Hippocampus comes (tiger tail seahorse): 109516326
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Entry
109516326 CDS
T04969
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109516326 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109516326 (exosc7)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109516326 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
109516326 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109516326
NCBI-ProteinID:
XP_019726351
UniProt:
A0A3Q2YQV2
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVSLGHTAVLV
GIKAEIGKPRPMAPNEGYLEFFVDCSANATPEFEGRGGEELGKELSNTLYKVFNNKHSVD
LKKLCISKGEHCWVLYVDVLLLQCDGNLYDAMSVAIKAALFSTKIPKVHISNDEEGGKEI
ELSDDPFDCMRLDVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTVTCVR
KMGGGSLDPESIFEMTETGKRVGKALHVPLMKLLQQEESLGTRQKVGFLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtacaagttagcgaagctgaaaaggtgtatattttacatggtataagggat
gacctgcgagtggatggaaggggctgtgaagactatagacacatggagattgagaccgac
gtggtgtccaatactgacggatcagccaaagtttctctgggccacacagcagttctagtg
ggaattaaggcggaaataggaaaaccgaggcccatggccccaaatgaaggctatttggag
ttctttgttgattgttcagcgaacgcaactccagaatttgaggggcgaggaggggaggaa
ctcgggaaggagctgagcaacacactgtacaaagtcttcaacaataagcacagcgtggac
ctgaagaagctgtgtatcagtaagggagaacactgctgggtgctctatgtggatgtactg
ctcctacaatgtgatggaaacctgtatgatgccatgtcagtagctatcaaggcagctctc
tttagcaccaaaatccccaaggtgcacatatcaaacgatgaagaaggagggaaggaaatt
gagctgtcagatgaccccttcgactgcatgagactcgacgtagagaatgttccctgtata
gtgacattgtgcaaggtgggccacaggcacgtggtggacgccactctgcaagagaaggcg
tgctccgtggccagcctcatcatttcagtcacacacaagggaacggtcacctgtgtgagg
aagatgggcggaggtagcctggaccctgagagcatctttgaaatgactgaaacaggtaaa
cgtgttggaaaagccctccacgtgcctctcatgaagctgctgcagcaggaggagagttta
ggaacgagacagaaagtgggctttcttggttag
DBGET
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