KEGG   Hippocampus comes (tiger tail seahorse): 109516326
Entry
109516326         CDS       T04969                                 
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109516326 (exosc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcq03019]
    109516326 (exosc7)
Messenger RNA biogenesis [BR:hcq03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109516326 (exosc7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     109516326 (exosc7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 109516326
NCBI-ProteinID: XP_019726351
UniProt: A0A3Q2YQV2
LinkDB
Position
Unknown
AA seq 290 aa
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVSLGHTAVLV
GIKAEIGKPRPMAPNEGYLEFFVDCSANATPEFEGRGGEELGKELSNTLYKVFNNKHSVD
LKKLCISKGEHCWVLYVDVLLLQCDGNLYDAMSVAIKAALFSTKIPKVHISNDEEGGKEI
ELSDDPFDCMRLDVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTVTCVR
KMGGGSLDPESIFEMTETGKRVGKALHVPLMKLLQQEESLGTRQKVGFLG
NT seq 873 nt   +upstreamnt  +downstreamnt
atggcaacagtacaagttagcgaagctgaaaaggtgtatattttacatggtataagggat
gacctgcgagtggatggaaggggctgtgaagactatagacacatggagattgagaccgac
gtggtgtccaatactgacggatcagccaaagtttctctgggccacacagcagttctagtg
ggaattaaggcggaaataggaaaaccgaggcccatggccccaaatgaaggctatttggag
ttctttgttgattgttcagcgaacgcaactccagaatttgaggggcgaggaggggaggaa
ctcgggaaggagctgagcaacacactgtacaaagtcttcaacaataagcacagcgtggac
ctgaagaagctgtgtatcagtaagggagaacactgctgggtgctctatgtggatgtactg
ctcctacaatgtgatggaaacctgtatgatgccatgtcagtagctatcaaggcagctctc
tttagcaccaaaatccccaaggtgcacatatcaaacgatgaagaaggagggaaggaaatt
gagctgtcagatgaccccttcgactgcatgagactcgacgtagagaatgttccctgtata
gtgacattgtgcaaggtgggccacaggcacgtggtggacgccactctgcaagagaaggcg
tgctccgtggccagcctcatcatttcagtcacacacaagggaacggtcacctgtgtgagg
aagatgggcggaggtagcctggaccctgagagcatctttgaaatgactgaaacaggtaaa
cgtgttggaaaagccctccacgtgcctctcatgaagctgctgcagcaggaggagagttta
ggaacgagacagaaagtgggctttcttggttag

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