQGDLGPPGPPGTKGDKGERGDLQSAATVQTIA
RQVCEQLIQSHMAQFNAILNHAPSSSVTIRTVPGPPGEPGRNGSPGPQGEQGPSGRPGFP
GQNGLNGQPGEQGPPGERGEKGSPGVGVQGPRGPPGPPGPPGQGRPGSQGPTGRPGNSGV
PGRPGVPGPVGSAGPPGYCDQNSCVGYNVGVQLPSNIFPNYGEVEEDDPYRYYQPDYPPP
RPVQDAELDPDRSVLELSPQDEGAGPDRRLRRGSVRK
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaccccactggatgctcaccgtgggtttcctgctcttgatccgcgtccacgcc
gcgcgtgtacagggacaagtgtcttctccgagaaggttccggagcaaagttctcagtccc
acccggcttttagtgtcctggaaggagcccaaaggtccgctcgacggatacgtgctggcc
tacagcacgcgccccggcggtgaggagacggaggtgagcgtggctaaagaggatgccgag
ctgctgatcgacaccttcgacgccagcagagactacgccttcaaggtgtttgccctgcgg
ggggcgctaaggagcaaaccgctgctggccagacaccaagcggagagatcgggacaagaa
aggcttcagtcccaaagtccgcaagacggcggccccccgcacgtcaacgccatcactgaa
ggtgaggaaaggttcacctgcgacacgccggccaccgccgacgtggtgatcctggtggac
ggctcgtggagcatcggccgcagcaacttccgactcgtcagaagctttctggagaacctg
gtgcaggccttcgcggtggatgcggatggcacgcgtgtcggcttagtgcagttcagcggc
gaacccagggtggagtggcacctgagcagtcacatgaccaaagcggccgtcctggacgcc
gtcaggaacctgccctacaaaggtggaaacacgcttacaggtttggcgctgaccttcgtc
ctggagaacagcttcaaagccgaatccggatccagggcccatgttcccaaggttgccatc
ctgatcacggacgggaagtcccaggatgacgtggtgccgcctgcccagaccctgcgggac
gccgggatccgagtctttgccgtcggcgtgaagaatgcggatgaggacgagctgaaggcc
atcgcctcgccgcccgccgacacgcacgtctataacgtggccgactttgacgtgatgagc
aacatcgtggacgttctcaccaggagcgtctgccgcacggtggagcagctggcagtcggg
ggcgatgcggagccaccccccgaaagcgcgcctgctccccgtgacctggtgatctctgac
atcacggctcggagtttccgcctgacctgggcgccgccggccagcgaggtggagcgctac
cgcgtggtctactacccggcgagcggcggcaagccggaagagaaggtggtcccggggtgg
gagcgcagcgtgctgctggagcacctgagctcactgagcgactaccaggtggccgtgttc
gccatctaccgaaacgccgccagcgaggcgctgagagggagcgccagcacgctggccctg
ccggccgtggagcgcctggacctgtccgaccccacccacgacaccatgagggtccgctgg
agcgccgcccccgccgcctcaggatacatgatcctctacgcgccactcagccagggagag
cccgatgacgagaaggaggtgaaggtggcgtccgatgtggaggaggcggtgctcgaggat
ctgacgccgtcgacggagtacacggtgacggtctacgccttgtacggagaggaggccagc
gaccccgtcaccggccaactcagcacgctggcgctgctcccggcgaccaatctgcgactg
acggacgtgggccacaactccgcccgactcagctgggactccgcctccgggaaggccacg
ggctacagcgtcatctatgcccgcagtgacggcgtcgaaagtaaccaggtggaggcgggc
cgcgagacctcctggttgcttagcaacctgagccccctgaccgagtacacggtgggcgtg
gtcgccacgtacgaccaggggcgagcgcagccggccacgcaaagcttctccacggggacc
gttccagaaccggccaacgtgaggagccatgacgcctccaccgtcggcttccgggtgtcg
tggcagacccccgctgacgacgtggcactctaccgcctcgggtggacacccgcagacggt
ggccgtggtggtggcagcgacagcggagaggtgctgctcaacgccaacataaacacctac
acggtcactggactccgcccctccaccgagtaccaggtcctcgtgagcgccatctatggg
aacgaggtggagagtgaccaggtcgtgctgctagaatacactgtggagagaacgaccact
gtcgctctggtaactgccagcgttccagcaccccgcagcggcgtgcgggacatgaccgtc
gatgaccaaaccgccttaagcctgcgggtgtcatggcaacactcggatgcccacaacgtc
cgccattaccgactcagctatggcagtgcggatggcaaccaagagacgaggacgcttccg
tccacgcagaccagtttggttttacaaccactgtcggccgacaccctgtacaaaatggcc
gtcacgcccgtctatctggatggagatggagcgacggtcgcggccagcggacgcacgctt
ccaccgctgcctcccaggaatctgcgcgtttcggaggaatggtacaaccgcttccggatc
agctgggaccttcccggttctcccacgacgggcttccgcgtggtgtaccagccactgtcg
ggccccggacccgcgctggagacctttgtgggcaaggacgtgagcaccatgatgatcgtc
