Hippocampus comes (tiger tail seahorse): 109516032
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Entry
109516032 CDS
T04969
Symbol
tdrd9
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD9 isoform X1
KO
K18408
ATP-dependent RNA helicase TDRD9 [EC:
5.6.2.5
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcq03036
]
109516032 (tdrd9)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
109516032 (tdrd9)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109516032 (tdrd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_14
AAA_19
ResIII
T2SSE
PhoH
AAA_7
Motif
Other DBs
NCBI-GeneID:
109516032
NCBI-ProteinID:
XP_019725759
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MAERFTAEQISNWFTSGSAFANIKLTEEAVENKLSGTSKETSSPVKVPVEDDLESVNKTK
DDRSISESLGSSPAPLASYKYPTFPITKSRQELISLIENNSVVIIRGATGSGKTTQLPQY
ILDHYNDKNASCNVAVTQPRKIGATSIARWVASQRKCTCGSLVGYQVGLEKMATEHTRLI
YMTTGVLLEKLVAAKALTEYSHIFIDEVHERTVEMDFLLLIVRRLLNSNSRYVKVILMSA
TINCTQFAEYFSNPVRGKMSPAYVFEVEGAPYTIEDFYLDDLQDICQHNLDSAGSDDVYI
STAMYKLAICLIENFDKMEGERSSDAVTEGCGNLSERGSVLVFLPGLYEIRYMQQALSTL
VHKRLQVFALHSTITMEEQYGVFLSPVPGYRKVILSTNIAESSVTVPDVKYVIDFCLTRQ
LICDKETNYQSLRLTWASKTNCNQRRGRAGRVSKGYCYRLVTKAFWRNEIPGYMIPEMLV
SPLSNIMLKVKLLGMGDPRSLLSTAPSPPNLKDIMRTVLQLKEMGALSAKQNDEYQNDDG
ELTFLGRVLAHLPVDLYLGKMIVLGHVFGCLDECLIIAACNSMKSFFAIPSMQQLAGHRS
KMAFAQGSQSDSVAFVNTFKAWLSFKKQGQLRSMKDELVWGKENFIQIKRIREVAELYLD
LKERVKQFNMCVPENTQPSDYKSIHTQKFILQVVIAGAYYPNYFVQGEIDDDLASRELSG
FNPNTTVMMRNLPTYSFLYYKQLLSLFRQCGQVKAIAFESSRAYVEFYKTSQDSATVPEV
SLALLLAQQKPALELSVYPTEQIEACAGGRQITHLKYARVNVDLQSQSVLPVGVVSSTLD
PDKLPPNLFFVVNITTVVDVGHFWGFQADEASLEKQRQLTGEINMRTLEPVTVSLYPNFL
CLAPYSDGDEQSLYYRAKILHICGDTVEVFFLDFGNTVSVQCNSLRELPSDLQSHPLQAQ
EFQVIEMRPSAESIIFGNRWSSRARHRFMALVKGHSVIVSLYSVLHNVMRVQLLISSDTT
NRSIVDIFVEEGHAIRAEESFDSKQNHEVLISLYKDIETGMYVPNAASSSWKDRKKEEKQ
LIDCLLSQFSKTCPPYSRTKVRLHGPSSPYKIQFHCLFHDTYIKHVNIDQYSINTMAVNE
NPHYKHQRMLVAGSVFINSSGNILPKDTSLMPDIPGLPAIVTMLFTPIMELRTNVDKTRY
IGALCGLGWNSETQKGVLPDHDIELAFDVKFDFEDITEINALRVAMNHLACEGPSGTLHL
PSDKIGQFQEDCRERLIRLFTKSPPRENVTSVYFDKAGKWNQVEPSLKMDVAEAGTGKSR
GVLFDLHPLILLNN
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgattcacggccgagcaaatttctaattggttcacctctgggtccgcgttt
gccaacattaagctcacagaagaagctgtcgaaaataaattgtctgggacgtcgaaagag
acgagcagcccagtaaaagttcctgttgaagacgacttggaaagtgtgaacaagacaaaa
gatgaccggtcaatttcagaatccttaggaagcagccctgctccacttgcaagctacaag
tatcccaccttccccattaccaaaagcagacaggagctgatttctctgatagaaaacaac
tctgtcgtgattattcgaggagccacgggcagtggcaagaccacccagctgccacagtac
attctggaccactacaatgacaaaaatgcctcttgcaacgttgcagtcacgcaaccacgc
aaaattggtgccaccagtattgctcgctgggtcgccagtcagagaaagtgtacctgcggg
agtctggttggatatcaggttggactggagaagatggctactgagcacacccgactaatc
tacatgacaacaggagtgcttctggaaaaactggttgctgccaaggccctcacagagtac
tcgcatatttttattgatgaggttcatgagcgtacggtggaaatggactttctcttgctg
attgtgaggagacttcttaacagcaactctcgttatgtgaaggtaattctcatgtcagcc
accatcaactgcacacaatttgcagagtatttcagcaaccctgttcgtggaaagatgagt
ccagcctatgtgtttgaggtggagggtgcaccttataccattgaggacttttacctggat
gaccttcaggacatctgtcaacataatctggattcagcaggttcagatgatgtttacatc
tcaactgcgatgtacaaacttgccatctgcctcattgagaactttgacaaaatggagggc
gagaggagcagtgatgcagtgacagaaggctgtgggaacctctcagagaggggcagcgtc
