Hippocampus comes (tiger tail seahorse): 109516230
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Entry
109516230 CDS
T04969
Symbol
nrxn1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109516230 (nrxn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109516230 (nrxn1)
Membrane trafficking [BR:
hcq04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
109516230 (nrxn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
109516230
NCBI-ProteinID:
XP_019726146
LinkDB
All DBs
Position
Unknown
AA seq
1499 aa
AA seq
DB search
MVLQKHHSAHLIWVGLLICGYVEVGTCLEFTGAQGQWARFPVWNACCESEMSFNMKTKSS
HGLLVYFDDEGFCDFLELLLLNGKLSLRFSIFCAEPAFVISDTAVNDSQWHAVTLRRNFK
NTTLMVDNEIKWVEVKSKRRDMTVFSHMFVGGIPPELRSVALRLTSAAIRDQPPFTGWIT
DIKVNNTASAIVDSEGVIKDLCGAANICLNGGQCSLINNKPTCDCSQTGFQGTDCSEEEK
YTEGLAHLMMGDQGQRGETWLLRSLLSIQGKEEYVATFKGSEFFCYDLSLNPIQSSSDEI
TLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNDWH
DVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGS
PVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKLHGTVAFKCENVATLDPITFETPE
SFIVLNKWNAKKTGSISFDFRTTEPNGLLLFSHGKPKQQQKDSKSPQILKVDFFAIEMLD
GHLYLLLDMGSGTTKTKAVNKKVNDGEWYHVDFQRDGRSGTISINTLRTAYTAPGESEIL
DLDDHLYLGGLPENKMGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDVRRLAEIQKAAG
VKPSCSKEPPKQCLSNPCQNNGICREGWNRYVCDCSGTGYLGRSCEREATVLSYDGSKFM
KVQLPVVMHTEAEDVSMRFRSQRAYGILIATTSRDSADTLRLELESGRVRLTVNLDCVRI
NCTSSKGPETIFAGQNLNDNEWHTVRVFRRGKNLTLTVDDLTPVEGQMAGDHTQLEFHNI
ETGIVTEKRFMSMVPSNFIGHLQSLSFNGMAYIDLCKNGDIDYCELNAMIGFKNIIADPV
TFKSRSSFVTLTALQAYYSMHLFFQFKTTSSDGLILYNSGDGNDFIVVELVKGYLHYVSD
LGNGAHLIKGNSNRPLNDNNWHSVIISRDANNLHMVKIDTKITTQTTTGAKNLDLKGNLY
IGGVAKEMYKELPKLVHAKEGFQGCLASVDLNGRLPDLMSDALECVGQIERGCEGPSTTC
QEDSCANQGVCLQQWEGFSCDCSMTTFGGPLCNDAGTTYIFGRDGGIITYTWPPNDRPST
RADRLAIGFSTHLKDAVLVRVDSSSGLGDFLKLHIERGNIAVVFNVGTDDINIEETSKFV
NDGKYHIVKFTRSGGNATLQLDDLPVIERYPQGNNDNERLAIARQRIPFRLGRVVDEWLL
DKGRQLTIFNSQTTIQIGGWERDRTRSFQGQLSGLYYNGLKVFNMAAEGDPNIKIQGSAR
LVGESPSPITPQSSTTANRSETSTTIMELTTTTASSRRVKQTTPREPQQTSEDMLVASAE
CPSDDEDIDPCEPSSGGLANPTGAGPKGFPDSSEVFRESSSTTGMVVGIVAAAALCILIL
LYAMYKYRNRDEGSYHVDESRNYISNSAQSNGSIVKEKAVNPAKTCSKNKKNKDKEYYV
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaagcatcacagtgcccatttgatttgggttgggctgctcatttgtggc
tacgtagaagttggcacttgcctggagtttacaggtgcacagggacagtgggctcggttc
ccggtttggaacgcgtgctgtgaaagtgaaatgagtttcaacatgaaaacaaagagctcc
cacgggctgctggtttactttgacgacgagggattttgcgactttttggaactcctctta
ctgaacgggaaactcagccttcgcttttccatcttctgtgccgagcccgccttcgtaata
tctgacacggcggtcaatgacagccagtggcacgctgtcaccctaaggagaaactttaag
aacacaaccctgatggtggacaatgagatcaaatgggtggaggtgaagtccaaaagacgg
gatatgacagttttcagccacatgttcgtcggcggcatcccgccggagttgcgatcggtg
gcgttgcggctcacgtctgctgccatcagggatcagccccctttcactggttggataacg
gacataaaggtcaacaacacagcatctgccattgtggacagtgaaggggtcataaaggac
ctgtgcggtgcagccaacatctgcttaaatggtggacagtgcagtttaatcaacaacaaa
cctacctgtgactgctctcaaaccggattccaaggaacggactgcagcgaagaagagaaa
tataccgaaggtctggcacacctgatgatgggcgaccaagggcagagaggggaaacttgg
cttctaaggtccctactcagcattcaagggaaagaagagtatgttgcaaccttcaaagga
tctgagttcttctgttacgacttgtccttgaacccaattcaaagcagcagcgatgaaatc
acattgtcattcaaaaccctccagaggaatggactgatgctgcacaccggcaaatcggcc
gactacgtcaacctggcattgaaaaatggagccgtgtctctcgtcattaatttggggtct
ggagcctttgaagctctggtggagccagtcaatgggaaatttaatgacaatgattggcat
gatgtcaaagtaacaaggaatctacgtcagcactcaggcattggacacgctatggtaaca
atatctgttgacggaattctgacgactacgggatatacgcaagaggactacaccatgctt