ggccttctgagcggcgccgagtacggcgtcaaagttctggcgtcttacggcggcggatcc
agcgagccgctgtcgggccgggccaggacactcccgttggccgtgaccgagctgagcgtt
caccggcgggggccgagcggcatgtgcgctcagtggcggccgcagagacacgccggcgcc
tacagagtcgtcatcgagtcccccggcggcggtcacgtggaggaagccaagctgagcgca
ggatccagccggcactgtttcgccaacctgaggcccggcacggcgcacaaggtcagcgtt
tacgcccgactgcaggacggaaccgaaggcccggccgtgtccgccaccgacgacactgaa
gccgtccccgccccgacgaccgccctgccgccaaccaccaccacgcttcccacggttccc
cctgccaaggaagtctgcaaggcagccaaggccgacctggcattcttggtagacggctcc
tggagtatcggtgatgacaatttcctgaagatcattgggttcttgtccagtactgccggg
gcgctggaccagattggacctgatggcactcaggttgccatcgctcagttcagcgacgac
acgcgcaccgagtttgcgttggacgcgtacgacgacaaggagcgcctcctggatgccatc
aacaaaatctcctacaagggaggaaacaccaagacgggtcgcgcgatccggcacatgaaa
gacaacatcttcacagcagagggcggagtcaggaggggagtccccaaggtcctggtggtc
ctcaccgacggccgatcgcaggatgacgtcaacaagatctccaaggagatgcggatggaa
ggcttcatcatcttcgccatcggcttcgctgacgcggactacggggaattggtgagcatc
gccagcgaacccagcgacagacacgtcttttttgtcgacgacctggacgccttcaagaag
atcgaagagaagctggtgaccttcgtgtgcgaagccgccacggccacctgtccgtcagtg
gccatgaccggcggccccgctcccggcttccgcatgatggagctttttgggctgctggcg
gagcgctacagcggcctggcgggcgtttccatggtacccggaacctttaacgcatttccg
tgcttccgcctgcacgacggcgctctactggctcagccaaccaggttgctccaccctgaa
ggacttccgtcagactacaccattacgctgctgttccgcctgctgcccagcaccccgcag
gaaccttttgcactttgggaggtcttggaccaggaccgcgatccgctggtgggcctcatc
ctggacaatggaggaaagaccttgactttctttaacaacgactacagaggacactttcag
accgtcaccttcgagggtccgcacgtcaagaaacttttccacgggagctttcacaagctt
cacgtggtgatcagcaagaccagcgccagcgtgctcgtggactgccaggccgtgtccacc
aaagccatcgaggcggcgggaaacatcagcacggccgggacggaggttctgggcaggatg
gttcgctccagagggaagaaggacaactcggcaccatttgagctccagatgttcgacatt
gtgtgcagcacctcgtgggcctccagagatctgtgctgtgaacttcctggtttgcgcaac
gaggcccagtgtcctgccatgcccaaggcctgcacctgcacccaggacagcaaaggcccc
gcaggtccagctggacctcctggtgggccgggaatacgaggagcccgtggtgatcgtgga
gcacccggttcagtggggccggctggaccggtcggcgagcccggagtaccaggagcccag
ggggccccaggaccaatagggcccagcggacgctccatcaggggtgccccaggtgctccg
ggtgagcaaggacagaaaggagagtcaggtcaacaaggtctgcagggggtggccggacga
gtgggcgctccaggcagagaaggacttcccggccccagagggctattgggcaaagacggt
ccccccggccaatcgggcccctccggaactatcggaagtccaggagctccgggggccccc
ggtaccacgggacccccaggaaaacagggtgaccttgggccgccgggtcctccaggaacc
aagggtgacaaaggtgaacggggcgacctgcagtcggcagccacagtccagaccatcgcc
aggcaggtgtgtgagcagctcatccagagtcacatggctcagttcaacgccatcctgaac
cacgcgccgagctcgtccgtgaccatccgcaccgtcccgggacctcctggagagcccggt
cgaaatggatccccagggccgcaaggggaacagggcccctctggaaggcccggtttccct
ggacaaaatggcctgaatggccaacctggagaacaaggtcccccaggggagagaggagaa
aagggctctcctggtgtgggggttcaaggccccagaggaccgccgggacctcctggtccc
ccgggccaaggcagaccaggcagccagggcccgaccggaagacccgggaactcaggggtc
ccgggacgtcccggggttcccggcccggtgggctctgccgggcctcccggttactgtgac
cagaactcctgcgtgggctacaacgtcggagtccaactgccgtccaacatcttccccaac
tatggcgaggtggaggaggacgacccgtaccgctactaccagcccgactacccgccgccg
cggcccgtccaggacgcggagcttgacccggaccgctcagtactggagctgagcccccag
gatgagggggcggggccggataggaggctgaggagaggaagcgtcaggaagtga
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integrated database retrieval system