cttgttttcctccccggactatatgagataagatatatgcaacaagccctgtccacgctg
gtccacaagaggttgcaggtttttgccctccactccaccataacaatggaggagcaatat
ggtgttttcctgtctcctgttcccggatacaggaaggtcattctttcaacgaacattgca
gaaagttcagtgactgtacccgatgtcaaatatgttattgatttctgcttgacccgtcag
ctgatttgtgacaaagaaaccaattatcaatctctgcgtctcacatgggcgtcaaagacc
aactgcaaccaacgtagaggaagggcgggtcgagtttccaaaggctactgctaccgccta
gtcaccaaagccttctggcggaatgaaatcccaggctacatgatccctgaaatgttggtt
tccccactgtccaacataatgttaaaggtgaagctgctgggcatgggagaccctcgatcc
ctcctttcgacagctccctcacctcccaacctcaaggatattatgagaaccgtgctccaa
ctgaaagagatgggggccctgtctgctaaacagaatgatgaatatcaaaatgatgatggt
gagctgacgttcctgggtcgagtgctggcccacttacctgtggacctttaccttggcaag
atgattgtcctgggccacgtcttcggttgtctcgatgagtgtctcatcatagctgcctgc
aactcgatgaagagtttctttgccataccttcaatgcaacagcttgccggtcacaggagc
aagatggcctttgcccaaggcagccaaagtgattccgttgcatttgtcaacacctttaag
gcatggctctccttcaaaaagcaaggacagttgagaagcatgaaggatgaactggtttgg
ggcaaagagaacttcattcagatcaagaggatccgagaggttgcagaattgtatttagat
ctgaaagaacgtgtgaaacagttcaacatgtgtgtgccagaaaatacccaaccctcagac
tacaaaagcatccacacacagaagttcattcttcaggtagtcattgctggtgcctactac
cctaactactttgtacagggagagattgatgatgatctggcttccagagagttgagtggc
ttcaacccgaacacaacagtcatgatgaggaacctccccacctacagttttctttactac
aagcagctgctgtctctcttccgccaatgtggacaggtcaaagccattgcctttgagagc
tccagagcatatgtggaattctacaagacatcacaggactctgcaaccgtgcctgaggtc
tcactcgccctcctcctggcccagcagaaacctgccctggagctttccgtctacccaaca
gaacaaatagaagcctgtgccgggggcagacaaataactcatttgaaatatgcacgggtg
aatgttgacttacaaagccagtcagtccttccagtgggagtggtgagcagtacccttgac
ccagacaaactgcctcccaacctcttttttgtggtgaacatcacaacggtggtggacgtg
ggtcatttctggggattccaggcagatgaagccagtttggagaagcagcggcaattgaca
ggcgagatcaacatgcgcacccttgagcctgtgactgtgtcgctctatcccaattttctt
tgcctggcgccttactccgatggagatgaacagagcctctactaccgggccaagatcctg
cacatctgtggagacacagtggaggtgttcttcttggactttggtaacacagtgtctgtc
cagtgcaacagcctgagggagctcccatctgacctccagtctcaccccttgcaggctcag
gagtttcaagtgattgaaatgcgtccgtcagcagagtccatcatatttggcaaccgctgg
agcagccgtgcccgtcatcgattcatggcactggtgaaaggccactctgtcattgtgtcg
ctgtactctgttctccacaatgtgatgcgtgtgcagctgctcatcagcagtgataccaca
aacagaagcatagttgacatctttgtggaagagggccacgccatccgtgctgaagaaagc
tttgactccaagcaaaaccatgaggtgctgatttctctgtacaaagacatcgaaacaggc
atgtatgtccccaatgctgccagcagctcctggaaggatcgcaagaaagaggagaagcag
ctcatcgactgcctcctctcccagttttccaagacctgcccgccttattccaggacaaag
gttcgtttgcatggaccaagcagtccttataaaatccaattccactgtttgttccacgat
acgtacatcaagcacgtgaacatagatcaatacagcatcaacaccatggctgtgaatgaa
aatcctcactacaagcaccagagaatgctggtggcggggagtgtgttcatcaattcttca
ggcaacattcttccaaaggacacctcactaatgccagacatccctggactccctgccatt
gttaccatgctcttcaccccaattatggagttacgcaccaacgtagacaaaactcgctac
atcggtgcactctgtggtttgggctggaacagtgaaacacaaaaaggcgtccttccggac
catgacattgaactggcctttgatgtcaagtttgattttgaagacatcactgagataaat
gctttgcgagtggcaatgaaccacctggcgtgtgaagggccgagtggcaccctgcacttg
ccgtctgacaagatcgggcagttccaggaggactgtcgtgaacgtctcattagattgttc
acaaagtctcctccaagggaaaatgtcacttcagtgtactttgataaagcagggaaatgg
aaccaggttgagccttcactcaagatggacgtcgccgaggctggaactggaaaatcaaga
ggagttctctttgacctgcatccactcatcctcctcaacaactaa
DBGET
integrated database retrieval system