ggctccgatgattttttctacgttggagggagtccgagcacagcggacctgcctggatct
ccagttagcaacaacttcatgggctgcctcaaagaggttgtgtataaaaacaatgatgta
agacttgagctatcaaggctggccaagcagggagatcccaagatgaagctacatggtact
gtggccttcaagtgtgagaatgtggccactttggaccccattacttttgagacacccgag
tctttcatcgtcctcaacaagtggaatgcgaagaagacaggctccatctcatttgacttc
cgtaccacagagccaaacgggctcctcctcttcagccatggcaagccaaagcagcagcag
aaggattctaaaagtccccagatcctcaaagtggacttctttgccattgagatgctggat
ggccacctgtatctgctgctcgacatgggctcagggactacaaagaccaaggcagtcaac
aagaaggtcaatgatggcgagtggtaccacgtggacttccaacgagacggaagatctggt
accatctctatcaacaccctccgaactgcctatacagcccctggagagagtgaaattctg
gacttggatgatcatctttaccttgggggcctgcctgagaacaaaatgggcctggtgttc
cccactgaggtgtggacagctctgcttaactacggttacgttggctgcattcgggatcta
tttattgatggacagagtaaagatgtacggcgtctggctgaaattcagaaggctgctgga
gtcaagccttcgtgctccaaggagcctcccaaacagtgtttgagcaatccttgtcaaaac
aacggcatctgcagggaaggctggaaccgatatgtgtgcgactgctctggtactggatac
ctgggtcgctcttgtgaaagagaggcgacggtcctcagctacgacggcagcaagtttatg
aaggtccagctgccggtggtgatgcacaccgaagctgaagatgtttcgatgcgcttccga
tcccagcgagcctatggtatcctaatcgccaccacctctcgggactctgccgacaccctg
cgtctggagctggagagcggccgcgtccggctgactgtcaatttagattgtgtcaggata
aactgtacctccagcaaaggtccagaaactatttttgcgggtcagaatctgaacgataat
gagtggcacacagtgcgtgtcttcaggaggggaaagaatttgacactgaccgtagatgat
ctgacaccagttgaaggtcaaatggccggtgaccacacccaactggagttccacaacatt
gagacaggcatcgtgacggagaagcgcttcatgtccatggtgccgtccaatttcattggt
caccttcaaagcctgtctttcaatggcatggcctacatagacttgtgtaaaaatggcgac
atcgactactgtgagctcaacgccatgatcggcttcaagaacatcatcgctgatcctgtc
accttcaagtcgcgctccagcttcgtgaccctcactgctcttcaggcttactactccatg
caccttttctttcagtttaagaccacctcttccgatggcctcatcctctataacagtggg
gatgggaatgacttcattgtggtggagctggtcaaaggatacctgcactatgtgtcagac
ctgggaaatggagcccatttgattaaaggcaactccaacaggcctctcaatgacaacaac
tggcacagcgtcatcatctccagagatgccaacaacctccacatggtcaagattgatacc
aagattaccacccagaccaccacaggcgccaaaaacctggacttaaagggtaacctttac
attggtggagttgccaaggagatgtacaaagaactgcccaaactggtgcacgccaaggag
ggctttcaaggttgtttggcatcagtggatctgaatggccgcctccctgacctgatgtca
gatgcgttggaatgtgtgggacaaattgaaaggggatgtgaaggccccagcaccacatgc
caggaagactcctgcgccaaccagggagtgtgtcttcaacagtgggagggcttcagctgt
gactgcagcatgacgacgtttggtggacctctgtgtaatgatgctggaacaacgtacata
ttcgggcgagatggcggtatcatcacatacacgtggccgccaaacgaccggcccagcaca
agggcagaccggctagcaattggcttcagcactcacctaaaggacgccgtcctggtgagg
gtggatagctcctctggtcttggagacttcttgaaactgcacatcgaaagaggaaacatt
gctgttgtgtttaatgttggaacagatgacattaacatagaggagacgtcaaagtttgta
aacgatggaaaataccacatagtcaagtttacaaggagtgggggtaatgccactctccag
ttggacgatctacccgtcattgagcgctacccccaaggcaacaatgataacgaacgcctg
gcgattgctagacagcgaatcccattccgacttggtcgagtagttgacgaatggctactc
gacaaagggcggcagctgactatcttcaacagccaaacaactatacagattggtggctgg
gagcgagaccggactagatcctttcagggccagctttcaggcctctactataatggcctg
aaagtgttcaacatggccgcagagggagaccccaacattaagatccaaggcagtgcgcgg
cttgtaggggagtcgccttcccctataactccacagtcaagtactacagccaatcggtcc
gaaacatccacaactataatggagctcaccaccaccactgcatccagtcgccgagtcaaa
cagacgacaccacgagagcctcagcagacaagcgaggacatgcttgtggcatcggcagag
tgtccaagcgatgatgaggacatcgatccctgtgagccgagctcaggtgggttagccaat
cccacgggtgctggaccaaagggtttcccggactcctcggaggtcttccgcgagtccagc
agtactacaggcatggtggtgggcatcgtagcagccgcagctctgtgcattctcatcctg
ctctacgccatgtacaagtaccgcaatcgagacgagggttcctaccacgtggacgagagt
cgcaactacatcagcaactcggctcagtcaaacggttcgattgtcaaagagaaagcggtc
aaccccgcaaagacttgcagcaagaacaagaagaacaaggataaggagtactatgtgtga
DBGET
integrated database retrieval system